version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 393 46.61 0 447872..449830 + 652 62178968 mod SC0398 - DNA methylase; restriction system 394 49.01 0 449840..452812 + 990 62178969 res SC0399 - DNA restriction (DNA helicase 395 50.00 0 453090..453191 + 33 62178970 - SC0400 - putative cytoplasmic protein 396 55.34 0 453308..454711 + 467 62178971 cydA SC0401 - cytochrome BD2 subunit I 397 55.29 0 454708..455718 + 336 62178972 cydB SC0402 - cytochrome BD2 subunit II 398 56.89 0 455735..455959 + 74 62178973 - SC0403 - putative inner membrane protein 399 57.91 +1 456055..457059 + 334 62178974 - SC0404 - AraC family transcriptional regulator 400 52.82 0 457205..459313 + 702 62178975 foxA SC0405 - ferrioxamine receptor 401 53.55 0 459354..459986 - 210 62178976 yahN SC0406 - paral putative transport protein 402 44.20 -1 460218..460493 + 91 62178977 yahO SC0407 - hypothetical protein 403 55.54 0 460629..462254 - 541 62178978 prpR SC0408 - prp operon regulator 404 58.45 +1 462520..463407 + 295 62178979 prpB SC0409 - 2-methylisocitrate lyase 405 55.38 0 463530..464699 + 389 62178980 prpC SC0410 - methylcitrate synthase 406 56.89 0 464737..466188 + 483 62178981 prpD SC0411 - 2-methylcitrate dehydratase 407 58.93 +1 466229..468115 + 628 62178982 prpE SC0412 - propionyl-CoA synthetase 408 55.38 0 468222..469196 - 324 62178983 hemB SC0413 - delta-aminolevulinic acid dehydratase 409 45.29 -1 469709..472594 + 961 62178984 yaiU SC0414 - flagellar protein 410 43.11 -1 472680..473303 + 207 62178985 yaiV SC0415 - putative DNA-binding transcriptional regulator 411 52.68 0 473348..474505 - 385 62178986 ampH SC0416 - beta-lactamase/D-alanine carboxypeptidase 412 52.25 0 474852..476072 + 406 62178987 sbmA SC0417 - transport protein 413 55.16 0 476087..477181 + 364 62178988 yaiW SC0418 - putative outer membrane lipoprotein 414 53.40 0 477219..477527 - 102 62178989 yaiY SC0419 - hypothetical protein 415 48.61 0 477795..478010 + 71 62178990 yaiZ SC0420 - hypothetical protein 416 52.05 0 478036..479130 - 364 62178991 ddl SC0421 - D-alanyl-alanine synthetase A 417 54.06 0 479208..479921 + 237 62178992 - SC0422 - hypothetical protein 418 53.82 0 480325..481305 + 326 62178993 yceE SC0423 - putative permease 419 46.74 0 481602..481862 + 86 62178994 yaiB SC0424 - hypothetical protein 420 50.16 0 482211..482531 + 106 62178995 psiF SC0425 - hypothetical protein 421 55.26 0 482623..483735 + 370 62178996 yaiC SC0426 - diguanylate cyclase AdrA 422 56.17 0 483750..484559 - 269 62178997 proC SC0427 - pyrroline-5-carboxylate reductase 423 57.68 0 484699..485154 + 151 62178998 yaiI SC0428 - hypothetical protein 424 58.06 +1 485339..485884 + 181 62178999 aroL SC0429 - shikimate kinase II 425 52.60 0 485911..486102 + 63 62179000 yaiA SC0430 - hypothetical protein 426 50.15 0 486353..487030 + 225 62179001 aroM SC0431 - hypothetical protein 427 52.98 0 487101..487385 + 94 62179002 yaiE SC0432 - hypothetical protein 428 53.73 0 487423..488334 - 303 162139610 rdgC SC0433 - recombination associated protein 429 57.65 0 488460..489368 + 302 62179004 yajF SC0434 - fructokinase 430 55.75 0 489388..490560 - 390 62179005 araJ SC0435 - protein AraJ 431 58.36 +1 490733..493873 - 1046 62179006 sbcC SC0436 - exonuclease subunit SbcC 432 56.28 0 493870..495072 - 400 62179007 sbcD SC0437 - exonuclease subunit SbcD 433 54.78 0 495287..495976 + 229 62179008 phoB SC0438 - transcriptional regulator PhoB 434 53.63 0 496046..497341 + 431 62179009 phoR SC0439 - phosphate regulon sensor protein 435 45.33 -1 497554..497703 - 49 62179010 - SC0440 - hypothetical protein 436 56.82 0 497750..499069 + 439 62179011 brnQ SC0441 - LIVCS family branched chain amino acid transporter system II (LIV-II) 437 54.40 0 498982..500514 + 510 62179012 proY SC0442 - putative proline-specific permease 438 57.98 +1 500676..502493 + 605 62179013 malZ SC0443 - maltodextrin glucosidase 439 53.23 0 502565..503167 - 200 62179014 tsaA SC0444 - putative thiol - alkyl hydroperoxide reductase 440 54.98 0 503377..503958 - 193 62179015 yajB SC0445 - acyl carrier protein phosphodiesterase 441 56.06 0 504052..505116 + 354 62179016 queA SC0446 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 442 52.04 0 505313..506440 + 375 62179017 tgt SC0447 - queuine tRNA-ribosyltransferase 443 51.95 0 506463..506795 + 110 62179018 yajC SC0448 - preprotein translocase subunit YajC 444 54.65 0 506823..508670 + 615 62179019 secD SC0449 - preprotein translocase subunit SecD 445 54.32 0 508681..509652 + 323 62179020 secF SC0450 - preprotein translocase subunit SecF 446 50.55 0 509797..510162 + 121 62179021 - SC0451 - hypothetical protein 447 52.67 0 510188..510880 + 230 62179022 - SC0452 - putative regulatory protein 448 50.29 0 511050..511397 + 115 62179023 yajD SC0453 - hypothetical protein 449 49.64 0 511948..512916 - 322 62179024 tsx SC0454 - nucleoside channel; receptor of phage T6 and colicin K 450 52.96 0 513111..513650 - 179 62179025 yajI SC0455 - hypothetical protein 451 49.56 0 513802..514251 + 149 62179026 ybaD SC0456 - transcriptional regulator NrdR 452 60.14 +1 514255..515358 + 367 62179027 ribD SC0457 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 453 54.35 0 515447..515917 + 156 62179028 ribH SC0458 - riboflavin synthase subunit beta 454 52.62 0 515938..516357 + 139 62179029 nusB SC0459 - transcription antitermination protein NusB 455 56.47 0 516436..517416 + 326 62179030 thiL SC0460 - thiamine monophosphate kinase 456 54.07 0 517394..517909 + 171 62179031 pgpA SC0461 - phosphatidylglycerophosphatase A 457 57.13 0 518013..518987 - 324 62179032 yajO SC0462 - putative oxidoreductase / K + channel protein 458 55.34 0 519044..520906 - 620 62179033 dxs SC0463 - 1-deoxy-D-xylulose-5-phosphate synthase 459 57.44 0 520930..521829 - 299 62179034 ispA SC0464 - geranyltranstransferase 460 54.32 0 521830..522072 - 80 62179035 xseB SC0465 - exodeoxyribonuclease VII small subunit 461 52.38 0 522282..523730 + 482 62179036 xseB SC0466 - thiamine biosynthesis protein ThiI 462 56.77 0 523774..524571 - 265 62179037 phnV SC0467 - 2-aminoethylphosphonate transporter, memrane component 463 57.14 0 524574..525434 - 286 62179038 phnU SC0468 - 2-aminoethylphosphonate transporter, memrane component 464 58.47 +1 525437..526546 - 369 62179039 phnT SC0469 - 2-aminoethylphosphonate transporter,ATPase component 465 56.61 0 526552..527565 - 337 62179040 phnS SC0470 - 2-aminoethylphosphonate transporter, periplasmic-binding component 466 58.61 +1 527763..528482 - 239 62179041 phnR SC0471 - 2-aminoethylphosphonate transport, repressor 467 56.61 0 528622..529725 + 367 62179042 phnW SC0472 - 2-aminoethylphosphonate--pyruvate transaminase 468 59.78 +1 529732..530544 + 270 62179043 phnX SC0473 - phosphonoacetaldehyde hydrolase 469 56.35 0 530641..531231 - 196 62179044 thiJ SC0474 - hypothetical protein 470 52.52 0 531194..532105 - 303 62179045 apbA SC0475 - 2-dehydropantoate 2-reductase 471 51.42 0 532231..532722 + 163 62179046 yajQ SC0476 - nucleotide-binding protein 472 55.45 0 532769..534061 - 430 62179047 yajR SC0477 - MFS family transporter 473 54.32 0 534361..534522 - 53 62179048 tnp SC0478 - IS903 transposase 474 43.58 -1 534670..536181 + 503 62179049 - SC0479 - putative periplasmic protein 475 49.80 0 536193..537662 + 489 62179050 ybeQ SC0480 - hypothetical protein 476 53.53 0 537710..538645 - 311 62179051 cyoE SC0481 - protoheme IX farnesyltransferase 477 51.21 0 538612..538941 - 109 62179052 cyoD SC0482 - cytochrome o ubiquinol oxidase subunit IV 478 53.66 0 538941..539555 - 204 62179053 cyoC SC0483 - cytochrome o ubiquinol oxidase subunit III 479 54.02 0 539545..541536 - 663 62179054 cyoB SC0484 - cytochrome o ubiquinol oxidase subunit I 480 50.68 0 541547..542503 - 318 62179055 cyoA SC0485 - cytochrome o ubiquinol oxidase subunit II 481 56.88 0 542956..544437 - 493 62179056 ampG SC0486 - muropeptide transporter 482 51.81 0 544475..545053 - 192 162139609 yajG SC0487 - hypothetical protein 483 49.51 0 545367..545675 + 102 62179058 bolA SC0488 - transcriptional regulator BolA 484 52.04 0 546022..547320 + 432 62179059 tig SC0489 - trigger factor 485 50.96 0 547568..548191 + 207 162139608 clpP SC0490 - ATP-dependent Clp protease proteolytic subunit 486 52.67 0 548443..549714 + 423 62179061 clpX SC0491 - ATP-dependent protease ATP-binding subunit 487 53.76 0 549900..552254 + 784 62179062 lon SC0492 - DNA-binding ATP-dependent protease La 488 49.45 0 552463..552735 + 90 62179063 hupB SC0493 - transcriptional regulator HU subunit beta 489 52.40 0 553026..554897 + 623 62179064 cypD SC0494 - peptidyl-prolyl cis-trans isomerase (rotamase D) 490 52.53 0 555047..555421 + 124 62179065 ybaV SC0495 - hypothetical protein 491 47.37 0 555525..555923 + 132 62179066 ybaW SC0496 - hypothetical protein 492 52.93 0 556029..556829 - 266 62179067 ybaX SC0497 - queuosine biosynthesis protein QueC 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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