version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 542 53.40 0 610211..610858 - 215 62179117 tesA SC0547 - multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 543 59.10 +1 610796..611482 + 228 62179118 ybbA SC0548 - putative ABC transporter ATP-binding protein YbbA 544 58.05 +1 611479..613893 + 804 62179119 ybbP SC0549 - hypothetical protein 545 50.09 0 614079..615212 + 377 62179120 - SC0550 - putative outer membrane protein 546 52.71 0 615469..616299 + 276 62179121 sfbA SC0551 - putative ABC-type transport system ATPase component/cell division protein 547 55.75 0 616336..617352 + 338 62179122 sfbB SC0552 - putative ABC-type transport system ATPase component/cell division protein 548 54.39 0 617345..618004 + 219 62179123 sfbC SC0553 - putative binding-protein-dependent transport systems inner membrane component 549 56.35 0 618043..619137 - 364 62179124 ybbB SC0554 - tRNA 2-selenouridine synthase 550 52.13 0 619171..620133 - 320 62179125 ybbS SC0555 - DNA-binding transcriptional activator AllS 551 50.31 0 620360..620842 + 160 62179126 allA SC0556 - ureidoglycolate hydrolase 552 55.07 0 620921..621739 + 272 62179127 allR SC0557 - DNA-binding transcriptional repressor AllR 553 45.56 -1 623626..624402 + 258 62179128 gip SC0558 - hydroxypyruvate isomerase 554 51.08 0 624503..625381 + 292 62179129 glxR SC0559 - tartronic semialdehyde reductase 555 45.99 -1 625447..626694 + 415 62179130 yhjE SC0560 - putative permease 556 45.57 -1 626790..628244 + 484 62179131 allP SC0561 - allantoin permease 557 51.54 0 628323..629684 + 453 62179132 allB SC0562 - allantoinase 558 51.50 0 629743..631041 + 432 62179133 ybbY SC0563 - putative purine permease YbbY 559 57.18 0 631064..632212 + 382 62179134 glxK SC0564 - glycerate kinase II 560 49.24 0 632292..633077 - 261 62179135 ylbA SC0565 - hypothetical protein 561 53.80 0 633088..634323 - 411 62179136 allC SC0566 - allantoate amidohydrolase 562 50.19 0 634345..635394 - 349 62179137 allD SC0567 - ureidoglycolate dehydrogenase 563 57.18 0 635710..637374 + 554 62179138 fdrA SC0568 - membrane protein FdrA 564 56.67 0 637384..638643 + 419 62179139 ylbE SC0569 - putative cytoplasmic protein 565 57.16 0 638655..639464 + 269 62179140 ylbF SC0570 - putative cytoplasmic protein 566 57.94 +1 639468..640361 + 297 62179141 arcC SC0571 - carbamate kinase 567 59.27 +1 640402..641469 - 355 62179142 purK SC0572 - phosphoribosylaminoimidazole carboxylase ATPase subunit 568 60.20 +1 641466..641975 - 169 62179143 purE SC0573 - phosphoribosylaminoimidazole carboxylase catalytic subunit 569 55.46 0 642093..642815 - 240 62179144 lpxH SC0574 - UDP-2,3-diacylglucosamine hydrolase 570 49.09 0 642818..643312 - 164 62179145 ppiB SC0575 - peptidyl-prolyl cis-trans isomerase B (rotamase B) 571 54.91 0 643485..644870 + 461 62179146 cysS SC0576 - cysteinyl-tRNA synthetase 572 51.64 0 644914..645738 - 274 62179147 - SC0577 - putative outer membrane protein 573 48.86 0 645735..646172 - 145 62179148 - SC0578 - putative inner membrane protein 574 53.48 0 646165..646710 - 181 62179149 ybcI SC0579 - putative membrane-bound metal-dependent hydrolase 575 56.81 0 646837..647049 - 70 162139606 ybcJ SC0580 - hypothetical protein 576 54.90 0 647051..647917 - 288 62179151 folD SC0581 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 577 53.37 0 648395..649018 + 207 62179152 fimA SC0582 - major type 1 subunit fimbrin (pilin) 578 54.31 0 649094..649627 + 177 62179153 fimI SC0583 - fimbrial protein internal segment 579 44.83 -1 649958..651166 - 402 62179154 TnpR SC0584 - transposase of Tn10 580 55.63 0 651732..654350 + 872 62179155 fimD SC0585 - outer membrane usher protein 581 51.69 0 654365..655372 + 335 62179156 fimH SC0586 - minor fimbrial subunit 582 55.30 0 655382..655900 + 172 62179157 fimF SC0587 - putative fimbrial protein 583 40.91 -1 655946..656671 - 241 62179158 fimZ SC0588 - transcriptional regulator FimZ 584 46.75 0 657182..657904 - 240 62179159 fimY SC0589 - putative regulatory protein 585 41.21 -1 658397..658993 - 198 62179160 fimW SC0590 - putative fimbrial protein 586 41.10 -1 658967..659185 + 72 62179161 - SC0591 - hypothetical protein 587 47.11 0 660997..661359 + 120 62179162 rfbI SC0592 - putative glycosyl translocase 588 45.74 -1 661356..662282 + 308 62179163 yfdH SC0593 - putative glycosyltransferase 589 32.26 -2 662279..663865 + 528 62179164 - SC0594 - hypothetical protein 590 38.21 -2 665193..666647 - 484 62179165 - SC0595 - hypothetical protein 591 45.85 -1 666637..667563 - 308 62179166 yfdH SC0596 - putative glycosyltransferase 592 47.11 0 667560..667922 - 120 62179167 rfbI SC0597 - putative glycosyl translocase 593 48.89 0 668351..668575 + 74 62179168 - SC0598 - hypothetical protein 594 48.79 0 668790..669119 - 109 62179169 cusS SC0599 - sensor protein 595 58.95 +1 669410..670264 - 284 62179170 ykgD SC0600 - AraC/XylS family transcription factor 596 52.79 0 670480..671805 + 441 62179171 ykgC SC0601 - pyridine nucleotide-disulfide oxidoreductase 597 46.84 0 671962..672198 + 78 62179172 ykgI SC0602 - putative periplasmic protein 598 50.80 0 672211..672771 + 186 62179173 ykgB SC0603 - hypothetical protein 599 53.91 0 672850..674025 - 391 62179174 - SC0604 - hypothetical protein 600 53.12 0 674351..675745 + 464 62179175 pheP SC0605 - phenylalanine transporter 601 49.36 0 675787..677034 - 415 62179176 ybdG SC0606 - hypothetical protein 602 47.54 0 677064..677246 + 60 62179177 - SC0607 - hypothetical protein 603 55.66 0 677345..679315 + 656 62179178 apeE SC0608 - outer membrane N-acetyl phenylalanine beta-naphthyl ester-cleaving esterase 604 54.43 0 679581..680234 - 217 62179179 nfnB SC0609 - dihydropteridine reductase 605 50.41 0 680331..680699 - 122 62179180 ybdF SC0610 - hypothetical protein 606 53.26 0 680699..681280 - 193 62179181 - SC0611 - putative regulatory protein 607 50.29 0 681569..681910 + 113 62179182 ramA SC0612 - putative regulatory protein 608 51.00 0 681916..682164 - 82 62179183 ybdJ SC0613 - hypothetical protein 609 53.98 0 682231..683349 - 372 62179184 ybdK SC0614 - carboxylate-amine ligase 610 55.60 0 683361..684065 - 234 62179185 entD SC0615 - phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex 611 54.03 0 684111..686366 - 751 62179186 fepA SC0616 - outer membrane receptor FepA 612 59.40 +1 686546..687769 + 407 62179187 fes SC0617 - enterobactin/ferric enterobactin esterase 613 54.79 0 687800..688018 + 72 62179188 ybdZ SC0618 - hypothetical protein 614 58.89 +1 688015..691899 + 1294 62179189 entF SC0619 - enterobactin synthase subunit F 615 48.97 0 692122..693285 + 387 62179190 fepE SC0620 - ferric enterobactin transport protein FepE 616 56.60 0 693339..694133 - 264 62179191 fepC SC0621 - iron-enterobactin transporter ATP-binding protein 617 59.92 +1 694130..695122 - 330 62179192 fepG SC0622 - iron-enterobactin transporter permease 618 61.31 +1 695119..696126 - 335 62179193 fepD SC0623 - iron-enterobactin transporter membrane protein 619 58.80 +1 696237..697481 + 414 62179194 ybdA SC0624 - enterobactin exporter EntS 620 58.10 +1 697544..698500 - 318 62179195 fepB SC0625 - iron-enterobactin transporter periplasmic binding protein 621 58.25 +1 698809..699984 + 391 162139605 entC SC0626 - isochorismate synthase 622 57.29 0 699994..701604 + 536 62179197 entE SC0627 - enterobactin synthase subunit E 623 56.76 0 701618..702475 + 285 62179198 entB SC0628 - 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatase 624 58.33 +1 702475..703230 + 251 62179199 entA SC0629 - 2,3-dihydroxybenzoate-2,3-dehydrogenase 625 60.39 +1 703233..703646 + 137 62179200 ybdB SC0630 - hypothetical protein 626 57.10 0 703828..705927 + 699 62179201 cstA SC0631 - carbon starvation protein 627 52.53 0 705991..706188 + 65 62179202 ybdD SC0632 - hypothetical protein 628 57.67 0 706224..707312 - 362 62179203 ybdH SC0633 - hypothetical protein 629 54.14 0 707403..708599 + 398 62179204 ybdL SC0634 - putative aminotransferase 630 51.46 0 708600..709217 - 205 62179205 ybdM SC0635 - hypothetical protein 631 49.03 0 709190..710425 - 411 62179206 ybdN SC0636 - putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase 632 39.09 -2 710591..711493 - 300 62179207 ybdO SC0637 - LysR family transcriptional regulator 633 50.60 0 711810..712556 - 248 62179208 dsbG SC0638 - disulfide isomerase/thiol-disulfide oxidase 634 50.71 0 712997..713560 + 187 62179209 ahpC SC0639 - alkyl hydroperoxide reductase subunit C 635 55.30 0 713802..715367 + 521 62179210 ahpF SC0640 - alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides 636 43.67 -1 715700..716260 + 186 62179211 - SC0641 - hypothetical protein 637 55.00 0 716253..718532 + 759 62179212 yyaE SC0642 - putative oxidoreductase protein 638 53.76 0 718529..719086 + 185 62179213 dmsB SC0643 - putative hydrogenase protein 639 55.34 0 719086..719853 + 255 62179214 ynfH SC0644 - putative hydrogenase protein 640 51.52 0 719921..720349 - 142 62179215 ybdQ SC0645 - putative universal stress protein UspA and related nucleotide-binding protein 641 57.91 +1 721894..722304 - 136 62179216 rnk SC0646 - nucleoside diphosphate kinase regulator 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0