version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 642 54.10 0 723456..724919 - 487 62179217 citT SC0647 - DASS family citrate:succinate transporter 643 60.31 +1 724957..725853 - 298 62179218 citG SC0648 - triphosphoribosyl-dephospho-CoA synthase 644 61.41 +1 725825..726376 - 183 62179219 citX SC0649 - 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase 645 58.69 +1 726380..727909 - 509 62179220 citF SC0650 - citrate lyase alpha chain/citrate-ACP transferase 646 59.41 +1 727919..728827 - 302 62179221 citE SC0651 - citrate lyase beta chain (acyl lyase subunit) 647 56.57 0 728824..729120 - 98 62179222 citD SC0652 - citrate lyase subunit gamma 648 51.72 0 729117..730193 - 358 62179223 citC SC0653 - citrate lyase synthetase (citrate (pro-3S)-lyase ligase 649 29.51 -2 730386..730568 + 60 62179224 - SC0654 - hypothetical protein 650 51.87 0 730578..732239 + 553 62179225 dpiB SC0655 - sensory histidine kinase in two-component regulatory system with DpiA, regulation of cit operon and plasmid inheritance genes 651 53.73 0 732340..732888 + 182 62179226 dpiA SC0656 - two-component response regulator DpiA 652 53.82 0 732942..734327 - 461 62179227 dcuC SC0657 - C4-dicarboxylate transporter DcuC 653 44.29 -1 735462..735671 + 69 162139604 cspE SC0658 - cold shock protein CspE 654 52.34 0 735729..736112 - 127 62179229 ccrB SC0659 - camphor resistance protein CrcB 655 56.02 0 736203..736991 + 262 62179230 ybeM SC0660 - putative hydrolase 656 49.51 0 737120..737323 + 67 62179231 tatE SC0661 - twin arginine translocase protein E 657 54.87 0 737409..738374 - 321 62179232 lipA SC0662 - lipoyl synthase 658 50.21 0 738580..739533 - 317 62179233 ybeF SC0663 - putative DNA-binding transcriptional regulator 659 49.65 0 739835..740410 - 191 62179234 lipB SC0664 - lipoyltransferase 660 45.79 -1 740576..740872 - 98 62179235 ybeD SC0665 - hypothetical protein 661 52.06 0 740948..742159 - 403 62179236 dacA SC0666 - D-alanyl-D-alanine carboxypeptidase fraction A 662 42.00 -1 742179..742328 + 49 62179237 - SC0667 - hypothetical protein 663 60.99 +1 742299..743444 - 381 62179238 rlpA SC0668 - rare lipoprotein A 664 52.83 0 743455..744567 - 370 62179239 mrdB SC0669 - cell wall shape-determining protein 665 54.26 0 744570..746471 - 633 62179240 mrdA SC0670 - penicillin-binding protein 2 666 57.26 0 746502..746969 - 155 62179241 ybeA SC0671 - SPOUT methyltransferase superfamily protein 667 50.63 0 746973..747290 - 105 62179242 ybeB SC0672 - hypothetical protein 668 57.64 0 747619..748227 - 202 62179243 cobC SC0673 - alpha ribazole-5'-P phosphatase in cobalamin synthesis 669 56.44 0 748324..749418 + 364 62179244 cobD SC0674 - threonine-phosphate decarboxylase 670 54.52 0 749393..750034 - 213 62179245 nadD SC0675 - nicotinic acid mononucleotide adenylyltransferase 671 57.56 0 750036..751067 - 343 62179246 holA SC0676 - DNA polymerase III subunit delta 672 55.50 0 751067..751657 - 196 62179247 rlpB SC0677 - LPS-assembly lipoprotein RplB 673 55.38 0 751672..754347 - 891 62179248 leuS SC0678 - leucyl-tRNA synthetase 674 50.17 0 754542..754832 + 96 62179249 uxaA SC0679 - putative hydrolase N-terminus 675 52.52 0 756068..757021 + 317 62179250 kdg SC0680 - 2-keto-3-deoxygluconate permease 676 49.92 0 757089..759017 + 642 62179251 yqiR SC0681 - putative sigma-54 dependent transcriptional regulator 677 55.70 0 759110..759583 + 157 62179252 ybeL SC0682 - hypothetical protein 678 47.69 0 759622..760617 - 331 62179253 ybeQ SC0683 - TPR repeat-containing protein 679 52.97 0 760742..761449 + 235 62179254 ybeR SC0684 - putative cytoplasmic protein 680 55.09 0 761446..762879 + 477 62179255 ybeS SC0685 - DnaJ family molecular chaperone 681 50.72 0 762891..763586 + 231 62179256 ybeU SC0686 - putative cytoplasmic protein 682 52.86 0 765068..766747 - 559 62179257 - SC0687 - HSP70 family molecular chaperone 683 54.00 0 766823..768061 - 412 62179258 - SC0688 - putative cytoplasmic protein 684 57.91 +1 768093..769028 - 311 62179259 rihA SC0689 - ribonucleoside hydrolase 1 685 52.48 0 769145..769870 - 241 62179260 gltL SC0690 - glutamate/aspartate ABC transporter ATP-binding protein 686 53.93 0 769870..770544 - 224 62179261 gltK SC0691 - glutamate/aspartate ABC transporter 687 54.12 0 770544..771284 - 246 62179262 gltJ SC0692 - glutamate/aspartate ABC transporter 688 51.46 0 771443..772369 - 308 62179263 gltI SC0693 - glutamate and aspartate transporter subunit 689 54.53 0 772706..774295 - 529 62179264 lnt SC0694 - apolipoprotein N-acyltransferase 690 51.99 0 774264..775142 - 292 62179265 ybeX SC0695 - CBS domain-containing protein 691 53.80 0 775300..775773 - 157 62179266 ybeY SC0696 - putative metalloprotease 692 53.59 0 775770..776855 - 361 62179267 phoL SC0697 - putative phosphate starvation-inducible protein, ATP-binding 693 53.92 0 777021..778487 - 488 62179268 miaB SC0698 - methylthiolation of isopentenylated A37 derivatives in rRNA 694 60.12 +1 778589..779764 + 391 62179269 ubiF SC0699 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 695 54.53 0 780825..782489 - 554 62179271 asnB SC0701 - asparagine synthetase B 696 55.11 0 782779..783531 - 250 62179272 nagD SC0702 - UMP phosphatase 697 53.40 0 783578..784798 - 406 62179273 nagC SC0703 - N-acetylglucosamine operon transcriptional repressor 698 52.21 0 784803..785957 - 384 62179274 nagA SC0704 - N-acetylglucosamine-6-phosphate deacetylase 699 50.69 0 786017..786817 - 266 62179275 nagB SC0705 - glucosamine-6-phosphate deaminase 700 56.02 0 787144..789096 + 650 62179276 nagE SC0706 - N-acetyl glucosamine specific PTS system components IIABC 701 53.66 0 789307..790974 + 555 62179277 glnS SC0707 - glutaminyl-tRNA synthetase 702 51.46 0 791426..792832 + 468 62179278 ybfM SC0708 - putative outer membrane protein 703 52.55 0 792882..793214 + 110 62179279 ybfN SC0709 - putative lipoprotein 704 54.10 0 793263..794567 - 434 62179280 citA SC0710 - citrate-proton symporter 705 58.12 +1 795744..797147 - 467 62179281 frdA SC0711 - tricarballylate dehydrogenase 706 56.09 0 797245..798171 - 308 62179282 nacR SC0712 - LysR family transcriptional regulator 707 47.68 0 798286..798738 - 150 62179283 fur SC0713 - ferric uptake regulator 708 51.04 0 799020..799550 - 176 62179284 fldA SC0714 - flavodoxin FldA 709 52.38 0 799701..799994 - 97 62179285 ybfE SC0715 - LexA regulated protein 710 55.90 0 800128..800898 - 256 62179286 ybfF SC0716 - hypothetical protein 711 51.20 0 801083..801625 + 180 162139603 seqA SC0717 - replication initiation regulator SeqA 712 56.12 0 801650..803290 + 546 62179288 pgm SC0718 - phosphoglucomutase 713 49.59 0 803405..803890 - 161 62179289 - SC0719 - putative cytoplasmic protein 714 54.02 0 803955..805274 - 439 62179290 potE SC0720 - putrescine transporter 715 53.75 0 805271..807469 - 732 62179291 speF SC0721 - ornithine decarboxylase 716 56.78 0 808231..808908 - 225 62179292 kdpE SC0722 - DNA-binding transcriptional activator KdpE 717 58.73 +1 808905..811589 - 894 62179293 kdpD SC0723 - sensor protein KdpD 718 59.66 +1 811586..812170 - 194 62179294 kdpC SC0724 - potassium-transporting ATPase subunit C 719 58.86 +1 812179..814227 - 682 62179295 kdpB SC0725 - potassium-transporting ATPase subunit B 720 57.32 0 814248..815927 - 559 62179296 kdpA SC0726 - potassium-transporting ATPase subunit A 721 48.89 0 815927..816016 - 29 62179297 - SC0727 - putative outer membrane protein 722 57.05 0 816668..818008 + 446 62179298 phrB SC0728 - deoxyribodipyrimidine photolyase 723 53.32 0 818129..819844 - 571 62179299 ybgH SC0729 - POT family transport protein 724 55.38 0 819939..820682 + 247 62179300 ybgI SC0730 - putative hydrolase-oxidase 725 60.73 +1 820698..821354 + 218 62179301 ybgJ SC0731 - hypothetical protein 726 58.41 +1 821348..822280 + 310 62179302 ybgK SC0732 - hypothetical protein 727 59.10 +1 822225..823004 + 259 62179303 ybgL SC0733 - hypothetical protein 728 52.90 0 823126..823917 + 263 62179304 nei SC0734 - endonuclease VIII 729 56.45 0 823972..825018 - 348 62179305 abrB SC0735 - hypothetical protein 730 52.73 0 825155..826438 - 427 62179306 gltA SC0736 - type II citrate synthase 731 48.21 0 827192..827581 + 129 62179307 sdhC SC0737 - succinate dehydrogenase cytochrome b556 large membrane subunit 732 58.57 +1 827922..829688 + 588 62179308 sdhA SC0738 - succinate dehydrogenase flavoprotein subunit 733 50.97 0 829702..830421 + 239 62179309 sdhB SC0739 - succinate dehydrogenase iron-sulfur subunit 734 55.89 0 830947..833748 + 933 62179310 kgd SC0740 - alpha-ketoglutarate decarboxylase 735 56.33 0 833763..834971 + 402 62179311 sucB SC0741 - dihydrolipoamide acetyltransferase 736 56.38 0 835113..836279 + 388 62179312 sucC SC0742 - succinyl-CoA synthetase subunit beta 737 56.55 0 836279..837148 + 289 62179313 sucD SC0743 - succinyl-CoA synthetase subunit alpha 738 53.41 0 838731..840299 + 522 62179314 cydA SC0744 - cytochrome d terminal oxidase, polypeptide subunit I 739 55.09 0 840315..841454 + 379 62179315 cydB SC0745 - cytochrome d terminal oxidase polypeptide subunit II 740 50.88 0 841469..841582 + 37 62179316 ybgT SC0746 - hypothetical protein 741 53.06 0 841582..841875 + 97 62179317 ybgE SC0747 - hypothetical protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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