version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3949 56.59 0 4227381..4228889 - 502 62182545 glpK SC3975 - glycerol kinase 3950 52.84 0 4228910..4229755 - 281 62182546 glpF SC3976 - MIP channel, glycerol diffusion 3951 47.08 0 4230154..4230393 + 79 62182547 yiiU SC3977 - hypothetical protein 3952 54.53 0 4230615..4231100 - 161 62182548 menG SC3978 - ribonuclease activity regulator protein RraA 3953 55.48 0 4231193..4232122 - 309 62182549 menA SC3979 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3954 53.00 0 4232189..4233520 - 443 62182550 hslU SC3980 - ATP-dependent protease ATP-binding subunit 3955 53.86 0 4233530..4234060 - 176 62182551 hslV SC3981 - ATP-dependent protease peptidase subunit 3956 58.84 +1 4234152..4235147 - 331 62182552 ftsN SC3982 - essential cell division protein 3957 53.80 0 4235241..4236266 - 341 162139515 cytR SC3983 - DNA-binding transcriptional regulator CytR 3958 59.30 +1 4236421..4238619 - 732 62182554 priA SC3984 - primosome assembly protein PriA 3959 48.83 0 4238823..4239035 + 70 162139514 rpmE SC3985 - 50S ribosomal protein L31 3960 50.50 0 4239137..4239538 + 133 62182556 - SC3986 - putative cytoplasmic protein 3961 50.15 0 4239709..4240392 + 227 62182557 yis2 SC3987 - putative integrase protein 3962 49.77 0 4240396..4241058 - 220 62182558 - SC3988 - putative outer membrane lipoprotein 3963 47.79 0 4241259..4243049 - 596 62182559 - SC3989 - putative arylsulfate sulfotransferase 3964 51.89 0 4243507..4243824 - 105 62182560 metJ SC3990 - transcriptional repressor protein MetJ 3965 56.16 0 4244089..4245249 + 386 62182561 metB SC3991 - cystathionine gamma-synthase 3966 59.15 +1 4245252..4247684 + 810 62182562 metL SC3992 - bifunctional aspartate kinase II/homoserine dehydrogenase II 3967 46.74 0 4247800..4248657 - 285 62182563 - SC3993 - putative inner membrane protein 3968 45.78 -1 4248660..4249358 - 232 62182564 - SC3994 - hypothetical protein 3969 43.64 -1 4249367..4249657 - 96 62182565 - SC3995 - hypothetical protein 3970 51.47 0 4249892..4251016 - 374 62182566 - SC3996 - hypothetical protein 3971 52.86 0 4252902..4253792 + 296 62182567 metF SC3997 - 5,10-methylenetetrahydrofolate reductase 3972 57.54 0 4253957..4256137 + 726 62182568 katG SC3998 - catalase; hydroperoxidase HPI(I) 3973 49.84 0 4256195..4256818 - 207 62182569 yijF SC3999 - putative periplasmic protein 3974 57.92 +1 4257077..4258174 - 365 62182570 gldA SC4000 - glycerol dehydrogenase 3975 55.35 0 4258186..4258848 - 220 62182571 talC SC4001 - fructose-6-phosphate aldolase 3976 57.71 0 4258859..4261360 - 833 62182572 ptsA SC4002 - general PTS family protein I 3977 56.94 0 4261669..4262748 + 359 62182573 frwC SC4003 - putative fructose-like permease EIIC subunit 2 3978 50.16 0 4262763..4263083 + 106 62182574 frwB SC4004 - putative fructose-like phosphotransferase EIIB subunit 2 3979 54.72 0 4265444..4266322 + 292 62182575 pflC SC4005 - pyruvate formate lyase II activase 3980 55.93 0 4266324..4266677 + 117 62182576 frwD SC4006 - putative fructose-like phosphotransferase EIIB subunit 3 3981 56.22 0 4266664..4267515 - 283 62182577 yijO SC4007 - paral regulator 3982 52.60 0 4267676..4269409 - 577 62182578 yijP SC4008 - hypothetical protein 3983 57.05 0 4269620..4272271 - 883 62182579 ppc SC4009 - phosphoenolpyruvate carboxylase 3984 53.56 0 4272640..4273791 - 383 62182580 argE SC4010 - acetylornithine deacetylase 3985 53.63 0 4273880..4274884 + 334 62182581 argC SC4011 - N-acetyl-gamma-glutamyl-phosphate reductase 3986 57.88 +1 4274895..4275668 + 257 62182582 argB SC4012 - acetylglutamate kinase 3987 56.94 0 4275786..4277162 + 458 62182583 argH SC4013 - argininosuccinate lyase 3988 56.21 0 4277449..4278366 + 305 62182584 oxyR SC4014 - DNA-binding transcriptional regulator OxyR 3989 52.68 0 4278349..4279749 - 466 62182585 udhA SC4015 - soluble pyridine nucleotide transhydrogenase 3990 55.82 0 4279948..4280583 + 211 62182586 yijC SC4016 - DNA-binding transcriptional repressor FabR 3991 51.94 0 4280599..4280958 + 119 62182587 yijD SC4017 - hypothetical protein 3992 51.86 0 4281005..4282105 - 366 62182588 trmA SC4018 - tRNA (uracil-5-)-methyltransferase 3993 51.40 0 4282437..4284323 + 628 62182589 btuB SC4019 - vitamin B12/cobalamin outer membrane transporter 3994 54.58 0 4284268..4285119 + 283 62182590 murI SC4020 - glutamate racemase 3995 53.35 0 4290689..4291717 + 342 62182595 murB SC4025 - UDP-N-acetylenolpyruvoylglucosamine reductase 3996 49.33 0 4291714..4292676 + 320 62182596 birA SC4026 - biotin--protein ligase 3997 45.45 -1 4292711..4293667 - 318 62182597 coaA SC4027 - pantothenate kinase 3998 41.38 -1 4293870..4294043 - 57 62182598 gns SC4028 - putative cytoplasmic protein 3999 48.72 0 4294246..4294362 + 38 62182599 - SC4029 - hypothetical protein 4000 54.01 0 4294620..4295804 + 394 62182600 tuf SC4030 - elongation factor Tu 4001 55.47 0 4296034..4296417 + 127 62182601 secE SC4031 - preprotein translocase subunit SecE 4002 54.40 0 4296419..4296964 + 181 62182602 nusG SC4032 - transcription antitermination protein NusG 4003 52.68 0 4297122..4297550 + 142 62182603 rplK SC4033 - 50S ribosomal protein L11 4004 53.19 0 4297554..4298258 + 234 62182604 rplA SC4034 - 50S ribosomal protein L1 4005 52.21 0 4298678..4299175 + 165 62182605 rplJ SC4035 - 50S ribosomal protein L10 4006 46.17 -1 4299242..4299607 + 121 162139513 rplL SC4036 - 50S ribosomal protein L7/L12 4007 54.16 0 4299811..4303953 + 1380 62182607 rpoB SC4037 - DNA-directed RNA polymerase subunit beta 4008 54.40 0 4304030..4308253 + 1407 62182608 rpoC SC4038 - DNA-directed RNA polymerase subunit beta' 4009 30.58 -2 4308295..4308621 + 108 62182609 - SC4039 - putative inner membrane protein 4010 34.42 -2 4309366..4310376 + 336 62182610 - SC4040 - putative cytoplasmic protein 4011 57.94 +1 4310597..4311730 - 377 62182611 thiH SC4041 - thiamine biosynthesis protein ThiH 4012 63.04 +1 4311727..4312497 - 256 162139512 thiG SC4042 - thiazole synthase 4013 58.76 +1 4312680..4313438 - 252 62182613 thiF SC4043 - thiamine biosynthesis protein ThiF 4014 60.06 +1 4313431..4314066 - 211 62182614 thiE SC4044 - thiamine-phosphate pyrophosphorylase 4015 58.39 +1 4314066..4315961 - 631 62182615 thiC SC4045 - thiamine biosynthesis protein ThiC 4016 49.49 0 4316325..4316813 - 162 62182616 rsd SC4046 - anti-RNA polymerase sigma 70 factor 4017 55.17 0 4316906..4317679 + 257 62182617 nudC SC4047 - NADH pyrophosphatase 4018 57.37 0 4317720..4318784 + 354 62182618 hemE SC4048 - uroporphyrinogen decarboxylase 4019 58.93 +1 4318794..4319465 + 223 62182619 nfi SC4049 - endonuclease V 4020 49.58 0 4319507..4320097 + 196 62182620 yjaG SC4050 - hypothetical protein 4021 47.62 0 4320284..4320556 + 90 62182621 hupA SC4051 - transcriptional regulator HU subunit alpha 4022 54.83 0 4320568..4321260 + 230 62182622 yjaH SC4052 - hypothetical protein 4023 56.14 0 4321302..4321757 - 151 62182623 zraP SC4053 - zinc resistance protein 4024 53.93 0 4321744..4323408 + 554 62182624 hydH SC4054 - sensor protein ZraS 4025 55.58 0 4323414..4324739 + 441 62182625 hydG SC4055 - transcriptional regulatory protein ZraR 4026 61.23 +1 4324776..4326026 - 416 62182626 purD SC4056 - phosphoribosylamine--glycine ligase 4027 57.14 0 4333375..4333605 + 76 62182629 - SC4059 - hypothetical protein 4028 48.17 0 4333596..4334033 - 145 62182630 yjaB SC4060 - hypothetical protein 4029 49.46 0 4334190..4335119 + 309 62182631 metA SC4061 - homoserine O-succinyltransferase 4030 52.00 0 4335388..4336989 + 533 62182632 aceB SC4062 - malate synthase 4031 56.25 0 4337021..4338325 + 434 62182633 aceA SC4063 - isocitrate lyase 4032 52.57 0 4338427..4340178 + 583 62182634 aceK SC4064 - bifunctional isocitrate dehydrogenase kinase/phosphatase protein 4033 58.39 +1 4340142..4340576 - 144 62182635 - SC4065 - putative cytoplasmic protein 4034 58.55 +1 4340560..4341384 - 274 62182636 iclR SC4066 - transcriptional repressor IclR 4035 57.84 +1 4341694..4345377 + 1227 162139511 metH SC4067 - B12-dependent methionine synthase 4036 44.83 -1 4345931..4347139 + 402 62182638 TnpR SC4068 - transposase of Tn10 4037 57.83 +1 4348688..4349377 - 229 62182639 pepE SC4069 - peptidase E 4038 49.02 0 4349449..4349550 + 33 62182640 - SC4070 - putative cytoplasmic protein 4039 43.70 -1 4349585..4350124 + 179 62182641 yaiL SC4071 - hypothetical protein 4040 50.11 0 4350171..4351040 + 289 62182642 yjbC SC4072 - 23S rRNA pseudouridine synthase F 4041 55.00 0 4351037..4351336 - 99 62182643 yjbD SC4073 - hypothetical protein 4042 55.41 0 4351407..4352348 - 313 62182644 ybaS SC4074 - putative Na+-dependent transporter 4043 54.49 0 4352466..4352621 + 51 62182645 - SC4075 - hypothetical protein 4044 38.55 -2 4352610..4353338 - 242 62182646 - SC4076 - putative cytoplasmic protein 4045 34.19 -2 4353535..4353885 - 116 62182647 - SC4077 - putative inner membrane protein 4046 54.61 0 4354076..4354531 - 151 62182648 - SC4078 - putative cytoplasmic protein 4047 44.72 -1 4354528..4355142 - 204 62182649 - SC4079 - putative cytoplasmic protein 4048 52.92 0 4355149..4356807 - 552 62182650 vph SC4080 - putative phage tail fiber protein H 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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