version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1213 54.58 0 1269415..1270266 - 283 197250134 manZ SeAg_B1300 - PTS system, mannose-specific IID component 1214 56.18 0 1270279..1271079 - 266 197250485 manY SeAg_B1301 - PTS system, mannose-specific IIC component 1215 52.73 0 1271132..1272100 - 322 197248916 manX SeAg_B1302 - PTS system, mannose-specific IIAB component 1216 55.90 0 1272573..1274132 + 519 197248683 - SeAg_B1303 - membrane protein, TerC family/CBS/transporter associated domain protein 1217 54.46 0 1274154..1275578 - 474 197249364 - SeAg_B1304 - cyclic diguanylate phosphodiesterase (EAL) domain protein 1218 55.60 0 1275893..1277257 - 454 197247379 - SeAg_B1305 - L-serine ammonia-lyase 1219 58.55 +1 1277521..1278099 - 192 197247999 - SeAg_B1306 - hydrolase, nudix family 1220 55.31 0 1278103..1279467 - 454 197248790 pabB SeAg_B1307 - aminodeoxychorismate synthase, component I 1221 51.11 0 1279548..1279727 + 59 197249472 - SeAg_B1308 - hypothetical protein 1222 51.30 0 1279733..1280077 - 114 197248782 - SeAg_B1309 - endoribonuclease L-PSP family protein 1223 56.04 0 1280208..1282118 + 636 197249340 - SeAg_B1310 - hypothetical protein 1224 60.78 +1 1282176..1282871 + 231 197247413 - SeAg_B1311 - glycoprotease family protein 1225 55.67 0 1282943..1283524 + 193 197251262 slp SeAg_B1312 - outer membrane protein Slp 1226 37.20 -2 1283503..1283709 - 68 197247992 - SeAg_B1313 - hypothetical protein 1227 52.02 0 1283729..1285414 + 561 197251854 - SeAg_B1314 - long-chain-fatty-acid--CoA ligase 1228 55.67 0 1285487..1286614 + 375 197248423 rnd SeAg_B1316 - ribonuclease D 1229 43.82 -1 1286735..1287001 - 88 197247885 minE SeAg_B1317 - cell division topological specificity factor MinE 1230 51.66 0 1287005..1287817 - 270 197251567 minD SeAg_B1318 - septum site-determining protein MinD 1231 51.27 0 1287841..1288548 - 235 197251251 minC SeAg_B1319 - septum site-determining protein MinC 1232 43.55 -1 1288533..1288943 + 136 197250058 - SeAg_B1320 - protein YcgL 1233 52.88 0 1289017..1289676 + 219 197247927 - SeAg_B1321 - fumarylacetoacetate hydrolase family protein 1234 48.70 0 1289754..1290215 + 153 197248808 - SeAg_B1322 - protein YcgN 1235 50.00 0 1290567..1290704 + 45 197251844 - SeAg_B1323 - hypothetical protein 1236 45.98 0 1290897..1291070 + 57 197247935 - SeAg_B1324 - hypothetical protein 1237 51.46 0 1291141..1291482 - 113 197250553 - SeAg_B1325 - tellurite resistance protein TehB 1238 54.99 0 1291591..1292121 - 176 197251350 - SeAg_B1326 - oxido-reductase 1239 53.33 0 1292263..1293807 - 514 197251486 nhaB SeAg_B1327 - Na+/H+ antiporter NhaB 1240 52.22 0 1294027..1294746 + 239 197248451 fadR SeAg_B1328 - fatty acid metabolism transcriptional regulator FadR 1241 49.84 0 1294793..1296325 - 510 197250495 - SeAg_B1329 - SpoVR family protein 1242 56.51 0 1296648..1297946 + 432 197249818 - SeAg_B1330 - D-amino acid dehydrogenase small subunit 1243 57.14 0 1297960..1299030 + 356 197247858 alr SeAg_B1331 - alanine racemase 1244 54.73 0 1299093..1300826 - 577 197248214 - SeAg_B1332 - cell volume regulation protein A 1245 56.50 0 1300923..1301837 - 304 197250824 - SeAg_B1333 - muramoyltetrapeptide carboxypeptidase 1246 52.79 0 1302633..1303367 - 244 197249834 - SeAg_B1335 - YcgR family protein 1247 56.47 0 1303536..1303790 + 84 197250264 - SeAg_B1336 - transglycosylase associated protein 1248 55.52 0 1303853..1305565 - 570 197250839 - SeAg_B1337 - trehalase 1249 47.01 0 1305645..1305761 + 38 197251623 - SeAg_B1338 - hypothetical protein 1250 56.86 0 1305779..1307053 - 424 197249859 - SeAg_B1339 - glutamate dehydrogenase 1251 52.63 0 1307354..1307467 - 37 197248319 - SeAg_B1340 - hypothetical protein 1252 55.32 0 1307550..1308686 - 378 197250984 cydB SeAg_B1341 - cytochrome D ubiquinol oxidase, subunit II 1253 55.53 0 1308698..1310242 - 514 197251576 cydA SeAg_B1342 - cytochrome d ubiquinol oxidase, subunit I 1254 59.36 +1 1310317..1311165 - 282 197249796 - SeAg_B1343 - hydrogenase-1 operon protein HyaF 1255 58.02 0 1311162..1311566 - 134 197250153 - SeAg_B1344 - hydrogenase-1 operon protein HyaE 1256 57.79 0 1311556..1312152 - 198 197250366 hybD SeAg_B1345 - hydrogenase expression/formation protein 1257 55.19 0 1312149..1312880 - 243 197248917 cybH SeAg_B1346 - Ni/Fe-hydrogenase, B-type cytochrome subunit 1258 55.57 0 1312899..1314692 - 597 197248363 - SeAg_B1347 - hydrogenase-1 large chain 1259 56.37 0 1314689..1315834 - 381 197250876 - SeAg_B1348 - hydrogenase-1 small chain 1260 38.31 -2 1316302..1317567 + 421 197249170 - SeAg_B1349 - putative cytoplasmic protein 1261 29.96 -2 1318051..1318287 - 78 197249265 - SeAg_B1350 - hypothetical protein 1262 30.76 -2 1318545..1319165 - 206 197250013 - SeAg_B1351 - hypothetical protein 1263 41.03 -1 1319773..1319889 + 38 197250784 - SeAg_B1352 - hypothetical protein 1264 53.02 0 1319915..1321006 - 363 197251280 engD SeAg_B1353 - GTP-binding protein EngD 1265 51.62 0 1321123..1321707 - 194 197250918 pth SeAg_B1354 - peptidyl-tRNA hydrolase 1266 50.90 0 1321983..1322261 + 92 197249163 - SeAg_B1355 - hypothetical protein 1267 56.70 0 1322306..1323991 - 561 197247391 ychM SeAg_B1356 - sulfate permease 1268 54.54 0 1324116..1325063 - 315 197249386 prs SeAg_B1357 - ribose-phosphate pyrophosphokinase 1269 51.46 0 1325162..1325332 + 56 197250585 - SeAg_B1358 - hypothetical protein 1270 55.12 0 1325329..1326177 - 282 197247363 ispE SeAg_B1359 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1271 55.61 0 1326177..1326800 - 207 197248049 lolB SeAg_B1360 - outer membrane lipoprotein LolB 1272 45.74 0 1326818..1326946 + 42 197248719 - SeAg_B1361 - hypothetical protein 1273 56.88 0 1327114..1328370 + 418 197249373 hemA SeAg_B1362 - glutamyl-tRNA reductase 1274 57.62 0 1328411..1329493 + 360 197250213 prfA SeAg_B1363 - peptide chain release factor 1 1275 58.15 +1 1329493..1330326 + 277 197249709 hemK SeAg_B1364 - protein-(glutamine-N5) methyltransferase, release factor-specific 1276 51.79 0 1330323..1330712 + 129 197251201 - SeAg_B1365 - protein sirB2 1277 49.38 0 1330716..1331525 + 269 197251711 sirB1 SeAg_B1366 - sirB1 protein 1278 55.32 0 1331563..1332417 + 284 197248417 kdsA SeAg_B1367 - 3-deoxy-8-phosphooctulonate synthase 1279 50.86 0 1332471..1333571 - 366 197247705 - SeAg_B1368 - calcium/proton antiporter 1280 45.02 -1 1333838..1334068 + 76 197248572 - SeAg_B1369 - hypothetical protein 1281 52.26 0 1334148..1334501 - 117 197249238 - SeAg_B1370 - protein YchN 1282 48.15 0 1334517..1334678 + 53 197250421 - SeAg_B1371 - hypothetical protein 1283 53.68 0 1334678..1336102 + 474 197249922 - SeAg_B1372 - hypothetical protein 1284 53.46 0 1336103..1336753 - 216 197247808 narL SeAg_B1373 - nitrate/nitrite response regulator protein NarL 1285 53.69 0 1336746..1338587 - 613 197251850 - SeAg_B1374 - nitrate/nitrite sensor protein NarX 1286 54.29 0 1338883..1340280 + 465 197249092 - SeAg_B1375 - nitrite extrusion protein 1 1287 56.04 0 1340668..1344411 + 1247 197247994 narG SeAg_B1376 - nitrate reductase 1, alpha subunit 1288 55.86 0 1344408..1345943 + 511 197249326 narH SeAg_B1377 - nitrate reductase 1, beta subunit 1289 55.70 0 1345940..1346650 + 236 197248262 narJ SeAg_B1378 - nitrate reductase molybdenum cofactor assembly chaperone 1 1290 55.46 0 1346650..1347327 + 225 197250056 narI SeAg_B1379 - respiratory nitrate reductase, gamma subunit 1291 46.06 0 1347369..1347533 - 54 197249441 - SeAg_B1380 - hypothetical protein 1292 49.54 0 1347569..1349098 + 509 197249692 - SeAg_B1381 - tetratricopeptide repeat protein 1293 50.89 0 1350455..1351297 - 280 197250313 purU SeAg_B1389 - formyltetrahydrofolate deformylase 1294 48.72 0 1351348..1351854 - 168 197251485 - SeAg_B1390 - protein YchJ 1295 50.77 0 1351917..1352822 + 301 197247512 - SeAg_B1391 - phospholipase, patatin family 1296 51.08 0 1353046..1354059 + 337 197248198 - SeAg_B1392 - response regulator receiver domain 1297 49.50 0 1354262..1355170 + 302 197248273 galU SeAg_B1393 - UTP-glucose-1-phosphate uridylyltransferase 1298 45.65 0 1355302..1355715 - 137 197250504 hns SeAg_B1394 - DNA-binding protein H-NS 1299 48.87 0 1356378..1356995 + 205 197249849 tdk SeAg_B1395 - thymidine kinase 1300 53.08 0 1357192..1359870 - 892 197248827 adhE SeAg_B1396 - aldehyde-alcohol dehydrogenase 1301 50.77 0 1360347..1360994 + 215 197250248 - SeAg_B1397 - hypothetical protein 1302 48.22 0 1361771..1363402 + 543 197249643 - SeAg_B1399 - periplasmic oligopeptide-binding protein 1303 51.03 0 1363524..1364444 + 306 197247698 oppB SeAg_B1400 - oligopeptide ABC transporter, permease protein OppB 1304 53.36 0 1364459..1365367 + 302 197251525 oppC SeAg_B1401 - oligopeptide ABC transporter, permease protein OppC 1305 52.48 0 1365379..1366386 + 335 197251725 oppD SeAg_B1402 - oligopeptide ABC transporter, ATP-binding protein OppD 1306 54.13 0 1366383..1367387 + 334 197249962 oppF SeAg_B1403 - oligopeptide ABC transporter, ATP-binding protein OppF 1307 48.03 0 1367435..1368271 + 278 197250728 - SeAg_B1404 - Ion transport protein 1308 54.00 0 1368682..1370142 - 486 197249127 - SeAg_B1406 - cardiolipin synthetase 1309 48.55 0 1370321..1370458 + 45 197249118 - SeAg_B1407 - hypothetical protein 1310 53.54 0 1370502..1370798 - 98 197249628 - SeAg_B1408 - protein YciI 1311 58.02 0 1371022..1371750 + 242 197249017 - SeAg_B1409 - protein TonB 1312 54.71 0 1371810..1372202 - 130 197250649 - SeAg_B1410 - acyl-CoA thioester hydrolase YciA 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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