version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1801 48.41 0 1868341..1869474 + 377 197247496 - SeAg_B1920 - MscS Mechanosensitive ion channel 1802 57.19 0 1869556..1870146 - 196 197251592 - SeAg_B1921 - ATP-binding protein of ABC transport system 1803 55.14 0 1870140..1870937 - 265 197249346 - SeAg_B1922 - ABC nickel/di-oligopepetide transporter, ATP binding subunit 1804 56.46 0 1870931..1871743 - 270 197248667 - SeAg_B1923 - ABC nickel/di-oligopepetide transporter, permease subunit 1805 53.64 0 1871733..1872707 - 324 197250041 - SeAg_B1924 - ABC-type dipeptide/oligopeptide/nickel transporter, permease component 1806 53.21 0 1872707..1874341 - 544 197249455 - SeAg_B1925 - nickel ABC transporter, periplasmic nickel-binding protein 1807 39.68 -1 1874509..1874634 + 41 197250757 - SeAg_B1926 - hypothetical protein 1808 41.59 -1 1875023..1875337 + 104 197249712 - SeAg_B1927 - hypothetical protein 1809 47.83 0 1875486..1876016 + 176 197251874 - SeAg_B1928 - nickel-dependent hydrogenase, B-type cytochrome subunit 1810 50.57 0 1876099..1877142 - 347 197251200 - SeAg_B1929 - putative cytoplasmic protein 1811 45.65 0 1877481..1877951 - 156 197250574 - SeAg_B1930 - heat shock protein 1812 43.68 -1 1878268..1878441 + 57 197249947 - SeAg_B1931 - hypothetical protein 1813 38.89 -1 1878573..1878698 - 41 197251869 - SeAg_B1932 - hypothetical protein 1814 41.74 -1 1879076..1879420 + 114 197251277 - SeAg_B1933 - putative periplasmic protein 1815 43.37 -1 1880656..1881213 - 185 197247998 - SeAg_B1936 - virulence membrane protein PagC 1816 43.41 -1 1881594..1881722 - 42 197247384 - SeAg_B1937 - hypothetical protein 1817 30.73 -2 1881781..1881972 - 63 197249333 - SeAg_B1938 - hypothetical protein 1818 42.42 -1 1882021..1882284 + 87 197248695 - SeAg_B1939 - virulence protein PagD 1819 45.02 -1 1883046..1883567 + 173 197251791 - SeAg_B1940 - EnvE 1820 46.67 0 1883758..1883997 + 79 197250082 - SeAg_B1941 - hypothetical protein 1821 39.80 -1 1884486..1885274 + 262 197247354 - SeAg_B1942 - EnvF 1822 26.67 -2 1886505..1886654 + 49 197248809 - SeAg_B1944 - putative inner membrane protein 1823 38.58 -2 1886925..1888049 - 374 197249299 - SeAg_B1945 - putative bacteriophage protein 1824 51.64 0 1888507..1889757 - 416 197250028 icd SeAg_B1946 - isocitrate dehydrogenase, NADP-dependent 1825 51.36 0 1889857..1890594 + 245 197250532 - SeAg_B1947 - ribosomal large subunit pseudouridine synthase E 1826 51.21 0 1890591..1890920 + 109 197250138 - SeAg_B1948 - putative secreted protein 1827 51.52 0 1890932..1891393 + 153 197250524 - SeAg_B1949 - hydrolase, NUDIX family 1828 54.29 0 1891447..1892553 + 368 197249278 trmU SeAg_B1950 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1829 55.92 0 1892640..1893281 + 213 197248563 - SeAg_B1951 - hypothetical protein 1830 51.71 0 1893285..1894655 + 456 197247372 purB SeAg_B1952 - adenylosuccinate lyase 1831 51.56 0 1894779..1895453 + 224 197251572 - SeAg_B1953 - transcriptional regulatory protein PhoP 1832 52.19 0 1895453..1896916 + 487 197248978 - SeAg_B1954 - sensor protein PhoQ 1833 55.88 0 1896997..1898118 + 373 197248001 - SeAg_B1955 - cupin family protein 1834 47.19 0 1898158..1899492 - 444 197250779 - SeAg_B1956 - putative periplasmic protein 1835 52.28 0 1899496..1900725 - 409 197250100 pepT SeAg_B1957 - peptidase T 1836 49.60 0 1900976..1902112 + 378 197251727 potA SeAg_B1958 - spermidine/putrescine ABC transporter, ATP-binding protein 1837 50.72 0 1902126..1902959 + 277 197251090 - SeAg_B1959 - spermidine/putrescine transport system permease protein PotB 1838 40.45 -1 1903288..1904298 + 336 197251432 - SeAg_B1960 - secreted effector protein 1839 51.92 0 1904614..1905393 + 259 197247382 - SeAg_B1961 - spermidine/putrescine ABC transporter membrane component 1840 51.67 0 1905418..1906464 + 348 197247985 - SeAg_B1962 - spermidine/putrescine-binding periplasmic protein 1841 53.16 0 1906546..1907367 - 273 197248811 npdA SeAg_B1963 - NAD-dependent deacetylase 1842 56.58 0 1907386..1908297 - 303 197249999 nagK SeAg_B1964 - N-acetylglucosamine kinase 1843 53.82 0 1908326..1909570 - 414 197250638 lolE SeAg_B1965 - lipoprotein releasing system, transmembrane protein LolE 1844 55.13 0 1909570..1910271 - 233 197251293 lolD SeAg_B1966 - lipoprotein releasing system, ATP-binding protein 1845 55.17 0 1910264..1911463 - 399 197251806 lolC SeAg_B1967 - lipoprotein-releasing system transmembrane protein LolC 1846 45.91 0 1911637..1911795 - 52 197250011 - SeAg_B1968 - hypothetical protein 1847 56.89 0 1911801..1915247 + 1148 197250617 mfd SeAg_B1969 - transcription-repair coupling factor 1848 56.42 0 1915395..1916360 + 321 197251546 - SeAg_B1970 - LysM domain/ErfK/YbiS/YcfS/YnhG family protein 1849 54.26 0 1916457..1916714 - 85 197251779 - SeAg_B1971 - protein YcfR 1850 53.93 0 1916956..1917591 + 211 197251296 - SeAg_B1972 - transcriptional regulator, TetR family 1851 53.33 0 1917666..1918205 - 179 197248493 - SeAg_B1973 - surface antigen domain protein 1852 54.64 0 1918384..1919688 - 434 197247807 ndh SeAg_B1974 - NADH dehydrogenase 1853 47.88 0 1919942..1920484 - 180 197249195 - SeAg_B1975 - hypothetical protein 1854 56.73 0 1920509..1921534 - 341 197248771 nagZ SeAg_B1976 - beta-N-acetylhexosaminidase 1855 57.09 0 1921545..1922369 - 274 197250379 thiK SeAg_B1977 - thiamine kinase 1856 54.15 0 1922350..1922988 - 212 197250578 - SeAg_B1978 - hypothetical protein 1857 57.60 0 1923002..1923376 - 124 197249965 - SeAg_B1979 - putative outer membrane lipoprotein 1858 50.28 0 1923379..1923738 - 119 197248159 - SeAg_B1980 - HIT-like protein hinT 1859 52.78 0 1924080..1926254 + 724 197247500 - SeAg_B1981 - FhuE receptor 1860 55.02 0 1926327..1927760 - 477 197249202 ptsG SeAg_B1982 - PTS system, glucose-specific IIBC component 1861 44.20 -1 1927894..1928031 + 45 197248652 - SeAg_B1983 - hypothetical protein 1862 53.26 0 1928055..1928852 - 265 197250786 - SeAg_B1984 - hydrolase, TatD family protein 1863 58.91 +1 1928863..1929867 - 334 197250145 - SeAg_B1985 - DNA polymerase III subunit delta' 1864 57.63 0 1929864..1930505 - 213 197251767 tmk SeAg_B1986 - thymidylate kinase 1865 52.69 0 1930495..1931517 - 340 197251170 - SeAg_B1987 - hypothetical protein 1866 51.73 0 1931520..1932329 - 269 197250767 pabC SeAg_B1988 - aminodeoxychorismate lyase 1867 55.15 0 1932453..1933694 - 413 197250132 fabF SeAg_B1989 - 3-oxoacyl-[acyl-carrier-protein] synthase II 1868 47.68 0 1933780..1934016 - 78 197249406 acpP SeAg_B1990 - acyl carrier protein 1869 50.20 0 1934172..1934906 - 244 197249336 fabG SeAg_B1991 - 3-oxoacyl-[acyl-carrier-protein] reductase 1870 56.45 0 1934919..1935848 - 309 197250741 fabD SeAg_B1992 - malonyl CoA-acyl carrier protein transacylase 1871 54.51 0 1935864..1936817 - 317 197251236 fabH SeAg_B1993 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 1872 53.52 0 1936897..1937976 - 359 197251416 plsX SeAg_B1995 - fatty acid/phospholipid synthesis protein PlsX 1873 51.85 0 1937945..1938349 + 134 197248130 - SeAg_B1994 - hypothetical protein 1874 51.72 0 1938335..1938856 - 173 197247893 - SeAg_B1996 - hypothetical protein 1875 55.38 0 1939054..1939638 + 194 197248674 maf SeAg_B1997 - septum formation protein Maf 1876 48.44 0 1939710..1939934 - 74 197250035 - SeAg_B1999 - hypothetical protein 1877 46.33 0 1940137..1940898 - 253 197250540 - SeAg_B2000 - putative inner membrane lipoprotein 1878 55.10 0 1941036..1941995 - 319 197249745 - SeAg_B2001 - ribosomal large subunit pseudouridine synthase C 1879 58.21 +1 1942569..1945772 + 1067 197250329 - SeAg_B2003 - ribonuclease E 1880 53.98 0 1946029..1946982 - 317 197248976 flgL SeAg_B2004 - flagellar hook-associated protein 3 1881 51.99 0 1946997..1948658 - 553 197249622 flgK SeAg_B2005 - flagellar hook-associated protein FlgK 1882 56.68 0 1948723..1949673 - 316 197249387 flgJ SeAg_B2006 - flagellar rod assembly protein/muramidase FlgJ 1883 58.01 0 1949673..1950770 - 365 197248292 flgI SeAg_B2007 - flagellar P-ring protein FlgI 1884 54.80 0 1950782..1951447 - 221 197248047 flgH SeAg_B2008 - flagellar L-ring protein FlgH 1885 56.45 0 1951535..1952317 - 260 197251031 flgG SeAg_B2009 - flagellar basal-body rod protein FlgG 1886 60.45 +1 1952331..1953086 - 251 197251378 flgF SeAg_B2010 - flagellar basal-body rod protein FlgF 1887 55.03 0 1953107..1954318 - 403 197250199 - SeAg_B2011 - flagellar hook protein FlgE 1888 54.79 0 1954345..1955043 - 232 197249054 - SeAg_B2012 - basal-body rod modification protein FlgD 1889 55.06 0 1955055..1955459 - 134 197250491 flgC SeAg_B2013 - flagellar basal-body rod protein FlgC 1890 52.52 0 1955463..1955879 - 138 197250045 flgB SeAg_B2014 - flagellar basal-body rod protein FlgB 1891 58.18 +1 1956036..1956695 + 219 197251473 - SeAg_B2015 - flagella basal body P-ring formation protein FlgA 1892 51.70 0 1956787..1957080 + 97 197250827 - SeAg_B2016 - negative regulator of flagellin synthesis 1893 54.71 0 1957115..1957507 + 130 197250431 - SeAg_B2017 - flagella synthesis protein FlgN 1894 54.16 0 1957589..1959163 - 524 197249902 mviN SeAg_B2018 - integral membrane protein MviN 1895 58.12 +1 1959428..1960351 - 307 197251370 - SeAg_B2019 - Virulence factor MviM homolog 1896 55.71 0 1960353..1961000 - 215 197250891 - SeAg_B2020 - protein YceH 1897 51.11 0 1961036..1961620 - 194 197251240 - SeAg_B2021 - ribosomal-protein-alanine acetyltransferase 1898 56.41 0 1961857..1963065 + 402 197251455 - SeAg_B2022 - multidrug resistance protein MdtH 1899 45.99 0 1963129..1963776 + 215 197248353 grxB SeAg_B2023 - glutaredoxin, GrxB family 1900 45.45 0 1963901..1964461 + 186 197247854 - SeAg_B2024 - putative lipoprotein 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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