version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 22 50.20 0 28426..29433 + 335 62178592 bcfD SC0022 - fimbrial subunit 23 49.27 0 29434..29979 + 181 62178593 bcfE SC0023 - fimbrial subunit 24 55.88 0 29995..30513 + 172 62178594 bcfF SC0024 - fimbrial subunit 25 54.23 0 30479..31210 + 243 62178595 bcfG SC0025 - fimbrial chaparone 26 54.96 0 31274..32119 + 281 62178596 bcfH SC0026 - hypothetical protein 27 41.67 -1 32158..32445 + 95 62178597 - SC0027 - hypothetical protein 28 40.22 -2 32545..32994 - 149 62178598 - SC0028 - hypothetical protein 29 46.36 0 33693..33953 + 86 62178599 asl SC0029 - putative arylsulfatase 30 43.97 -1 33978..34325 + 115 62178600 - SC0030 - hypothetical protein 31 39.08 -2 34909..35673 + 254 62178601 yfeN SC0031 - hypothetical protein 32 48.96 0 37290..38486 + 398 62178602 aslB SC0032 - putative arylsulfatase regulatory protein 33 50.16 0 38504..39757 + 417 62178603 - SC0033 - hypothetical protein 34 56.47 0 40445..41611 + 388 62178604 nhaA SC0034 - pH-dependent sodium/proton antiporter 35 50.78 0 41673..42572 + 299 62178605 nhaR SC0035 - transcriptional activator NhaR 36 54.36 0 42627..44666 - 679 62178606 - SC0036 - putative glycosyl hydrolase 37 46.59 0 46534..46797 - 87 62178607 rpsT SC0037 - 30S ribosomal protein S20 38 47.69 0 46903..47118 + 71 62178608 yaaY SC0038 - putative cytoplasmic protein 39 56.98 0 47126..48064 + 312 62178609 ribF SC0039 - bifunctional riboflavin kinase/FMN adenylyltransferase 40 54.79 0 48073..50943 + 956 62178610 ileS SC0040 - isoleucyl-tRNA synthetase 41 52.89 0 50943..51443 + 166 62178611 lspA SC0041 - lipoprotein signal peptidase 42 54.67 0 51598..52047 + 149 62178612 slpA SC0042 - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 43 57.62 0 52050..53000 + 316 62178613 ispH SC0043 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 44 48.38 0 53200..54402 + 400 62178614 - SC0044 - putative nitrite reductase 45 56.57 0 54418..55338 + 306 62178615 rihC SC0045 - ribonucleoside hydrolase RihC 46 48.33 0 55360..56046 - 228 62178616 citB SC0046 - putative transcription regulator sensor for citrate 47 47.62 0 56048..57706 - 552 62178617 citA SC0047 - putative transcription regulator, histidine kinase for citrate 48 64.21 +2 57802..59103 - 433 62178618 oadB SC0048 - putative oxalacetate decarboxylase, subunit beta 49 64.02 +2 59116..60891 - 591 62178619 oadA SC0049 - pyruvate carboxylase subunit B 50 56.79 0 60907..61149 - 80 62178620 oag3 SC0050 - oxaloacetate decarboxylase subunit gamma 51 49.22 0 61308..62648 - 446 62178621 citN SC0051 - putative citrate-sodium symport 52 53.35 0 62893..63936 + 347 62178622 citC2 SC0052 - putative citrate lyase synthetase (citrate (pro-3S)-lyase ligase 53 56.80 0 63966..64259 + 97 62178623 citD2 SC0053 - citrate lyase subunit gamma 54 55.52 0 64256..65125 + 289 62178624 citE2 SC0054 - putative citrate lyase beta chain (acyl lyase subunit) 55 55.36 0 65136..66656 + 506 62178625 citF2 SC0055 - putative citrate lyase alpha chain/citrate-ACP transferase 56 55.49 0 66707..67207 + 166 62178626 citX2 SC0056 - putative cytoplasmic protein 57 54.57 0 67185..68093 + 302 62178627 citG2 SC0057 - putative modifier of citrate lyase protein 58 56.57 0 68273..69094 + 273 62178628 dapB SC0058 - dihydrodipicolinate reductase 59 35.90 -2 69746..69901 - 51 62178629 - SC0059 - hypothetical protein 60 56.40 0 69959..71107 + 382 62178630 carA SC0060 - carbamoyl phosphate synthase small subunit 61 58.95 +1 71126..74353 + 1075 62178631 carB SC0061 - carbamoyl phosphate synthase large subunit 62 46.46 0 74627..75022 + 131 62178632 caiF SC0062 - DNA-binding transcriptional activator CaiF 63 55.78 0 75100..75696 - 198 62178633 caiE SC0063 - carnitine operon protein CaiE 64 56.11 0 75806..76591 - 261 62178634 caiD SC0064 - carnitinyl-CoA dehydratase 65 51.09 0 76645..78198 - 517 62178635 caiC SC0065 - putative crotonobetaine/carnitine-CoA ligase 66 53.28 0 78261..79478 - 405 62178636 caiB SC0066 - crotonobetainyl-CoA:carnitine CoA-transferase 67 52.58 0 79590..80732 - 380 62178637 caiA SC0067 - crotonobetainyl-CoA dehydrogenase 68 53.75 0 80767..82284 - 505 62178638 caiT SC0068 - L-carnitine/gamma-butyrobetaine antiporter 69 28.49 -2 82512..82697 + 61 62178639 - SC0069 - hypothetical protein 70 52.27 0 82765..83535 + 256 62178640 fixA SC0070 - putative electron transfer flavoprotein FixA 71 59.24 +1 83551..84492 + 313 62178641 fixB SC0071 - putative electron transfer flavoprotein FixB 72 55.48 0 84542..85828 + 428 62178642 fixC SC0072 - putative oxidoreductase FixC 73 55.21 0 85825..86112 + 95 62178643 fixX SC0073 - putative ferredoxin, carnitine metabolism 74 53.99 0 86259..87599 + 446 62178644 yaaU SC0074 - MFS family transporter 75 48.48 0 87688..87918 + 76 62178645 ygdI SC0075 - putative outer membrane lipoprotein 76 46.76 0 88203..88619 + 138 62178646 - SC0076 - putative secreted protein 77 46.39 0 88842..89132 - 96 62178647 - SC0077 - putative secreted protein 78 38.46 -2 89342..89536 + 64 62178648 cysB SC0078 - putative inner membrane protein 79 46.72 0 90030..91919 + 629 62178649 - SC0079 - putative sulfatase 80 52.73 0 92473..93003 + 176 62178650 yabF SC0080 - glutathione-regulated potassium-efflux system ancillary protein KefF 81 57.97 +1 92996..94858 + 620 62178651 kefC SC0081 - glutathione-regulated potassium-efflux system protein KefC 82 53.75 0 95057..95536 + 159 62178652 folA SC0082 - dihydrofolate reductase 83 55.59 0 95642..96490 - 282 62178653 apaH SC0083 - diadenosine tetraphosphatase 84 54.50 0 96501..96878 - 125 62178654 apaG SC0084 - ApaG 85 52.43 0 96881..97702 - 273 62178655 ksgA SC0085 - dimethyladenosine transferase 86 58.48 +1 97699..98688 - 329 62178656 pdxA SC0086 - 4-hydroxythreonine-4-phosphate dehydrogenase 87 54.39 0 98688..99974 - 428 62178657 surA SC0087 - peptidyl-prolyl cis-trans isomerase SurA 88 52.69 0 100028..102388 - 786 62178658 imp SC0088 - organic solvent tolerance protein 89 53.75 0 102642..103454 + 270 62178659 djlA SC0089 - DNA-J like membrane chaperone protein 90 57.42 0 103549..104208 - 219 62178660 rluA SC0090 - 23S rRNA/tRNA pseudouridine synthase A 91 57.07 0 104220..107126 - 968 62178661 hepA SC0091 - ATP-dependent helicase HepA 92 56.80 0 107300..109651 - 783 62178662 polB SC0092 - DNA polymerase II 93 49.44 0 109695..110315 - 206 62178663 - SC0093 - putative secreted protein 94 42.86 -1 110833..111252 + 139 62178664 - SC0094 - hypothetical protein 95 55.32 0 111258..111953 - 231 62178665 araD SC0095 - L-ribulose-5-phosphate 4-epimerase 96 55.69 0 112094..113596 - 500 62178666 araA SC0096 - L-arabinose isomerase 97 57.33 0 113546..113845 + 99 62178667 - SC0097 - hypothetical protein 98 53.78 0 115653..116498 + 281 62178668 araC SC0098 - DNA-binding transcriptional regulator AraC 99 57.16 0 116617..117384 + 255 62178669 yabI SC0099 - DedA family, membrane protein 100 57.49 0 117423..118130 - 235 62178670 thiQ SC0100 - thiamine transporter ATP-binding subunit 101 59.71 +1 118114..119724 - 536 62178671 thiP SC0101 - thiamine transporter membrane protein 102 55.08 0 119700..120683 - 327 62178672 tbpA SC0102 - thiamine transporter substrate binding subunit 103 56.84 0 120861..122519 - 552 62178673 yabN SC0103 - transcriptional regulator SgrR 104 55.10 0 122588..122734 + 48 62178674 leuD SC0104 - hypothetical protein 105 43.97 -1 123054..123335 + 93 62178675 - SC0105 - hypothetical protein 106 53.96 0 123389..123994 - 201 62178676 leuD SC0106 - isopropylmalate isomerase small subunit 107 58.82 +1 124005..125405 - 466 62178677 leuC SC0107 - isopropylmalate isomerase large subunit 108 55.77 0 125408..126499 - 363 62178678 leuB SC0108 - 3-isopropylmalate dehydrogenase 109 54.96 0 126499..128070 - 523 62178679 leuA SC0109 - 2-isopropylmalate synthase 110 47.13 0 128158..128244 - 28 62178680 leuL SC0110 - leu operon leader peptide 111 19.19 -2 128499..128597 + 32 62178681 - SC0111 - hypothetical protein 112 36.81 -2 128687..128830 + 47 62178682 - SC0112 - hypothetical protein 113 54.61 0 130167..131891 + 574 162139624 ilvI SC0113 - acetolactate synthase 3 catalytic subunit 114 53.33 0 131891..132385 + 164 62178684 ilvH SC0114 - acetolactate synthase 3 regulatory subunit 115 56.52 0 132669..133673 + 334 62178685 fruR SC0115 - DNA-binding transcriptional regulator FruR 116 51.85 0 134279..134737 + 152 62178686 yabB SC0116 - cell division protein MraZ 117 56.34 0 134742..135680 + 312 62178687 mraW SC0117 - S-adenosyl-methyltransferase MraW 118 51.91 0 135677..136042 + 121 62178688 ftsL SC0118 - cell division protein FtsL 119 54.84 0 136058..137824 + 588 62178689 ftsI SC0119 - division specific transpeptidase, penicillin-binding protein 3 re 120 58.67 +1 137811..139298 + 495 62178690 murE SC0120 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 121 56.44 0 139295..140653 + 452 62178691 murF SC0121 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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