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Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 432 56.28 0 493870..495072 - 400 62179007 sbcD SC0437 - exonuclease subunit SbcD 433 54.78 0 495287..495976 + 229 62179008 phoB SC0438 - transcriptional regulator PhoB 434 53.63 0 496046..497341 + 431 62179009 phoR SC0439 - phosphate regulon sensor protein 435 45.33 -1 497554..497703 - 49 62179010 - SC0440 - hypothetical protein 436 56.82 0 497750..499069 + 439 62179011 brnQ SC0441 - LIVCS family branched chain amino acid transporter system II (LIV-II) 437 54.40 0 498982..500514 + 510 62179012 proY SC0442 - putative proline-specific permease 438 57.98 +1 500676..502493 + 605 62179013 malZ SC0443 - maltodextrin glucosidase 439 53.23 0 502565..503167 - 200 62179014 tsaA SC0444 - putative thiol - alkyl hydroperoxide reductase 440 54.98 0 503377..503958 - 193 62179015 yajB SC0445 - acyl carrier protein phosphodiesterase 441 56.06 0 504052..505116 + 354 62179016 queA SC0446 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 442 52.04 0 505313..506440 + 375 62179017 tgt SC0447 - queuine tRNA-ribosyltransferase 443 51.95 0 506463..506795 + 110 62179018 yajC SC0448 - preprotein translocase subunit YajC 444 54.65 0 506823..508670 + 615 62179019 secD SC0449 - preprotein translocase subunit SecD 445 54.32 0 508681..509652 + 323 62179020 secF SC0450 - preprotein translocase subunit SecF 446 50.55 0 509797..510162 + 121 62179021 - SC0451 - hypothetical protein 447 52.67 0 510188..510880 + 230 62179022 - SC0452 - putative regulatory protein 448 50.29 0 511050..511397 + 115 62179023 yajD SC0453 - hypothetical protein 449 49.64 0 511948..512916 - 322 62179024 tsx SC0454 - nucleoside channel; receptor of phage T6 and colicin K 450 52.96 0 513111..513650 - 179 62179025 yajI SC0455 - hypothetical protein 451 49.56 0 513802..514251 + 149 62179026 ybaD SC0456 - transcriptional regulator NrdR 452 60.14 +1 514255..515358 + 367 62179027 ribD SC0457 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 453 54.35 0 515447..515917 + 156 62179028 ribH SC0458 - riboflavin synthase subunit beta 454 52.62 0 515938..516357 + 139 62179029 nusB SC0459 - transcription antitermination protein NusB 455 56.47 0 516436..517416 + 326 62179030 thiL SC0460 - thiamine monophosphate kinase 456 54.07 0 517394..517909 + 171 62179031 pgpA SC0461 - phosphatidylglycerophosphatase A 457 57.13 0 518013..518987 - 324 62179032 yajO SC0462 - putative oxidoreductase / K + channel protein 458 55.34 0 519044..520906 - 620 62179033 dxs SC0463 - 1-deoxy-D-xylulose-5-phosphate synthase 459 57.44 0 520930..521829 - 299 62179034 ispA SC0464 - geranyltranstransferase 460 54.32 0 521830..522072 - 80 62179035 xseB SC0465 - exodeoxyribonuclease VII small subunit 461 52.38 0 522282..523730 + 482 62179036 xseB SC0466 - thiamine biosynthesis protein ThiI 462 56.77 0 523774..524571 - 265 62179037 phnV SC0467 - 2-aminoethylphosphonate transporter, memrane component 463 57.14 0 524574..525434 - 286 62179038 phnU SC0468 - 2-aminoethylphosphonate transporter, memrane component 464 58.47 +1 525437..526546 - 369 62179039 phnT SC0469 - 2-aminoethylphosphonate transporter,ATPase component 465 56.61 0 526552..527565 - 337 62179040 phnS SC0470 - 2-aminoethylphosphonate transporter, periplasmic-binding component 466 58.61 +1 527763..528482 - 239 62179041 phnR SC0471 - 2-aminoethylphosphonate transport, repressor 467 56.61 0 528622..529725 + 367 62179042 phnW SC0472 - 2-aminoethylphosphonate--pyruvate transaminase 468 59.78 +1 529732..530544 + 270 62179043 phnX SC0473 - phosphonoacetaldehyde hydrolase 469 56.35 0 530641..531231 - 196 62179044 thiJ SC0474 - hypothetical protein 470 52.52 0 531194..532105 - 303 62179045 apbA SC0475 - 2-dehydropantoate 2-reductase 471 51.42 0 532231..532722 + 163 62179046 yajQ SC0476 - nucleotide-binding protein 472 55.45 0 532769..534061 - 430 62179047 yajR SC0477 - MFS family transporter 473 54.32 0 534361..534522 - 53 62179048 tnp SC0478 - IS903 transposase 474 43.58 -1 534670..536181 + 503 62179049 - SC0479 - putative periplasmic protein 475 49.80 0 536193..537662 + 489 62179050 ybeQ SC0480 - hypothetical protein 476 53.53 0 537710..538645 - 311 62179051 cyoE SC0481 - protoheme IX farnesyltransferase 477 51.21 0 538612..538941 - 109 62179052 cyoD SC0482 - cytochrome o ubiquinol oxidase subunit IV 478 53.66 0 538941..539555 - 204 62179053 cyoC SC0483 - cytochrome o ubiquinol oxidase subunit III 479 54.02 0 539545..541536 - 663 62179054 cyoB SC0484 - cytochrome o ubiquinol oxidase subunit I 480 50.68 0 541547..542503 - 318 62179055 cyoA SC0485 - cytochrome o ubiquinol oxidase subunit II 481 56.88 0 542956..544437 - 493 62179056 ampG SC0486 - muropeptide transporter 482 51.81 0 544475..545053 - 192 162139609 yajG SC0487 - hypothetical protein 483 49.51 0 545367..545675 + 102 62179058 bolA SC0488 - transcriptional regulator BolA 484 52.04 0 546022..547320 + 432 62179059 tig SC0489 - trigger factor 485 50.96 0 547568..548191 + 207 162139608 clpP SC0490 - ATP-dependent Clp protease proteolytic subunit 486 52.67 0 548443..549714 + 423 62179061 clpX SC0491 - ATP-dependent protease ATP-binding subunit 487 53.76 0 549900..552254 + 784 62179062 lon SC0492 - DNA-binding ATP-dependent protease La 488 49.45 0 552463..552735 + 90 62179063 hupB SC0493 - transcriptional regulator HU subunit beta 489 52.40 0 553026..554897 + 623 62179064 cypD SC0494 - peptidyl-prolyl cis-trans isomerase (rotamase D) 490 52.53 0 555047..555421 + 124 62179065 ybaV SC0495 - hypothetical protein 491 47.37 0 555525..555923 + 132 62179066 ybaW SC0496 - hypothetical protein 492 52.93 0 556029..556829 - 266 62179067 ybaX SC0497 - queuosine biosynthesis protein QueC 493 56.35 0 556789..558504 - 571 62179068 ybaE SC0498 - putative ABC transporter periplasmic binding protein 494 54.58 0 558590..559408 + 272 62179069 cof SC0499 - hypothetical protein 495 54.55 0 559458..560513 - 351 62179070 - SC0500 - putative cysteine synthase/cystathionine beta-synthase 496 51.63 0 560625..561083 + 152 62179071 ybaO SC0501 - putative transcriptional regulator (AsnC familiy) 497 55.27 0 561124..562896 + 590 62179072 mdlA SC0502 - putative multidrug transporter membrane\ATP-binding components 498 57.74 +1 562889..564670 + 593 62179073 mdlB SC0503 - putative multidrug transporter membrane\ATP-binding components 499 54.09 0 564674..564832 + 52 62179074 - SC0504 - hypothetical protein 500 52.80 0 564883..565221 + 112 62179075 glnK SC0505 - nitrogen regulatory protein P-II 2 501 55.86 0 565253..566548 + 431 62179076 amtB SC0506 - ammonium transporter 502 53.31 0 566648..567508 - 286 62179077 tesB SC0507 - acyl-CoA thioesterase II 503 54.21 0 567723..568292 + 189 62179078 ybaY SC0508 - glycoprotein/polysaccharide metabolism 504 55.90 0 568325..568714 - 129 62179079 ybaZ SC0509 - putative methyltransferase 505 52.22 0 568945..570495 - 516 62179080 ylaB SC0510 - diguanylate cyclase/phosphodiesterase domain-containing protein 506 43.68 -1 570720..570980 + 86 62179081 rpmE2 SC0511 - 50S ribosomal protein L31 type B 507 43.26 -1 570986..571126 + 46 62179082 rpmJ SC0512 - 50S ribosomal protein L36 508 49.04 0 571182..571652 - 156 62179083 ylaC SC0513 - hypothetical protein 509 49.46 0 571770..572321 - 183 62179084 maa SC0514 - maltose O-acetyltransferase 510 40.18 -2 572500..572718 - 72 62179085 hha SC0515 - hemolysin expression-modulating protein 511 42.13 -1 572746..573120 - 124 62179086 ybaJ SC0516 - hypothetical protein 512 54.44 0 573616..576765 - 1049 62179087 acrB SC0517 - acridine efflux system protein 513 55.16 0 576788..577873 - 361 62179088 acrA SC0518 - acridine efflux pump 514 52.57 0 578895..582257 + 1120 162139607 aefA SC0519 - potassium efflux protein KefA 515 52.81 0 582299..583222 - 307 62179090 - SC0520 - putative transposase 516 44.05 -1 583292..583459 - 55 62179091 ybaM SC0521 - hypothetical protein 517 58.90 +1 583473..584000 - 175 62179092 priC SC0522 - primosomal replication protein N'' 518 52.53 0 584051..584446 + 131 62179093 ybaN SC0523 - hypothetical protein 519 53.99 0 584599..585150 + 183 62179094 apt SC0524 - adenine phosphoribosyltransferase 520 59.05 +1 585264..587192 + 642 62179095 dnaX SC0525 - DNA polymerase III subunits gamma and tau 521 54.85 0 587238..587567 + 109 62179096 ybaB SC0526 - hypothetical protein 522 61.39 +1 587567..588172 + 201 62179097 recR SC0527 - recombination protein RecR 523 52.55 0 588259..590157 + 632 62179098 htpG SC0528 - heat shock protein 90 524 54.73 0 590399..591043 + 214 62179099 adk SC0529 - adenylate kinase 525 48.31 0 591056..591262 + 68 62179100 - SC0530 - hypothetical protein 526 56.80 0 591272..592234 + 320 62179101 hemH SC0531 - ferrochelatase 527 56.07 0 592231..593202 - 323 62179102 aes SC0532 - acetyl esterase 528 53.19 0 593310..594659 + 449 62179103 gsk SC0533 - inosine-guanosine kinase 529 57.01 0 594708..596384 - 558 62179104 ybaL SC0534 - putative cation:proton antiport protein 530 55.36 0 596599..597819 - 406 62179105 fsr SC0535 - MFS family transporter 531 51.85 0 597992..599644 + 550 62179106 ushA SC0536 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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