version 1.0
Salmonella enterica subsp. enterica serovar Agona str. SL483, complete genome - 1..4798660 4562 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1175 52.06 0 1239731..1240408 + 225 197250759 - SeAg_B1258 - transposase, Mutator family 1176 43.54 -1 1240807..1240953 - 48 197249179 - SeAg_B1259 - hypothetical protein 1177 49.74 0 1241176..1241370 + 64 197247633 - SeAg_B1260 - hypothetical protein 1178 42.01 -1 1241482..1241919 + 145 197251127 - SeAg_B1261 - putative acetyltransferase 1179 48.81 0 1243060..1243479 - 139 197250000 - SeAg_B1264 - helix-turn-helix domain protein 1180 44.87 -1 1243476..1243787 - 103 197250236 - SeAg_B1265 - Sea40 1181 54.65 0 1243933..1244265 + 110 197248603 - SeAg_B1266 - hypothetical protein 1182 31.43 -2 1244564..1245508 - 314 197248235 - SeAg_B1267 - hypothetical protein 1183 58.00 0 1245709..1245858 - 49 197251625 - SeAg_B1268 - hypothetical cytosolic protein 1184 51.15 0 1246013..1246489 - 158 197249978 - SeAg_B1269 - hypothetical protein 1185 35.70 -2 1246818..1247198 - 126 197250601 - SeAg_B1270 - putative cytoplasmic protein 1186 42.42 -1 1247485..1247616 - 43 197250633 - SeAg_B1271 - hypothetical protein 1187 35.86 -2 1247610..1247846 - 78 197249322 - SeAg_B1272 - hypothetical protein 1188 41.40 -1 1247913..1248098 - 61 197247361 - SeAg_B1273 - hypothetical protein 1189 44.09 -1 1248156..1248620 + 154 197247986 - SeAg_B1274 - guanine nucleotide exchange factor SopE 1190 27.78 -2 1248694..1248819 + 41 197251180 - SeAg_B1275 - hypothetical protein 1191 48.48 0 1248905..1249069 + 54 197251820 - SeAg_B1276 - hypothetical protein 1192 41.38 -1 1249102..1249275 + 57 197250131 - SeAg_B1277 - hypothetical protein 1193 52.53 0 1249293..1249943 + 216 197248108 - SeAg_B1278 - serine/threonine-protein phosphatase 1 1194 48.89 0 1249962..1250096 - 44 197249868 - SeAg_B1279 - hypothetical protein 1195 50.83 0 1250264..1250503 - 79 197250478 - SeAg_B1280 - hypothetical protein 1196 54.72 0 1250618..1252057 - 479 197248818 - SeAg_B1281 - ribosomal RNA small subunit methyltransferase F 1197 54.75 0 1252135..1254768 - 877 197249500 - SeAg_B1282 - mce-related protein 1198 52.41 0 1254737..1256020 - 427 197247796 - SeAg_B1283 - integral membrane protein, PqiA family 1199 54.22 0 1256149..1256646 + 165 197248465 - SeAg_B1284 - GAF domain protein 1200 53.71 0 1256744..1257430 + 228 197251479 proQ SeAg_B1285 - ProP effector 1201 51.34 0 1257450..1259498 + 682 197247447 prc SeAg_B1286 - tail-specific protease 1202 53.17 0 1259692..1260573 + 293 197249143 - SeAg_B1287 - M48B family peptidase 1203 49.75 0 1262170..1262961 + 263 197248788 - SeAg_B1289 - transcriptional regulator KdgR 1204 52.50 0 1263173..1263412 - 79 197250804 - SeAg_B1290 - hypothetical protein 1205 43.75 -1 1263570..1263713 + 47 197248169 - SeAg_B1291 - hypothetical protein 1206 53.42 0 1263838..1264071 + 77 197249824 - SeAg_B1292 - hypothetical protein 1207 29.91 -2 1264297..1264413 + 38 197251146 - SeAg_B1293 - hypothetical protein 1208 47.14 0 1264876..1265085 + 69 197247963 cspC SeAg_B1294 - cold shock protein CspC 1209 52.75 0 1265305..1267050 + 581 197247470 - SeAg_B1295 - peptidoglycan synthetase FtsI 1210 56.54 0 1267116..1267925 + 269 197248232 - SeAg_B1296 - ribosomal RNA large subunit methyltransferase A 1211 53.26 0 1267922..1268488 - 188 197251261 - SeAg_B1297 - membrane protein YebN 1212 44.88 -1 1268898..1269356 - 152 197251730 - SeAg_B1299 - membrane protein YobD 1213 54.58 0 1269415..1270266 - 283 197250134 manZ SeAg_B1300 - PTS system, mannose-specific IID component 1214 56.18 0 1270279..1271079 - 266 197250485 manY SeAg_B1301 - PTS system, mannose-specific IIC component 1215 52.73 0 1271132..1272100 - 322 197248916 manX SeAg_B1302 - PTS system, mannose-specific IIAB component 1216 55.90 0 1272573..1274132 + 519 197248683 - SeAg_B1303 - membrane protein, TerC family/CBS/transporter associated domain protein 1217 54.46 0 1274154..1275578 - 474 197249364 - SeAg_B1304 - cyclic diguanylate phosphodiesterase (EAL) domain protein 1218 55.60 0 1275893..1277257 - 454 197247379 - SeAg_B1305 - L-serine ammonia-lyase 1219 58.55 +1 1277521..1278099 - 192 197247999 - SeAg_B1306 - hydrolase, nudix family 1220 55.31 0 1278103..1279467 - 454 197248790 pabB SeAg_B1307 - aminodeoxychorismate synthase, component I 1221 51.11 0 1279548..1279727 + 59 197249472 - SeAg_B1308 - hypothetical protein 1222 51.30 0 1279733..1280077 - 114 197248782 - SeAg_B1309 - endoribonuclease L-PSP family protein 1223 56.04 0 1280208..1282118 + 636 197249340 - SeAg_B1310 - hypothetical protein 1224 60.78 +1 1282176..1282871 + 231 197247413 - SeAg_B1311 - glycoprotease family protein 1225 55.67 0 1282943..1283524 + 193 197251262 slp SeAg_B1312 - outer membrane protein Slp 1226 37.20 -2 1283503..1283709 - 68 197247992 - SeAg_B1313 - hypothetical protein 1227 52.02 0 1283729..1285414 + 561 197251854 - SeAg_B1314 - long-chain-fatty-acid--CoA ligase 1228 55.67 0 1285487..1286614 + 375 197248423 rnd SeAg_B1316 - ribonuclease D 1229 43.82 -1 1286735..1287001 - 88 197247885 minE SeAg_B1317 - cell division topological specificity factor MinE 1230 51.66 0 1287005..1287817 - 270 197251567 minD SeAg_B1318 - septum site-determining protein MinD 1231 51.27 0 1287841..1288548 - 235 197251251 minC SeAg_B1319 - septum site-determining protein MinC 1232 43.55 -1 1288533..1288943 + 136 197250058 - SeAg_B1320 - protein YcgL 1233 52.88 0 1289017..1289676 + 219 197247927 - SeAg_B1321 - fumarylacetoacetate hydrolase family protein 1234 48.70 0 1289754..1290215 + 153 197248808 - SeAg_B1322 - protein YcgN 1235 50.00 0 1290567..1290704 + 45 197251844 - SeAg_B1323 - hypothetical protein 1236 45.98 0 1290897..1291070 + 57 197247935 - SeAg_B1324 - hypothetical protein 1237 51.46 0 1291141..1291482 - 113 197250553 - SeAg_B1325 - tellurite resistance protein TehB 1238 54.99 0 1291591..1292121 - 176 197251350 - SeAg_B1326 - oxido-reductase 1239 53.33 0 1292263..1293807 - 514 197251486 nhaB SeAg_B1327 - Na+/H+ antiporter NhaB 1240 52.22 0 1294027..1294746 + 239 197248451 fadR SeAg_B1328 - fatty acid metabolism transcriptional regulator FadR 1241 49.84 0 1294793..1296325 - 510 197250495 - SeAg_B1329 - SpoVR family protein 1242 56.51 0 1296648..1297946 + 432 197249818 - SeAg_B1330 - D-amino acid dehydrogenase small subunit 1243 57.14 0 1297960..1299030 + 356 197247858 alr SeAg_B1331 - alanine racemase 1244 54.73 0 1299093..1300826 - 577 197248214 - SeAg_B1332 - cell volume regulation protein A 1245 56.50 0 1300923..1301837 - 304 197250824 - SeAg_B1333 - muramoyltetrapeptide carboxypeptidase 1246 52.79 0 1302633..1303367 - 244 197249834 - SeAg_B1335 - YcgR family protein 1247 56.47 0 1303536..1303790 + 84 197250264 - SeAg_B1336 - transglycosylase associated protein 1248 55.52 0 1303853..1305565 - 570 197250839 - SeAg_B1337 - trehalase 1249 47.01 0 1305645..1305761 + 38 197251623 - SeAg_B1338 - hypothetical protein 1250 56.86 0 1305779..1307053 - 424 197249859 - SeAg_B1339 - glutamate dehydrogenase 1251 52.63 0 1307354..1307467 - 37 197248319 - SeAg_B1340 - hypothetical protein 1252 55.32 0 1307550..1308686 - 378 197250984 cydB SeAg_B1341 - cytochrome D ubiquinol oxidase, subunit II 1253 55.53 0 1308698..1310242 - 514 197251576 cydA SeAg_B1342 - cytochrome d ubiquinol oxidase, subunit I 1254 59.36 +1 1310317..1311165 - 282 197249796 - SeAg_B1343 - hydrogenase-1 operon protein HyaF 1255 58.02 0 1311162..1311566 - 134 197250153 - SeAg_B1344 - hydrogenase-1 operon protein HyaE 1256 57.79 0 1311556..1312152 - 198 197250366 hybD SeAg_B1345 - hydrogenase expression/formation protein 1257 55.19 0 1312149..1312880 - 243 197248917 cybH SeAg_B1346 - Ni/Fe-hydrogenase, B-type cytochrome subunit 1258 55.57 0 1312899..1314692 - 597 197248363 - SeAg_B1347 - hydrogenase-1 large chain 1259 56.37 0 1314689..1315834 - 381 197250876 - SeAg_B1348 - hydrogenase-1 small chain 1260 38.31 -2 1316302..1317567 + 421 197249170 - SeAg_B1349 - putative cytoplasmic protein 1261 29.96 -2 1318051..1318287 - 78 197249265 - SeAg_B1350 - hypothetical protein 1262 30.76 -2 1318545..1319165 - 206 197250013 - SeAg_B1351 - hypothetical protein 1263 41.03 -1 1319773..1319889 + 38 197250784 - SeAg_B1352 - hypothetical protein 1264 53.02 0 1319915..1321006 - 363 197251280 engD SeAg_B1353 - GTP-binding protein EngD 1265 51.62 0 1321123..1321707 - 194 197250918 pth SeAg_B1354 - peptidyl-tRNA hydrolase 1266 50.90 0 1321983..1322261 + 92 197249163 - SeAg_B1355 - hypothetical protein 1267 56.70 0 1322306..1323991 - 561 197247391 ychM SeAg_B1356 - sulfate permease 1268 54.54 0 1324116..1325063 - 315 197249386 prs SeAg_B1357 - ribose-phosphate pyrophosphokinase 1269 51.46 0 1325162..1325332 + 56 197250585 - SeAg_B1358 - hypothetical protein 1270 55.12 0 1325329..1326177 - 282 197247363 ispE SeAg_B1359 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1271 55.61 0 1326177..1326800 - 207 197248049 lolB SeAg_B1360 - outer membrane lipoprotein LolB 1272 45.74 0 1326818..1326946 + 42 197248719 - SeAg_B1361 - hypothetical protein 1273 56.88 0 1327114..1328370 + 418 197249373 hemA SeAg_B1362 - glutamyl-tRNA reductase 1274 57.62 0 1328411..1329493 + 360 197250213 prfA SeAg_B1363 - peptide chain release factor 1 51.63 MEAN 6.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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