version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3897 44.33 -1 4174993..4175283 + 96 62182493 - SC3923 - MerR family regulatory protein 3898 58.39 +1 4175330..4176259 - 309 62182494 fdhE SC3924 - formate dehydrogenase accessory protein FdhE 3899 52.04 0 4176256..4176891 - 211 62182495 fdoI SC3925 - formate dehydrogenase-O subunit gamma 3900 58.47 +1 4176888..4177790 - 300 62182496 fdoH SC3926 - formate dehydrogenase-O, Fe-S subunit 3901 55.20 0 4181048..4181884 + 278 62182497 fdhD SC3927 - formate dehydrogenase accessory protein 3902 44.09 -1 4182149..4183180 - 343 62182498 - SC3928 - putative inner membrane lipoprotein 3903 45.41 -1 4183363..4184463 + 366 62182499 yiiG SC3929 - putative cytoplasmic protein 3904 54.01 0 4184818..4185141 - 107 62182500 - SC3930 - hypothetical protein 3905 57.58 0 4185141..4185800 - 219 62182501 - SC3931 - hypothetical protein 3906 57.07 0 4185835..4186449 + 204 62182502 - SC3932 - hypothetical protein 3907 54.29 0 4186538..4186852 - 104 62182503 yiiL SC3933 - hypothetical protein 3908 57.44 0 4186849..4187997 - 382 62182504 adh2 SC3934 - putative iron-containing alcohol dehydrogenase 3909 54.95 0 4188124..4188951 - 275 62182505 rhaD SC3935 - rhamnulose-1-phosphate aldolase 3910 58.65 +1 4189094..4190353 - 419 62182506 rhaA SC3936 - L-rhamnose isomerase 3911 54.97 0 4190350..4191819 - 489 62182507 rhaB SC3937 - rhamnulokinase 3912 53.76 0 4192107..4192943 + 278 62182508 rhaS SC3938 - transcriptional activator RhaS 3913 50.18 0 4193096..4193944 + 282 62182509 rhaR SC3939 - transcriptional activator RhaR 3914 53.04 0 4193941..4194975 - 344 62182510 rhaT SC3940 - rhamnose-proton symporter 3915 42.69 -1 4194940..4195110 + 56 62182511 - SC3941 - hypothetical protein 3916 41.96 -1 4195594..4196277 + 227 62182512 yiiY SC3942 - hypothetical protein 3917 51.99 0 4196436..4197743 - 435 62182513 ygiK SC3943 - putative C4-dicarboxylate transport system 3918 50.58 0 4197736..4198251 - 171 62182514 - SC3944 - putative C4-dicarboxylate transport system 3919 53.05 0 4198270..4199253 - 327 62182515 yiiZ SC3945 - putative dicarboxylate-binding periplasmic protein 3920 54.27 0 4199582..4200202 + 206 62182516 sodA SC3946 - superoxide dismutase 3921 57.25 0 4200272..4200961 + 229 162139517 yiiM SC3947 - hypothetical protein 3922 54.29 0 4200973..4201368 + 131 62182518 - SC3948 - putative inner membrane protein 3923 57.42 0 4201419..4202792 - 457 62182519 cpxA SC3949 - two-component sensor protein 3924 54.36 0 4202789..4203487 - 232 62182520 cpxR SC3950 - DNA-binding transcriptional regulator CpxR 3925 50.50 0 4203638..4204138 + 166 62182521 cpxP SC3951 - periplasmic repressor CpxP 3926 52.05 0 4204285..4205187 + 300 62182522 fieF SC3952 - ferrous iron efflux protein F 3927 53.27 0 4205372..4206334 + 320 62182523 pfkA SC3953 - 6-phosphofructokinase 3928 52.12 0 4206538..4207527 + 329 62182524 sbp SC3954 - sulfate transporter subunit 3929 52.97 0 4207493..4208383 + 296 62182525 ushB SC3955 - CDP-diacylglycerol pyrophosphatase 3930 50.04 0 4208646..4209980 + 444 62182526 yicJ SC3956 - Na+:galactoside symporter family permease 3931 58.85 +1 4209991..4210950 + 319 62182527 - SC3957 - aminoimidazole riboside kinase 3932 57.06 0 4210960..4212000 + 346 62182528 yegU SC3958 - putative ADP-ribosylglycohydrolase 3933 51.18 0 4212063..4212785 + 240 62182529 farR SC3959 - GntR family transcriptional regulator 3934 51.28 0 4212883..4213194 + 103 62182530 cdh SC3960 - putative periplasmic protein 3935 47.58 0 4213284..4213634 - 116 62182531 - SC3961 - putative mannose-6-phosphate isomerase 3936 54.87 0 4213648..4215240 - 530 62182532 ydeV SC3962 - autoinducer-2 (AI-2) kinase 3937 50.52 0 4215327..4216286 - 319 62182533 ydeW SC3963 - putative transcriptional repressor 3938 53.07 0 4218070..4219113 + 347 62182534 ydeY SC3964 - sugar ABC transporter membrane subunit 3939 49.55 0 4219113..4220111 + 332 62182535 ydeZ SC3965 - sugar ABC transporter membrane subunit 3940 50.44 0 4220140..4221162 + 340 62182536 yneA SC3966 - sugar ABC transporter periplasmic subunit 3941 47.15 0 4221191..4222066 + 291 62182537 yneB SC3967 - aldolase 3942 43.03 -1 4222110..4222439 + 109 62182538 yneC SC3968 - autoinducer-2 (AI-2) modifying protein LsrG 3943 51.76 0 4222449..4223213 + 254 62182539 rpe SC3969 - ribulose-phosphate 3-epimerase 3944 54.69 0 4223305..4224072 - 255 62182540 tpiA SC3970 - triosephosphate isomerase 3945 52.00 0 4224185..4224784 - 199 62182541 yiiQ SC3971 - hypothetical protein 3946 55.48 0 4224882..4225310 + 142 62182542 yiiR SC3972 - hypothetical protein 3947 55.69 0 4225416..4226162 - 248 62182543 fpr SC3973 - ferredoxin-NADP reductase 3948 59.05 +1 4226259..4227269 - 336 162139516 glpX SC3974 - fructose 1,6-bisphosphatase II 3949 56.59 0 4227381..4228889 - 502 62182545 glpK SC3975 - glycerol kinase 3950 52.84 0 4228910..4229755 - 281 62182546 glpF SC3976 - MIP channel, glycerol diffusion 3951 47.08 0 4230154..4230393 + 79 62182547 yiiU SC3977 - hypothetical protein 3952 54.53 0 4230615..4231100 - 161 62182548 menG SC3978 - ribonuclease activity regulator protein RraA 3953 55.48 0 4231193..4232122 - 309 62182549 menA SC3979 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3954 53.00 0 4232189..4233520 - 443 62182550 hslU SC3980 - ATP-dependent protease ATP-binding subunit 3955 53.86 0 4233530..4234060 - 176 62182551 hslV SC3981 - ATP-dependent protease peptidase subunit 3956 58.84 +1 4234152..4235147 - 331 62182552 ftsN SC3982 - essential cell division protein 3957 53.80 0 4235241..4236266 - 341 162139515 cytR SC3983 - DNA-binding transcriptional regulator CytR 3958 59.30 +1 4236421..4238619 - 732 62182554 priA SC3984 - primosome assembly protein PriA 3959 48.83 0 4238823..4239035 + 70 162139514 rpmE SC3985 - 50S ribosomal protein L31 3960 50.50 0 4239137..4239538 + 133 62182556 - SC3986 - putative cytoplasmic protein 3961 50.15 0 4239709..4240392 + 227 62182557 yis2 SC3987 - putative integrase protein 3962 49.77 0 4240396..4241058 - 220 62182558 - SC3988 - putative outer membrane lipoprotein 3963 47.79 0 4241259..4243049 - 596 62182559 - SC3989 - putative arylsulfate sulfotransferase 3964 51.89 0 4243507..4243824 - 105 62182560 metJ SC3990 - transcriptional repressor protein MetJ 3965 56.16 0 4244089..4245249 + 386 62182561 metB SC3991 - cystathionine gamma-synthase 3966 59.15 +1 4245252..4247684 + 810 62182562 metL SC3992 - bifunctional aspartate kinase II/homoserine dehydrogenase II 3967 46.74 0 4247800..4248657 - 285 62182563 - SC3993 - putative inner membrane protein 3968 45.78 -1 4248660..4249358 - 232 62182564 - SC3994 - hypothetical protein 3969 43.64 -1 4249367..4249657 - 96 62182565 - SC3995 - hypothetical protein 3970 51.47 0 4249892..4251016 - 374 62182566 - SC3996 - hypothetical protein 3971 52.86 0 4252902..4253792 + 296 62182567 metF SC3997 - 5,10-methylenetetrahydrofolate reductase 3972 57.54 0 4253957..4256137 + 726 62182568 katG SC3998 - catalase; hydroperoxidase HPI(I) 3973 49.84 0 4256195..4256818 - 207 62182569 yijF SC3999 - putative periplasmic protein 3974 57.92 +1 4257077..4258174 - 365 62182570 gldA SC4000 - glycerol dehydrogenase 3975 55.35 0 4258186..4258848 - 220 62182571 talC SC4001 - fructose-6-phosphate aldolase 3976 57.71 0 4258859..4261360 - 833 62182572 ptsA SC4002 - general PTS family protein I 3977 56.94 0 4261669..4262748 + 359 62182573 frwC SC4003 - putative fructose-like permease EIIC subunit 2 3978 50.16 0 4262763..4263083 + 106 62182574 frwB SC4004 - putative fructose-like phosphotransferase EIIB subunit 2 3979 54.72 0 4265444..4266322 + 292 62182575 pflC SC4005 - pyruvate formate lyase II activase 3980 55.93 0 4266324..4266677 + 117 62182576 frwD SC4006 - putative fructose-like phosphotransferase EIIB subunit 3 3981 56.22 0 4266664..4267515 - 283 62182577 yijO SC4007 - paral regulator 3982 52.60 0 4267676..4269409 - 577 62182578 yijP SC4008 - hypothetical protein 3983 57.05 0 4269620..4272271 - 883 62182579 ppc SC4009 - phosphoenolpyruvate carboxylase 3984 53.56 0 4272640..4273791 - 383 62182580 argE SC4010 - acetylornithine deacetylase 3985 53.63 0 4273880..4274884 + 334 62182581 argC SC4011 - N-acetyl-gamma-glutamyl-phosphate reductase 3986 57.88 +1 4274895..4275668 + 257 62182582 argB SC4012 - acetylglutamate kinase 3987 56.94 0 4275786..4277162 + 458 62182583 argH SC4013 - argininosuccinate lyase 3988 56.21 0 4277449..4278366 + 305 62182584 oxyR SC4014 - DNA-binding transcriptional regulator OxyR 3989 52.68 0 4278349..4279749 - 466 62182585 udhA SC4015 - soluble pyridine nucleotide transhydrogenase 3990 55.82 0 4279948..4280583 + 211 62182586 yijC SC4016 - DNA-binding transcriptional repressor FabR 3991 51.94 0 4280599..4280958 + 119 62182587 yijD SC4017 - hypothetical protein 3992 51.86 0 4281005..4282105 - 366 62182588 trmA SC4018 - tRNA (uracil-5-)-methyltransferase 3993 51.40 0 4282437..4284323 + 628 62182589 btuB SC4019 - vitamin B12/cobalamin outer membrane transporter 3994 54.58 0 4284268..4285119 + 283 62182590 murI SC4020 - glutamate racemase 3995 53.35 0 4290689..4291717 + 342 62182595 murB SC4025 - UDP-N-acetylenolpyruvoylglucosamine reductase 3996 49.33 0 4291714..4292676 + 320 62182596 birA SC4026 - biotin--protein ligase 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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