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Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 313 55.77 0 364165..364779 + 204 62178886 prfH SC0316 - peptide chain release factor-like protein 314 53.22 0 364935..366392 - 485 62178887 pepD SC0317 - aminoacyl-histidine dipeptidase (peptidase D) 315 53.16 0 366641..367099 + 152 62178888 gpt SC0318 - xanthine-guanine phosphoribosyltransferase 316 54.86 0 367188..368432 + 414 62178889 frsA SC0319 - fermentation/respiration switch protein 317 50.25 0 368490..368891 + 133 62178890 crl SC0320 - DNA-binding transcriptional regulator Crl 318 46.91 0 368942..369994 - 350 62178891 phoE SC0321 - outer membrane phosphoporin protein E 319 55.80 0 370276..371379 + 367 62178892 proB SC0322 - gamma-glutamyl kinase 320 56.27 0 371391..372641 + 416 62178893 proA SC0323 - gamma-glutamyl phosphate reductase 321 48.80 0 372847..374010 - 387 62178894 int SC0324 - hypothetical protein 322 43.71 -1 374240..374875 - 211 62178895 eac SC0325 - EaC protein 323 50.09 0 374946..376121 - 391 62178896 eaa SC0326 - Eaa protein 324 48.05 0 376118..376579 - 153 62178897 - SC0327 - hypothetical protein 325 49.23 0 376576..377097 - 173 62178898 - SC0328 - hypothetical protein 326 47.86 0 377094..377327 - 77 62178899 - SC0329 - hypothetical protein 327 47.35 0 377324..377701 - 125 62178900 eae SC0330 - Eae protein 328 46.63 0 378809..379357 - 182 62178901 exoD SC0331 - endodeoxyribonuclease 329 50.30 0 379366..379872 - 168 62178902 ssb SC0332 - ssDNA-binding protein controls activity of RecBCD nuclease 330 47.74 0 379873..380580 - 235 62178903 - SC0333 - hypothetical protein 331 46.56 0 380710..380898 - 62 62178904 kil SC0334 - host septation inhibitor 332 47.70 0 380879..381052 - 57 62178905 rpc SC0335 - C3-like protein 333 38.81 -2 381244..381444 - 66 62178906 - SC0336 - hypothetical protein 334 50.78 0 381513..381770 - 85 62178907 - SC0337 - 43L-like protein 335 49.50 0 382199..382501 - 100 62178908 regN SC0338 - antitermination protein 336 46.30 0 383603..383818 + 71 62178909 cro SC0339 - regulatory protein Cro (antirepressor) 337 45.94 -1 384386..385234 + 282 62178910 rpo SC0340 - replication protein O 338 50.98 0 385342..387222 + 626 62178911 - SC0341 - hypothetical protein 339 46.28 -1 388012..388884 + 290 62178912 nin SC0342 - phosphoadenosine phosphosulfate reductase family protein 340 49.40 0 388943..389278 - 111 62178913 stx SC0343 - hypothetical protein 341 51.52 0 389632..390027 + 131 62178914 rusA SC0344 - endodeoxyribonuclease RUS 342 53.89 0 390208..390387 + 59 62178915 ninZ SC0345 - NinZ 343 44.12 -1 390384..390902 + 172 62178916 - SC0346 - gp23-like protein 344 48.46 0 391363..391686 + 107 62178917 - SC0347 - holin-like protein 345 44.72 -1 391561..391683 - 40 62178918 - SC0348 - hypothetical protein 346 51.15 0 391670..392146 + 158 62178919 lycV SC0349 - lysin 347 50.68 0 392143..392580 + 145 62178920 enpP SC0350 - Rz lysis protein 348 42.94 -1 392786..393274 + 162 62178922 - SC0352 - hypothetical protein 349 45.68 -1 393765..394007 + 80 62178923 - SC0353 - hypothetical protein 350 50.47 0 394509..396008 + 499 62178924 - SC0354 - gp2-like protein 351 50.92 0 396009..398174 + 721 62178925 - SC0355 - putative packaging glycoprotein 352 52.85 0 398188..399099 + 303 62178926 - SC0356 - scaffolding protein 353 50.69 0 399099..400394 + 431 62178927 - SC0357 - coat protein 354 49.30 0 400653..401153 + 166 62178928 - SC0358 - DNA stabilization protein 355 50.81 0 401154..402572 + 472 62178929 - SC0359 - DNA stabilization protein 356 43.19 -1 402576..403214 + 212 62178930 - SC0360 - packaged DNA stabilization protein gp26 357 49.56 0 403214..403669 + 151 62178931 - SC0361 - hypothetical protein 358 53.19 0 403672..404361 + 229 62178932 - SC0362 - DNA transfer protein gp7 precursor 359 51.44 0 404404..405723 + 439 62178933 - SC0363 - DNA transfer protein gp20 360 51.25 0 405723..407636 + 637 62178934 - SC0364 - TPA: injection protein 361 34.55 -2 407654..407983 - 109 62178936 - SC0366 - hypothetical protein 362 43.33 -1 408223..409983 + 586 62178937 - SC0367 - hypothetical protein 363 38.97 -2 410259..411713 - 484 62178938 - SC0368 - hypothetical protein 364 46.49 0 411703..412629 - 308 62178939 gtrB SC0369 - bactoprenol glucosyl transferase 365 41.19 -1 412629..412997 - 122 62178940 gtrA SC0370 - bactoprenol-linked glucose translocase 366 54.40 0 413672..414535 - 287 62178941 insF SC0371 - putative IS3 transposase 367 46.30 0 415277..415600 + 107 62178942 yoaC SC0372 - putative cytoplasmic protein 368 42.68 -1 415842..417179 + 445 62178943 ynfM SC0373 - putative permease 369 51.27 0 417311..418732 + 473 62178944 ledL SC0374 - isopropylmalate isomerase large subunit 370 51.83 0 418734..419360 + 208 62178945 ledS SC0375 - putative 3-isopropylmalate isomerase (dehydratase), subunit with LeuC 371 49.94 0 419375..420253 + 292 62178946 faaH SC0376 - putative fumarylacetoacetate (FAA) hydrolase 372 51.58 0 420253..421167 + 304 62178947 deh SC0377 - putative hydrolase or acyltransferase 373 48.96 0 421201..422166 + 321 62178948 ygiP SC0378 - LysR family transcriptional regulator 374 35.59 -2 423074..423472 + 132 62178949 - SC0379 - putative outer membrane protein 375 52.04 0 424244..425569 - 441 62178950 stbD SC0380 - putative fimbriae; usher 376 54.06 0 425574..428135 - 853 62178951 stbC SC0381 - putative fimbriae; usher 377 45.41 -1 428119..428880 - 253 62178952 stbB SC0382 - putative fimbriae; chaparone 378 47.49 0 428942..429478 - 178 62178953 stbA SC0383 - putative fimbriae; major subunit 379 36.08 -2 430112..430876 + 254 62178954 - SC0384 - putative inner membrane protein 380 37.92 -2 430849..431349 + 166 62178955 - SC0385 - putative periplasmic protein 381 48.51 0 431649..433223 + 524 62178956 rtn SC0386 - diguanylate cyclase/phosphodiesterase domain-containing protein 382 40.19 -2 433323..434066 + 247 62178957 - SC0387 - putative response regulator 383 39.47 -2 434039..434527 + 162 62178958 - SC0388 - putative inner membrane protein 384 40.76 -1 434928..435452 + 174 62178959 ail SC0389 - hypothetical protein 385 40.03 -2 435596..436237 + 213 62178960 - SC0390 - putative response regulator 386 35.56 -2 436248..436472 + 74 62178961 - SC0391 - putative inner membrane protein 387 48.89 0 436530..436889 + 119 62178962 yjeI SC0392 - putative outer membrane lipoprotein 388 59.53 +1 436959..438416 - 485 62178963 oprM SC0393 - outer membrane efflux protein-like protein 389 60.47 +1 441597..442823 - 408 62178964 mtrC SC0394 - putative cation efflux pump 390 54.41 0 445402..445866 + 154 62178965 hmrR SC0395 - putative transcriptional regulator 391 57.95 +1 445944..446138 + 64 62178966 hmb SC0396 - putative copper chaperone 392 54.23 0 446430..447683 + 417 62178967 jen SC0397 - putative inner membrane protein 393 46.61 0 447872..449830 + 652 62178968 mod SC0398 - DNA methylase; restriction system 394 49.01 0 449840..452812 + 990 62178969 res SC0399 - DNA restriction (DNA helicase 395 50.00 0 453090..453191 + 33 62178970 - SC0400 - putative cytoplasmic protein 396 55.34 0 453308..454711 + 467 62178971 cydA SC0401 - cytochrome BD2 subunit I 397 55.29 0 454708..455718 + 336 62178972 cydB SC0402 - cytochrome BD2 subunit II 398 56.89 0 455735..455959 + 74 62178973 - SC0403 - putative inner membrane protein 399 57.91 +1 456055..457059 + 334 62178974 - SC0404 - AraC family transcriptional regulator 400 52.82 0 457205..459313 + 702 62178975 foxA SC0405 - ferrioxamine receptor 401 53.55 0 459354..459986 - 210 62178976 yahN SC0406 - paral putative transport protein 402 44.20 -1 460218..460493 + 91 62178977 yahO SC0407 - hypothetical protein 403 55.54 0 460629..462254 - 541 62178978 prpR SC0408 - prp operon regulator 404 58.45 +1 462520..463407 + 295 62178979 prpB SC0409 - 2-methylisocitrate lyase 405 55.38 0 463530..464699 + 389 62178980 prpC SC0410 - methylcitrate synthase 406 56.89 0 464737..466188 + 483 62178981 prpD SC0411 - 2-methylcitrate dehydratase 407 58.93 +1 466229..468115 + 628 62178982 prpE SC0412 - propionyl-CoA synthetase 408 55.38 0 468222..469196 - 324 62178983 hemB SC0413 - delta-aminolevulinic acid dehydratase 409 45.29 -1 469709..472594 + 961 62178984 yaiU SC0414 - flagellar protein 410 43.11 -1 472680..473303 + 207 62178985 yaiV SC0415 - putative DNA-binding transcriptional regulator 411 52.68 0 473348..474505 - 385 62178986 ampH SC0416 - beta-lactamase/D-alanine carboxypeptidase 412 52.25 0 474852..476072 + 406 62178987 sbmA SC0417 - transport protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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