version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 200 51.25 0 217778..218218 + 146 197251223 - SeAg_B0212 - PTS system, IIA component 201 50.74 0 218286..219509 + 407 197248288 - SeAg_B0213 - polysaccharide deacetylase 202 53.81 0 219516..219896 - 126 197250616 panD SeAg_B0214 - aspartate 1-decarboxylase 203 55.56 0 219991..220845 - 284 197249991 panC SeAg_B0215 - pantoate--beta-alanine ligase 204 57.45 0 220971..221762 - 263 197248812 panB SeAg_B0216 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 205 58.13 +1 221883..222362 - 159 197250359 folK SeAg_B0217 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 206 56.63 0 222359..223723 - 454 197249173 - SeAg_B0218 - poly(A) polymerase (PAP) (Plasmid copy number protein) 207 57.75 0 223918..224859 - 313 197248628 - SeAg_B0219 - glutamyl-Q tRNA 208 53.73 0 224883..225338 - 151 197248103 dksA SeAg_B0220 - RNA polymerase-binding protein DksA 209 50.50 0 225515..226219 - 234 197248142 sfsA SeAg_B0221 - sugar fermentation stimulation protein 210 62.71 +1 226236..226766 - 176 197251638 - SeAg_B0222 - 2'-5' RNA ligase 211 59.31 +1 226794..229268 + 824 197247716 hrpB SeAg_B0223 - ATP-dependent helicase HrpB 212 50.33 0 229270..229422 + 50 197250706 - SeAg_B0224 - hypothetical protein 213 56.76 0 229409..231931 + 840 197251303 mrcB SeAg_B0225 - penicillin-binding protein 1B 214 39.72 -1 232070..232210 - 46 197250161 - SeAg_B0226 - hypothetical protein 215 51.56 0 232224..234467 + 747 197250727 fhuA SeAg_B0227 - ferrichrome-iron receptor 216 59.15 +1 234516..235313 + 265 197248095 fhuC SeAg_B0228 - ferrichrome ABC transporter, ATP-binding protein 217 59.26 +1 235313..236203 + 296 197248555 - SeAg_B0229 - ferrichrome-binding periplasmic protein 218 61.03 +1 236200..238257 + 685 197247572 - SeAg_B0230 - ferrichrome transport system permease protein FhuB 219 26.50 -2 238894..239010 + 38 197250708 - SeAg_B0231 - hypothetical protein 220 52.41 0 239198..239758 + 186 197248071 - SeAg_B0232 - putative fimbrial subunit 221 55.27 0 239844..242501 + 885 197247605 - SeAg_B0233 - fimbrial usher protein 222 53.92 0 242519..243271 + 250 197248634 - SeAg_B0234 - chaperone protein PapD 223 55.56 0 243290..243802 + 170 197248086 - SeAg_B0235 - putative minor fimbrial subunit 224 48.22 0 243799..244275 + 158 197249909 - SeAg_B0236 - fimbrial subunit 225 55.56 0 244275..244805 + 176 197249314 - SeAg_B0237 - minor fimbrial subunit StfG 226 51.06 0 244802..245647 + 281 197250557 - SeAg_B0238 - hypothetical protein 227 58.86 +1 245746..247026 - 426 197250049 hemL SeAg_B0239 - glutamate-1-semialdehyde-2,1-aminomutase 228 57.38 0 247196..248617 + 473 197248672 - SeAg_B0241 - H(+)/Cl(-) exchange transporter ClcA (ClC-ec1) 229 50.72 0 248699..249043 + 114 197248019 yadR SeAg_B0242 - iron-sulfur cluster assembly accessory protein YadR 230 53.50 0 249298..250284 + 328 197247385 - SeAg_B0243 - invertase 231 56.41 0 250355..250978 - 207 197249447 - SeAg_B0244 - inner membrane protein YadS 232 55.43 0 251015..251815 - 266 197248660 - SeAg_B0245 - cobalamin periplasmic binding protein 233 56.94 0 251808..252506 - 232 197250711 mtnN SeAg_B0246 - MTA/SAH nucleosidase 234 49.04 0 252549..254108 + 519 197249964 dgt SeAg_B0247 - deoxyguanosinetriphosphate triphosphohydrolase 235 54.14 0 254229..255665 + 478 197250860 degP SeAg_B0248 - protease Do 236 55.01 0 255818..256975 + 385 197251250 - SeAg_B0249 - carbohydrate diacid regulator 237 46.25 0 257064..257450 - 128 197247544 - SeAg_B0250 - protein YaeH 238 51.31 0 257697..258998 + 433 197251680 - SeAg_B0251 - shikimate transporter 239 53.58 0 259034..259858 - 274 197248248 dapD SeAg_B0252 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 240 56.04 0 259888..262560 - 890 197248735 glnD SeAg_B0253 - protein-P-II uridylyltransferase 241 52.58 0 262798..263592 - 264 197249306 map SeAg_B0254 - methionine aminopeptidase, type I 242 51.10 0 264043..264768 + 241 197249787 rpsB SeAg_B0256 - ribosomal protein S2 243 52.58 0 265026..265877 + 283 197250881 tsf SeAg_B0257 - translation elongation factor Ts 244 53.86 0 266022..266747 + 241 197251322 pyrH SeAg_B0258 - UMP kinase 245 51.08 0 266894..267451 + 185 197251811 frr SeAg_B0259 - ribosome releasing factor 246 55.22 0 267506..268789 + 427 197247719 dxr SeAg_B0260 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 247 51.12 0 269102..269860 + 252 197248928 uppS SeAg_B0261 - di-trans,poly-cis-decaprenylcistransferase 248 52.91 0 269873..270730 + 285 197249050 cdsA1 SeAg_B0262 - phosphatidate cytidylyltransferase 249 53.14 0 270742..272094 + 450 197249547 rseP SeAg_B0263 - RIP metalloprotease RseP 250 52.69 0 272126..274537 + 803 197249707 yaeT SeAg_B0265 - outer membrane protein assembly complex, YaeT protein 251 47.33 0 274660..275145 + 161 197250496 skp SeAg_B0266 - chaperone protein Skp 252 52.05 0 275149..276174 + 341 197251563 lpxD SeAg_B0267 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 253 52.41 0 276280..276735 + 151 197248328 fabZ SeAg_B0268 - beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 254 53.49 0 276739..277527 + 262 197249032 lpxA SeAg_B0269 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 255 56.31 0 277527..278675 + 382 197249560 lpxB SeAg_B0270 - lipid-A-disaccharide synthase 256 55.61 0 278672..279268 + 198 197249555 rnhB SeAg_B0271 - ribonuclease HII 257 55.99 0 279292..282774 + 1160 197251652 dnaE SeAg_B0272 - DNA polymerase III, alpha subunit 258 55.31 0 282787..283746 + 319 197251467 accA SeAg_B0273 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 259 55.56 0 283926..285689 + 587 197250206 - SeAg_B0274 - endochitinase 260 52.05 0 285765..287906 + 713 197248168 - SeAg_B0275 - lysine decarboxylase, constitutive 261 52.05 0 287962..288351 + 129 197251017 - SeAg_B0276 - glyoxylase family protein 262 59.16 +1 288414..289706 + 430 197249380 - SeAg_B0277 - tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) 263 45.13 -1 289790..289984 - 64 197248247 rof SeAg_B0278 - rof protein 264 49.75 0 290037..290237 - 66 197248965 - SeAg_B0279 - hypothetical protein 265 55.68 0 290435..290980 + 181 197249612 - SeAg_B0280 - hypothetical protein 266 55.32 0 290977..291399 + 140 197251225 - SeAg_B0281 - peptidyl-tRNA hydrolase domain protein 267 54.56 0 291431..292132 + 233 197250768 - SeAg_B0282 - copper homeostasis protein CutF 268 54.62 0 292206..293924 - 572 197250542 proS SeAg_B0283 - prolyl-tRNA synthetase 269 55.79 0 294035..294742 - 235 197248890 - SeAg_B0284 - hypothetical protein 270 54.57 0 294739..295143 - 134 197251683 rcsF SeAg_B0285 - exopolysaccharide synthesis regulator RcsF 271 48.65 0 295262..296077 - 271 197249920 metQ SeAg_B0286 - D-methionine ABC transporter, periplasmic D-methionine-binding lipoprotein 272 53.82 0 296116..296769 - 217 197248391 metI SeAg_B0287 - D-methionine ABC transporter, permease protein 273 52.52 0 296762..297793 - 343 197251181 metN SeAg_B0288 - D-methionine ABC transporter, ATP-binding protein 274 52.03 0 297983..298549 + 188 197247442 - SeAg_B0289 - D,D-heptose 1,7-bisphosphate phosphatase 275 36.75 -2 300794..300910 + 38 197249806 - SeAg_B0294 - hypothetical protein 276 50.91 0 304680..305504 + 274 197249948 dkgB SeAg_B0299 - 2,5-didehydrogluconate reductase B 277 51.26 0 305526..306440 - 304 197251911 - SeAg_B0300 - LysR substrate binding domain protein 278 56.38 0 306545..307720 + 391 197249125 - SeAg_B0301 - inner membrane transport protein YdhP 279 53.93 0 307852..308652 + 266 197248605 - SeAg_B0302 - protein YafD 280 52.40 0 308730..309500 + 256 197249338 - SeAg_B0303 - methyltransferase, UbiE/COQ5 family 281 52.19 0 309556..310923 - 455 197248631 mltD SeAg_B0304 - membrane-bound lytic murein transglycosylase D 282 43.65 -1 310995..311750 - 251 197248280 gloB SeAg_B0305 - hydroxyacylglutathione hydrolase 283 50.35 0 311785..312507 + 240 197251859 - SeAg_B0306 - putative methyltransferase 284 50.43 0 312504..312971 - 155 197247626 rnhA SeAg_B0307 - ribonuclease HI 285 51.96 0 313026..313766 + 246 197248793 dnaQ SeAg_B0308 - DNA polymerase III, epsilon subunit 286 52.07 0 314139..314501 + 120 197251773 - SeAg_B0310 - integrase 287 49.48 0 314557..314748 - 63 197251106 - SeAg_B0311 - hypothetical protein 288 62.59 +1 314876..315145 - 89 197250743 - SeAg_B0312 - DNA-binding prophage protein 289 43.21 -1 315805..316290 + 161 197250115 - SeAg_B0313 - type VI secretion system Vgr family protein 290 65.37 +2 317558..317944 + 128 197250136 - SeAg_B0315 - putative cytoplasmic protein 291 48.58 0 317971..318357 + 128 197249237 - SeAg_B0316 - probable secreted protein 292 28.63 -2 318627..318860 + 77 197248744 - SeAg_B0317 - hypothetical protein 293 53.88 0 318927..319184 - 85 197248183 - SeAg_B0318 - hypothetical protein 294 65.83 +2 319246..319365 + 39 197247678 - SeAg_B0319 - hypothetical protein 295 40.40 -1 320312..320509 + 65 197250282 - SeAg_B0321 - hypothetical protein 296 30.13 -2 320628..321095 + 155 197248307 - SeAg_B0322 - hypothetical protein 297 40.88 -1 321714..321872 + 52 197248240 - SeAg_B0324 - hypothetical protein 298 52.48 0 322136..322276 - 46 197250929 - SeAg_B0326 - hypothetical protein 299 34.13 -2 323451..323576 + 41 197250194 - SeAg_B0328 - hypothetical protein 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0