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Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 347 50.68 0 392143..392580 + 145 62178920 enpP SC0350 - Rz lysis protein 348 42.94 -1 392786..393274 + 162 62178922 - SC0352 - hypothetical protein 349 45.68 -1 393765..394007 + 80 62178923 - SC0353 - hypothetical protein 350 50.47 0 394509..396008 + 499 62178924 - SC0354 - gp2-like protein 351 50.92 0 396009..398174 + 721 62178925 - SC0355 - putative packaging glycoprotein 352 52.85 0 398188..399099 + 303 62178926 - SC0356 - scaffolding protein 353 50.69 0 399099..400394 + 431 62178927 - SC0357 - coat protein 354 49.30 0 400653..401153 + 166 62178928 - SC0358 - DNA stabilization protein 355 50.81 0 401154..402572 + 472 62178929 - SC0359 - DNA stabilization protein 356 43.19 -1 402576..403214 + 212 62178930 - SC0360 - packaged DNA stabilization protein gp26 357 49.56 0 403214..403669 + 151 62178931 - SC0361 - hypothetical protein 358 53.19 0 403672..404361 + 229 62178932 - SC0362 - DNA transfer protein gp7 precursor 359 51.44 0 404404..405723 + 439 62178933 - SC0363 - DNA transfer protein gp20 360 51.25 0 405723..407636 + 637 62178934 - SC0364 - TPA: injection protein 361 34.55 -2 407654..407983 - 109 62178936 - SC0366 - hypothetical protein 362 43.33 -1 408223..409983 + 586 62178937 - SC0367 - hypothetical protein 363 38.97 -2 410259..411713 - 484 62178938 - SC0368 - hypothetical protein 364 46.49 0 411703..412629 - 308 62178939 gtrB SC0369 - bactoprenol glucosyl transferase 365 41.19 -1 412629..412997 - 122 62178940 gtrA SC0370 - bactoprenol-linked glucose translocase 366 54.40 0 413672..414535 - 287 62178941 insF SC0371 - putative IS3 transposase 367 46.30 0 415277..415600 + 107 62178942 yoaC SC0372 - putative cytoplasmic protein 368 42.68 -1 415842..417179 + 445 62178943 ynfM SC0373 - putative permease 369 51.27 0 417311..418732 + 473 62178944 ledL SC0374 - isopropylmalate isomerase large subunit 370 51.83 0 418734..419360 + 208 62178945 ledS SC0375 - putative 3-isopropylmalate isomerase (dehydratase), subunit with LeuC 371 49.94 0 419375..420253 + 292 62178946 faaH SC0376 - putative fumarylacetoacetate (FAA) hydrolase 372 51.58 0 420253..421167 + 304 62178947 deh SC0377 - putative hydrolase or acyltransferase 373 48.96 0 421201..422166 + 321 62178948 ygiP SC0378 - LysR family transcriptional regulator 374 35.59 -2 423074..423472 + 132 62178949 - SC0379 - putative outer membrane protein 375 52.04 0 424244..425569 - 441 62178950 stbD SC0380 - putative fimbriae; usher 376 54.06 0 425574..428135 - 853 62178951 stbC SC0381 - putative fimbriae; usher 377 45.41 -1 428119..428880 - 253 62178952 stbB SC0382 - putative fimbriae; chaparone 378 47.49 0 428942..429478 - 178 62178953 stbA SC0383 - putative fimbriae; major subunit 379 36.08 -2 430112..430876 + 254 62178954 - SC0384 - putative inner membrane protein 380 37.92 -2 430849..431349 + 166 62178955 - SC0385 - putative periplasmic protein 381 48.51 0 431649..433223 + 524 62178956 rtn SC0386 - diguanylate cyclase/phosphodiesterase domain-containing protein 382 40.19 -2 433323..434066 + 247 62178957 - SC0387 - putative response regulator 383 39.47 -2 434039..434527 + 162 62178958 - SC0388 - putative inner membrane protein 384 40.76 -1 434928..435452 + 174 62178959 ail SC0389 - hypothetical protein 385 40.03 -2 435596..436237 + 213 62178960 - SC0390 - putative response regulator 386 35.56 -2 436248..436472 + 74 62178961 - SC0391 - putative inner membrane protein 387 48.89 0 436530..436889 + 119 62178962 yjeI SC0392 - putative outer membrane lipoprotein 388 59.53 +1 436959..438416 - 485 62178963 oprM SC0393 - outer membrane efflux protein-like protein 389 60.47 +1 441597..442823 - 408 62178964 mtrC SC0394 - putative cation efflux pump 390 54.41 0 445402..445866 + 154 62178965 hmrR SC0395 - putative transcriptional regulator 391 57.95 +1 445944..446138 + 64 62178966 hmb SC0396 - putative copper chaperone 392 54.23 0 446430..447683 + 417 62178967 jen SC0397 - putative inner membrane protein 393 46.61 0 447872..449830 + 652 62178968 mod SC0398 - DNA methylase; restriction system 394 49.01 0 449840..452812 + 990 62178969 res SC0399 - DNA restriction (DNA helicase 395 50.00 0 453090..453191 + 33 62178970 - SC0400 - putative cytoplasmic protein 396 55.34 0 453308..454711 + 467 62178971 cydA SC0401 - cytochrome BD2 subunit I 397 55.29 0 454708..455718 + 336 62178972 cydB SC0402 - cytochrome BD2 subunit II 398 56.89 0 455735..455959 + 74 62178973 - SC0403 - putative inner membrane protein 399 57.91 +1 456055..457059 + 334 62178974 - SC0404 - AraC family transcriptional regulator 400 52.82 0 457205..459313 + 702 62178975 foxA SC0405 - ferrioxamine receptor 401 53.55 0 459354..459986 - 210 62178976 yahN SC0406 - paral putative transport protein 402 44.20 -1 460218..460493 + 91 62178977 yahO SC0407 - hypothetical protein 403 55.54 0 460629..462254 - 541 62178978 prpR SC0408 - prp operon regulator 404 58.45 +1 462520..463407 + 295 62178979 prpB SC0409 - 2-methylisocitrate lyase 405 55.38 0 463530..464699 + 389 62178980 prpC SC0410 - methylcitrate synthase 406 56.89 0 464737..466188 + 483 62178981 prpD SC0411 - 2-methylcitrate dehydratase 407 58.93 +1 466229..468115 + 628 62178982 prpE SC0412 - propionyl-CoA synthetase 408 55.38 0 468222..469196 - 324 62178983 hemB SC0413 - delta-aminolevulinic acid dehydratase 409 45.29 -1 469709..472594 + 961 62178984 yaiU SC0414 - flagellar protein 410 43.11 -1 472680..473303 + 207 62178985 yaiV SC0415 - putative DNA-binding transcriptional regulator 411 52.68 0 473348..474505 - 385 62178986 ampH SC0416 - beta-lactamase/D-alanine carboxypeptidase 412 52.25 0 474852..476072 + 406 62178987 sbmA SC0417 - transport protein 413 55.16 0 476087..477181 + 364 62178988 yaiW SC0418 - putative outer membrane lipoprotein 414 53.40 0 477219..477527 - 102 62178989 yaiY SC0419 - hypothetical protein 415 48.61 0 477795..478010 + 71 62178990 yaiZ SC0420 - hypothetical protein 416 52.05 0 478036..479130 - 364 62178991 ddl SC0421 - D-alanyl-alanine synthetase A 417 54.06 0 479208..479921 + 237 62178992 - SC0422 - hypothetical protein 418 53.82 0 480325..481305 + 326 62178993 yceE SC0423 - putative permease 419 46.74 0 481602..481862 + 86 62178994 yaiB SC0424 - hypothetical protein 420 50.16 0 482211..482531 + 106 62178995 psiF SC0425 - hypothetical protein 421 55.26 0 482623..483735 + 370 62178996 yaiC SC0426 - diguanylate cyclase AdrA 422 56.17 0 483750..484559 - 269 62178997 proC SC0427 - pyrroline-5-carboxylate reductase 423 57.68 0 484699..485154 + 151 62178998 yaiI SC0428 - hypothetical protein 424 58.06 +1 485339..485884 + 181 62178999 aroL SC0429 - shikimate kinase II 425 52.60 0 485911..486102 + 63 62179000 yaiA SC0430 - hypothetical protein 426 50.15 0 486353..487030 + 225 62179001 aroM SC0431 - hypothetical protein 427 52.98 0 487101..487385 + 94 62179002 yaiE SC0432 - hypothetical protein 428 53.73 0 487423..488334 - 303 162139610 rdgC SC0433 - recombination associated protein 429 57.65 0 488460..489368 + 302 62179004 yajF SC0434 - fructokinase 430 55.75 0 489388..490560 - 390 62179005 araJ SC0435 - protein AraJ 431 58.36 +1 490733..493873 - 1046 62179006 sbcC SC0436 - exonuclease subunit SbcC 432 56.28 0 493870..495072 - 400 62179007 sbcD SC0437 - exonuclease subunit SbcD 433 54.78 0 495287..495976 + 229 62179008 phoB SC0438 - transcriptional regulator PhoB 434 53.63 0 496046..497341 + 431 62179009 phoR SC0439 - phosphate regulon sensor protein 435 45.33 -1 497554..497703 - 49 62179010 - SC0440 - hypothetical protein 436 56.82 0 497750..499069 + 439 62179011 brnQ SC0441 - LIVCS family branched chain amino acid transporter system II (LIV-II) 437 54.40 0 498982..500514 + 510 62179012 proY SC0442 - putative proline-specific permease 438 57.98 +1 500676..502493 + 605 62179013 malZ SC0443 - maltodextrin glucosidase 439 53.23 0 502565..503167 - 200 62179014 tsaA SC0444 - putative thiol - alkyl hydroperoxide reductase 440 54.98 0 503377..503958 - 193 62179015 yajB SC0445 - acyl carrier protein phosphodiesterase 441 56.06 0 504052..505116 + 354 62179016 queA SC0446 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 442 52.04 0 505313..506440 + 375 62179017 tgt SC0447 - queuine tRNA-ribosyltransferase 443 51.95 0 506463..506795 + 110 62179018 yajC SC0448 - preprotein translocase subunit YajC 444 54.65 0 506823..508670 + 615 62179019 secD SC0449 - preprotein translocase subunit SecD 445 54.32 0 508681..509652 + 323 62179020 secF SC0450 - preprotein translocase subunit SecF 446 50.55 0 509797..510162 + 121 62179021 - SC0451 - hypothetical protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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