version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 479 54.02 0 539545..541536 - 663 62179054 cyoB SC0484 - cytochrome o ubiquinol oxidase subunit I 480 50.68 0 541547..542503 - 318 62179055 cyoA SC0485 - cytochrome o ubiquinol oxidase subunit II 481 56.88 0 542956..544437 - 493 62179056 ampG SC0486 - muropeptide transporter 482 51.81 0 544475..545053 - 192 162139609 yajG SC0487 - hypothetical protein 483 49.51 0 545367..545675 + 102 62179058 bolA SC0488 - transcriptional regulator BolA 484 52.04 0 546022..547320 + 432 62179059 tig SC0489 - trigger factor 485 50.96 0 547568..548191 + 207 162139608 clpP SC0490 - ATP-dependent Clp protease proteolytic subunit 486 52.67 0 548443..549714 + 423 62179061 clpX SC0491 - ATP-dependent protease ATP-binding subunit 487 53.76 0 549900..552254 + 784 62179062 lon SC0492 - DNA-binding ATP-dependent protease La 488 49.45 0 552463..552735 + 90 62179063 hupB SC0493 - transcriptional regulator HU subunit beta 489 52.40 0 553026..554897 + 623 62179064 cypD SC0494 - peptidyl-prolyl cis-trans isomerase (rotamase D) 490 52.53 0 555047..555421 + 124 62179065 ybaV SC0495 - hypothetical protein 491 47.37 0 555525..555923 + 132 62179066 ybaW SC0496 - hypothetical protein 492 52.93 0 556029..556829 - 266 62179067 ybaX SC0497 - queuosine biosynthesis protein QueC 493 56.35 0 556789..558504 - 571 62179068 ybaE SC0498 - putative ABC transporter periplasmic binding protein 494 54.58 0 558590..559408 + 272 62179069 cof SC0499 - hypothetical protein 495 54.55 0 559458..560513 - 351 62179070 - SC0500 - putative cysteine synthase/cystathionine beta-synthase 496 51.63 0 560625..561083 + 152 62179071 ybaO SC0501 - putative transcriptional regulator (AsnC familiy) 497 55.27 0 561124..562896 + 590 62179072 mdlA SC0502 - putative multidrug transporter membrane\ATP-binding components 498 57.74 +1 562889..564670 + 593 62179073 mdlB SC0503 - putative multidrug transporter membrane\ATP-binding components 499 54.09 0 564674..564832 + 52 62179074 - SC0504 - hypothetical protein 500 52.80 0 564883..565221 + 112 62179075 glnK SC0505 - nitrogen regulatory protein P-II 2 501 55.86 0 565253..566548 + 431 62179076 amtB SC0506 - ammonium transporter 502 53.31 0 566648..567508 - 286 62179077 tesB SC0507 - acyl-CoA thioesterase II 503 54.21 0 567723..568292 + 189 62179078 ybaY SC0508 - glycoprotein/polysaccharide metabolism 504 55.90 0 568325..568714 - 129 62179079 ybaZ SC0509 - putative methyltransferase 505 52.22 0 568945..570495 - 516 62179080 ylaB SC0510 - diguanylate cyclase/phosphodiesterase domain-containing protein 506 43.68 -1 570720..570980 + 86 62179081 rpmE2 SC0511 - 50S ribosomal protein L31 type B 507 43.26 -1 570986..571126 + 46 62179082 rpmJ SC0512 - 50S ribosomal protein L36 508 49.04 0 571182..571652 - 156 62179083 ylaC SC0513 - hypothetical protein 509 49.46 0 571770..572321 - 183 62179084 maa SC0514 - maltose O-acetyltransferase 510 40.18 -2 572500..572718 - 72 62179085 hha SC0515 - hemolysin expression-modulating protein 511 42.13 -1 572746..573120 - 124 62179086 ybaJ SC0516 - hypothetical protein 512 54.44 0 573616..576765 - 1049 62179087 acrB SC0517 - acridine efflux system protein 513 55.16 0 576788..577873 - 361 62179088 acrA SC0518 - acridine efflux pump 514 52.57 0 578895..582257 + 1120 162139607 aefA SC0519 - potassium efflux protein KefA 515 52.81 0 582299..583222 - 307 62179090 - SC0520 - putative transposase 516 44.05 -1 583292..583459 - 55 62179091 ybaM SC0521 - hypothetical protein 517 58.90 +1 583473..584000 - 175 62179092 priC SC0522 - primosomal replication protein N'' 518 52.53 0 584051..584446 + 131 62179093 ybaN SC0523 - hypothetical protein 519 53.99 0 584599..585150 + 183 62179094 apt SC0524 - adenine phosphoribosyltransferase 520 59.05 +1 585264..587192 + 642 62179095 dnaX SC0525 - DNA polymerase III subunits gamma and tau 521 54.85 0 587238..587567 + 109 62179096 ybaB SC0526 - hypothetical protein 522 61.39 +1 587567..588172 + 201 62179097 recR SC0527 - recombination protein RecR 523 52.55 0 588259..590157 + 632 62179098 htpG SC0528 - heat shock protein 90 524 54.73 0 590399..591043 + 214 62179099 adk SC0529 - adenylate kinase 525 48.31 0 591056..591262 + 68 62179100 - SC0530 - hypothetical protein 526 56.80 0 591272..592234 + 320 62179101 hemH SC0531 - ferrochelatase 527 56.07 0 592231..593202 - 323 62179102 aes SC0532 - acetyl esterase 528 53.19 0 593310..594659 + 449 62179103 gsk SC0533 - inosine-guanosine kinase 529 57.01 0 594708..596384 - 558 62179104 ybaL SC0534 - putative cation:proton antiport protein 530 55.36 0 596599..597819 - 406 62179105 fsr SC0535 - MFS family transporter 531 51.85 0 597992..599644 + 550 62179106 ushA SC0536 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 532 53.12 0 599761..600240 - 159 62179107 ybaK SC0537 - hypothetical protein 533 56.60 0 600442..601236 - 264 62179108 ybaP SC0538 - hypothetical protein 534 59.27 +1 602302..604803 - 833 62179109 copA SC0539 - copper exporting ATPase 535 52.76 0 604913..605329 + 138 62179110 cueR SC0540 - DNA-binding transcriptional regulator CueR 536 60.04 +1 605330..605782 - 150 62179111 ybbJ SC0541 - hypothetical protein 537 54.79 0 605779..606696 - 305 62179112 ybbK SC0542 - hypothetical protein 538 47.35 0 606843..607520 + 225 62179113 ybbL SC0543 - putative ABC transporter ATP-binding protein YbbL 539 51.03 0 607507..608286 + 259 62179114 ybbM SC0544 - YbbM family transport protein metal resistance protein 540 54.97 0 608372..609226 - 284 62179115 ybbN SC0545 - paral putative thioredoxin protein 541 54.60 0 609286..610056 - 256 62179116 ybbO SC0546 - short chain dehydrogenase 542 53.40 0 610211..610858 - 215 62179117 tesA SC0547 - multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 543 59.10 +1 610796..611482 + 228 62179118 ybbA SC0548 - putative ABC transporter ATP-binding protein YbbA 544 58.05 +1 611479..613893 + 804 62179119 ybbP SC0549 - hypothetical protein 545 50.09 0 614079..615212 + 377 62179120 - SC0550 - putative outer membrane protein 546 52.71 0 615469..616299 + 276 62179121 sfbA SC0551 - putative ABC-type transport system ATPase component/cell division protein 547 55.75 0 616336..617352 + 338 62179122 sfbB SC0552 - putative ABC-type transport system ATPase component/cell division protein 548 54.39 0 617345..618004 + 219 62179123 sfbC SC0553 - putative binding-protein-dependent transport systems inner membrane component 549 56.35 0 618043..619137 - 364 62179124 ybbB SC0554 - tRNA 2-selenouridine synthase 550 52.13 0 619171..620133 - 320 62179125 ybbS SC0555 - DNA-binding transcriptional activator AllS 551 50.31 0 620360..620842 + 160 62179126 allA SC0556 - ureidoglycolate hydrolase 552 55.07 0 620921..621739 + 272 62179127 allR SC0557 - DNA-binding transcriptional repressor AllR 553 45.56 -1 623626..624402 + 258 62179128 gip SC0558 - hydroxypyruvate isomerase 554 51.08 0 624503..625381 + 292 62179129 glxR SC0559 - tartronic semialdehyde reductase 555 45.99 -1 625447..626694 + 415 62179130 yhjE SC0560 - putative permease 556 45.57 -1 626790..628244 + 484 62179131 allP SC0561 - allantoin permease 557 51.54 0 628323..629684 + 453 62179132 allB SC0562 - allantoinase 558 51.50 0 629743..631041 + 432 62179133 ybbY SC0563 - putative purine permease YbbY 559 57.18 0 631064..632212 + 382 62179134 glxK SC0564 - glycerate kinase II 560 49.24 0 632292..633077 - 261 62179135 ylbA SC0565 - hypothetical protein 561 53.80 0 633088..634323 - 411 62179136 allC SC0566 - allantoate amidohydrolase 562 50.19 0 634345..635394 - 349 62179137 allD SC0567 - ureidoglycolate dehydrogenase 563 57.18 0 635710..637374 + 554 62179138 fdrA SC0568 - membrane protein FdrA 564 56.67 0 637384..638643 + 419 62179139 ylbE SC0569 - putative cytoplasmic protein 565 57.16 0 638655..639464 + 269 62179140 ylbF SC0570 - putative cytoplasmic protein 566 57.94 +1 639468..640361 + 297 62179141 arcC SC0571 - carbamate kinase 567 59.27 +1 640402..641469 - 355 62179142 purK SC0572 - phosphoribosylaminoimidazole carboxylase ATPase subunit 568 60.20 +1 641466..641975 - 169 62179143 purE SC0573 - phosphoribosylaminoimidazole carboxylase catalytic subunit 569 55.46 0 642093..642815 - 240 62179144 lpxH SC0574 - UDP-2,3-diacylglucosamine hydrolase 570 49.09 0 642818..643312 - 164 62179145 ppiB SC0575 - peptidyl-prolyl cis-trans isomerase B (rotamase B) 571 54.91 0 643485..644870 + 461 62179146 cysS SC0576 - cysteinyl-tRNA synthetase 572 51.64 0 644914..645738 - 274 62179147 - SC0577 - putative outer membrane protein 573 48.86 0 645735..646172 - 145 62179148 - SC0578 - putative inner membrane protein 574 53.48 0 646165..646710 - 181 62179149 ybcI SC0579 - putative membrane-bound metal-dependent hydrolase 575 56.81 0 646837..647049 - 70 162139606 ybcJ SC0580 - hypothetical protein 576 54.90 0 647051..647917 - 288 62179151 folD SC0581 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 577 53.37 0 648395..649018 + 207 62179152 fimA SC0582 - major type 1 subunit fimbrin (pilin) 578 54.31 0 649094..649627 + 177 62179153 fimI SC0583 - fimbrial protein internal segment 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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