version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 98 52.60 0 105767..108127 - 786 197250730 imp SeAg_B0102 - LPS-assembly protein 99 47.53 0 108137..108298 - 53 197250494 - SeAg_B0103 - hypothetical protein 100 54.00 0 108381..109193 + 270 197249861 - SeAg_B0104 - DnaJ domain protein 101 57.12 0 109288..109947 - 219 197250796 - SeAg_B0105 - pseudouridine synthase, RluA family 102 57.10 0 109959..112865 - 968 197248148 rapA SeAg_B0106 - RNA polymerase associated protein RapA 103 47.62 0 115435..115665 - 76 197247795 - SeAg_B0108 - putative secreted protein 104 46.99 0 117469..117966 - 165 197248860 - SeAg_B0110 - hypothetical protein 105 42.62 -1 118391..118810 + 139 197250479 - SeAg_B0111 - putative cytoplasmic protein 106 54.89 0 118816..119511 - 231 197249821 araD SeAg_B0112 - L-ribulose-5-phosphate 4-epimerase 107 55.42 0 119652..121154 - 500 197251437 araA SeAg_B0113 - L-arabinose isomerase 108 60.70 +1 121165..122874 - 569 197248443 araB SeAg_B0114 - L-ribulokinase 109 53.78 0 123215..124060 + 281 197247811 - SeAg_B0115 - arabinose operon regulatory protein 110 56.64 0 124179..124946 + 255 197249423 - SeAg_B0116 - inner membrane protein YabI 111 57.49 0 124985..125692 - 235 197248796 thiQ SeAg_B0117 - thiamine ABC transporter, ATP-binding protein 112 59.78 +1 125676..127286 - 536 197248623 thiP SeAg_B0118 - thiamine/thiamine pyrophosphate ABC transporter, permease protein 113 55.28 0 127262..128245 - 327 197250327 thiB SeAg_B0119 - thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein 114 56.67 0 128290..128409 - 39 197249885 - SeAg_B0121 - putative lipoprotein 115 56.90 0 128423..130081 - 552 197251499 sgrR SeAg_B0122 - sugar transport-related sRNA regulator SgrR 116 52.63 0 130498..130611 + 37 197251096 - SeAg_B0125 - hypothetical protein 117 52.81 0 130632..131237 - 201 197248436 leuD SeAg_B0126 - 3-isopropylmalate dehydratase, small subunit 118 58.96 +1 131248..132648 - 466 197247828 leuC SeAg_B0127 - 3-isopropylmalate dehydratase, large subunit 119 55.95 0 132651..133742 - 363 197249188 leuB SeAg_B0128 - 3-isopropylmalate dehydrogenase 120 55.41 0 133742..135313 - 523 197248574 leuA SeAg_B0129 - 2-isopropylmalate synthase 121 46.88 0 136063..137088 + 341 197251410 - SeAg_B0131 - probable HTH-type transcriptional regulator LeuO 122 54.47 0 137380..139134 + 584 197248826 ilvB SeAg_B0132 - acetolactate synthase, large subunit, biosynthetic type 123 53.94 0 139134..139628 + 164 197248052 ilvH SeAg_B0133 - acetolactate synthase, small subunit, isozyme III 124 57.72 0 139618..139740 - 40 197248162 - SeAg_B0134 - hypothetical protein 125 56.62 0 139912..140916 + 334 197247480 fruR SeAg_B0135 - fructose repressor 126 51.85 0 141522..141980 + 152 197249345 mraZ SeAg_B0136 - mraZ protein 127 56.48 0 141982..142923 + 313 197248687 mraW SeAg_B0137 - S-adenosyl-methyltransferase MraW 128 52.19 0 142920..143285 + 121 197250573 ftsL SeAg_B0138 - cell division protein FtsL 129 54.90 0 143301..145067 + 588 197249986 ftsI SeAg_B0139 - peptidoglycan synthetase FtsI 130 59.07 +1 145054..146541 + 495 197251914 murE SeAg_B0140 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 131 56.59 0 146538..147896 + 452 197251461 murF SeAg_B0141 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 132 54.02 0 147890..148972 + 360 197248344 mraY SeAg_B0142 - phospho-N-acetylmuramoyl-pentapeptide-transferase 133 58.62 +1 148975..150291 + 438 197248149 murD SeAg_B0143 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 134 54.70 0 150291..151535 + 414 197248187 ftsW SeAg_B0144 - cell division protein FtsW 135 61.14 +1 151532..152599 + 355 197250832 murG SeAg_B0145 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 136 56.57 0 152718..154193 + 491 197247646 murC SeAg_B0146 - UDP-N-acetylmuramate--alanine ligase 137 54.40 0 154186..155106 + 306 197247549 ddlB SeAg_B0147 - D-alanine--D-alanine ligase B 138 52.35 0 155108..155938 + 276 197249004 ftsQ SeAg_B0148 - cell division protein FtsQ 139 53.44 0 155935..157197 + 420 197249642 ftsA SeAg_B0149 - cell division protein FtsA 140 57.03 0 157258..158409 + 383 197249720 ftsZ SeAg_B0150 - cell division protein FtsZ 141 50.76 0 158510..159427 + 305 197249844 lpxC SeAg_B0151 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 142 53.92 0 160265..162970 + 901 197248857 secA SeAg_B0153 - preprotein translocase, SecA subunit 143 51.52 0 163122..163517 + 131 197250671 - SeAg_B0154 - mutator MutT protein 144 54.14 0 163551..164540 - 329 197247778 - SeAg_B0155 - aldo-keto reductase yakc (NADP+) 145 51.73 0 164644..165567 + 307 197247928 - SeAg_B0156 - transcriptional regulator, LysR family 146 55.21 0 165564..165755 - 63 197248595 - SeAg_B0157 - zinc-binding protein YacG 147 52.69 0 165765..166508 - 247 197247589 - SeAg_B0158 - hypothetical protein 148 55.07 0 166508..167128 - 206 197251746 coaE SeAg_B0160 - dephospho-CoA kinase 149 53.26 0 167354..168397 + 347 197250913 guaC SeAg_B0161 - guanosine monophosphate reductase 150 54.36 0 168428..169630 - 400 197250502 - SeAg_B0162 - protein transport protein HofC 151 55.19 0 169620..171005 - 461 197250845 - SeAg_B0163 - protein transport protein HofB 152 53.88 0 171015..171452 - 145 197251731 - SeAg_B0164 - prepilin peptidase dependent protein D 153 56.62 0 171674..172609 - 311 197247687 nadC SeAg_B0165 - nicotinate-nucleotide diphosphorylase 154 55.14 0 172655..173218 + 187 197248432 - SeAg_B0166 - N-acetyl-anhydromuramyl-L-alanine amidase 155 55.91 0 173215..174069 + 284 197248970 - SeAg_B0167 - AmpE protein 156 53.84 0 174161..175111 - 316 197249747 - SeAg_B0168 - alpha-N-arabinofuranosidase 2 157 50.53 0 175111..176517 - 468 197250232 - SeAg_B0170 - Na+/galactoside symporter 158 48.41 0 176471..176596 + 41 197249751 - SeAg_B0169 - hypothetical protein 159 55.80 0 176681..178051 - 456 197248136 - SeAg_B0171 - aromatic amino acid transport protein AroP 160 28.46 -2 178260..178382 + 40 197248679 - SeAg_B0172 - hypothetical protein 161 56.73 0 178617..179381 + 254 197249231 - SeAg_B0173 - transcriptional regulator, GntR family 162 54.39 0 179541..182204 + 887 197250339 aceE SeAg_B0174 - pyruvate dehydrogenase (acetyl-transferring), homodimeric type 163 55.61 0 182219..184108 + 629 197251001 aceF SeAg_B0175 - dihydrolipoyllysine-residue acetyltransferase 164 53.99 0 184306..185733 + 475 197251626 lpdA SeAg_B0176 - dihydrolipoamide dehydrogenase 165 40.00 -1 185820..185939 + 39 197248233 - SeAg_B0177 - hypothetical protein 166 56.84 0 186022..186306 + 94 197247645 - SeAg_B0178 - probable secreted protein 167 56.82 0 186344..187135 - 263 197248333 - SeAg_B0179 - probable secreted protein 168 56.93 0 187148..188770 - 540 197249020 - SeAg_B0180 - hypothetical protein 169 58.58 +1 189159..191756 + 865 197249635 acnB SeAg_B0181 - aconitate hydratase 2 170 46.30 0 191788..192759 - 323 197250230 - SeAg_B0182 - hypothetical protein 171 50.69 0 192832..193920 + 362 197250781 - SeAg_B0183 - hypothetical protein 172 44.34 -1 193945..194262 + 105 197251596 - SeAg_B0184 - hypothetical protein 173 53.80 0 194277..195209 - 310 197250897 - SeAg_B0185 - hypothetical protein 174 49.03 0 195284..196417 + 377 197251601 - SeAg_B0186 - hypothetical protein 175 50.56 0 196419..196598 + 59 197250964 - SeAg_B0187 - aconitate hydratase 176 42.15 -1 196638..197102 - 154 197248316 - SeAg_B0188 - hypothetical protein 177 53.70 0 197512..197835 - 107 197247695 - SeAg_B0189 - low molecular weight phosphotyrosine protein phosphatase 178 49.57 0 197807..197923 - 38 197249653 - SeAg_B0190 - hypothetical protein 179 52.07 0 198106..198468 + 120 197248881 - SeAg_B0191 - protein YacL 180 38.60 -2 198511..198624 + 37 197250755 - SeAg_B0192 - hypothetical protein 181 57.65 0 198703..199656 + 317 197249954 - SeAg_B0193 - 2-keto-3-deoxygluconate permease 182 57.47 0 199653..200924 + 423 197250274 - SeAg_B0194 - putative inner membrane protein 183 55.59 0 200914..201897 + 327 197249801 pdxA SeAg_B0195 - 4-hydroxythreonine-4-phosphate dehydrogenase 184 54.95 0 201907..202674 + 255 197251561 - SeAg_B0196 - DeoR-family transcriptional regulator 185 49.56 0 202704..203498 - 264 197251032 speD SeAg_B0197 - S-adenosylmethionine decarboxylase proenzyme 186 53.54 0 203519..204379 - 286 197247727 speE SeAg_B0198 - spermidine synthase 187 47.40 0 204486..204812 - 108 197249269 - SeAg_B0199 - hypothetical protein 188 56.30 0 205035..206645 + 536 197249042 - SeAg_B0200 - blue copper oxidase CueO 189 57.75 0 206723..208966 - 747 197248607 gcd SeAg_B0201 - quinoprotein glucose dehydrogenase 190 50.47 0 209319..209855 + 178 197250856 hpt SeAg_B0202 - hypoxanthine phosphoribosyltransferase 191 50.08 0 209913..210575 - 220 197251379 - SeAg_B0203 - carbonate dehydratase 192 50.05 0 210684..211610 + 308 197251732 - SeAg_B0204 - ABC transporter, ATP-binding protein 193 54.86 0 211607..212377 + 256 197250507 - SeAg_B0205 - ABC transporter, permease protein 194 52.00 0 212486..213562 - 358 197248848 - SeAg_B0206 - putative fimbriae 195 55.32 0 213571..216117 - 848 197249470 - SeAg_B0207 - outer membrane usher protein FimD 196 52.78 0 216144..216827 - 227 197247820 - SeAg_B0208 - chaperone protein FimC 197 52.25 0 216875..217408 - 177 197248018 - SeAg_B0209 - putative fimbrial subunit 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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