version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3480 47.78 0 3695047..3695316 + 89 62182072 yhhL SC3502 - hypothetical protein 3481 52.69 0 3695338..3695709 - 123 62182073 yhhM SC3503 - hypothetical protein 3482 57.89 +1 3695851..3696477 + 208 62182074 yhhN SC3504 - hypothetical protein 3483 60.39 +1 3696558..3698756 + 732 62182075 zntA SC3505 - zinc/cadmium/mercury/lead-transporting ATPase 3484 55.66 0 3698956..3700599 + 547 62182076 tcp SC3506 - methyl-accepting transmembrane citrate/phenol chemoreceptor 3485 54.07 0 3700623..3700868 - 81 162139531 yhhP SC3507 - cell developmental protein SirA 3486 50.75 0 3701038..3701703 + 221 62182078 yhhQ SC3508 - hypothetical protein 3487 53.41 0 3701776..3702333 + 185 62182079 dcrB SC3509 - hypothetical protein 3488 59.11 +1 3702337..3703554 - 405 162139530 yhhS SC3510 - hypothetical protein 3489 51.71 0 3703686..3704735 + 349 62182081 yhhT SC3511 - PerM family permease 3490 58.55 +1 3704787..3705365 + 192 62182082 acpT SC3512 - holo-(acyl carrier protein) synthase 2 3491 54.57 0 3705421..3705858 + 145 62182083 nikR SC3513 - nickel responsive regulator 3492 54.49 0 3705961..3707085 - 374 62182084 yhhJ SC3514 - ABC transporter ATP-binding protein 3493 57.73 +1 3707085..3709826 - 913 62182085 yhiH SC3515 - mtultidrug ABC transporter permease/ATPase 3494 61.31 +1 3709883..3710815 - 310 62182086 yhiI SC3516 - paral putative membrane protein 3495 56.31 0 3711196..3712392 - 398 62182087 yhiN SC3517 - hypothetical protein 3496 53.84 0 3712623..3714119 + 498 62182088 pitA SC3518 - PiT family, low-affinity phosphate transporter 3497 50.00 0 3714260..3714595 - 111 62182089 uspB SC3519 - universal stress protein UspB 3498 51.26 0 3714983..3715417 + 144 62182090 uspA SC3520 - universal stress protein A 3499 50.85 0 3715742..3717214 + 490 62182091 yhiP SC3521 - inner membrane transporter YhiP 3500 62.06 +1 3717306..3718064 - 252 62182092 yhiQ SC3522 - putative methyltransferase 3501 56.05 0 3718071..3720113 - 680 62182093 opdA SC3523 - oligopeptidase A 3502 55.03 0 3720295..3721566 - 423 62182094 - SC3524 - putative phosphatase 3503 56.35 0 3721777..3722619 + 280 62182095 yhiR SC3525 - hypothetical protein 3504 54.69 0 3722724..3724076 + 450 62182096 gor SC3526 - glutathione reductase 3505 45.97 -1 3724176..3725291 - 371 62182097 csbX SC3527 - Alpha-ketoglutarate permease 3506 38.79 -2 3725264..3725428 - 54 62182098 - SC3528 - alpha-ketoglutarate permease 3507 36.27 -2 3725471..3726424 - 317 62182099 - SC3529 - hypothetical protein 3508 37.87 -2 3726653..3727534 + 293 62182100 rpiR SC3530 - protein rpiR 3509 41.51 -1 3727648..3728466 + 272 62182101 rbsK SC3531 - ribokinase 3510 51.05 0 3728555..3729598 - 347 62182102 aspG SC3532 - putative L-asparaginase 3511 50.91 0 3729657..3730976 - 439 62182103 dcuB SC3533 - anaerobic C4-dicarboxylate transporter 3512 47.28 0 3731030..3731875 - 281 62182104 yurL SC3534 - ribokinase family sugar kinase 3513 50.36 0 3731939..3732913 - 324 62182105 psi SC3535 - putative phosphosugar isomerase 3514 48.89 0 3733092..3733811 - 239 62182106 yurK SC3536 - GntR family transcriptional regulator 3515 55.33 0 3734137..3735786 + 549 62182107 treF SC3537 - trehalase 3516 56.42 0 3735799..3737388 - 529 62182108 - SC3538 - hypothetical protein 3517 48.74 0 3737669..3738025 + 118 62182109 - SC3539 - putative phage endolysin 3518 49.28 0 3738031..3738588 - 185 62182110 yhjB SC3540 - putative transcriptional regulator (LuxR/UhpA familiy) 3519 44.83 -1 3738634..3739842 - 402 62182111 TnpR SC3541 - transposase of Tn10 3520 51.12 0 3741574..3742602 + 342 62182112 yhjD SC3542 - hypothetical protein 3521 58.58 +1 3742953..3744275 + 440 62182113 yhjE SC3543 - MFS family transporter 3522 54.54 0 3744315..3746375 - 686 62182114 yhjG SC3544 - hypothetical protein 3523 53.39 0 3746485..3747252 - 255 62182115 yhjH SC3545 - EAL domain-containing protein 3524 55.91 0 3747481..3748410 + 309 62182116 kdgK SC3546 - ketodeoxygluconokinase 3525 53.83 0 3748464..3749951 - 495 62182117 yhjJ SC3547 - putative Zn-dependent peptidase 3526 53.22 0 3750171..3751457 - 428 62182118 dctA SC3548 - C4-dicarboxylate transporter DctA 3527 54.26 0 3751615..3753588 - 657 62182119 yhjK SC3549 - putative phosphodiesterase 3528 60.26 +1 3753795..3757337 - 1180 62182120 yhjL SC3550 - cellulose synthase subunit BcsC 3529 55.89 0 3757319..3757615 - 98 62182121 - SC3551 - endo-1,4-D-glucanase 3530 56.83 0 3757646..3758905 + 419 62182122 yhjU SC3552 - hypothetical protein 3531 55.30 0 3758987..3759118 - 43 62182123 - SC3553 - hypothetical protein 3532 55.77 0 3759222..3759377 + 51 62182124 - SC3554 - hypothetical protein 3533 48.23 0 3759468..3759608 + 46 62182125 - SC3555 - cystathionine gamma-synthase 3534 43.97 -1 3759690..3761024 + 444 62182126 yhjV SC3556 - HAAAP family transport protein 3535 57.30 0 3761125..3762138 - 337 62182127 dppF SC3557 - dipeptide transporter ATP-binding subunit 3536 55.69 0 3762135..3763118 - 327 62182128 dppD SC3558 - dipeptide transporter ATP-binding subunit 3537 60.02 +1 3763129..3764031 - 300 62182129 dppC SC3559 - dipeptide transporter 3538 56.37 0 3764041..3765060 - 339 62182130 dppB SC3560 - dipeptide transporter permease DppB 3539 52.05 0 3765217..3766824 - 535 62182131 dppA SC3561 - peptide ABC transporter permease 3540 54.83 0 3767380..3768705 - 441 62182132 pucJ SC3562 - putative xanthine permease 3541 57.42 0 3768763..3769887 - 374 62182133 - SC3563 - PQQ repeat-containing protein 3542 41.78 -1 3769875..3770087 - 70 62182134 - SC3564 - hypothetical protein 3543 40.12 -2 3769909..3770070 + 53 62182135 - SC3565 - hypothetical protein 3544 59.62 +1 3770037..3771044 + 335 62182136 celR SC3566 - LacI family regulatory protein 3545 51.71 0 3771357..3773048 - 563 162139529 yhjW SC3567 - phosphoethanolamine transferase 3546 51.14 0 3773266..3773793 - 175 62182138 lpfE SC3568 - long polar fimbrial minor protein 3547 46.76 0 3773799..3774878 - 359 62182139 lpfD SC3569 - long polar fimbrial operon protein 3548 44.92 -1 3777447..3778145 - 232 62182140 lpfB SC3570 - long polar fimbrial chaperone 3549 46.37 0 3778230..3778766 - 178 62182141 lpfA SC3571 - long polar fimbria 3550 55.24 0 3779114..3779218 - 34 62182142 yhjX SC3572 - hypothetical protein 3551 54.47 0 3779272..3779976 - 234 62182143 yhjY SC3573 - hypothetical protein 3552 52.23 0 3780133..3780714 + 193 62182144 tag SC3574 - 3-methyl-adenine DNA glycosylase I 3553 51.47 0 3780692..3781132 + 146 62182145 yiaC SC3575 - hypothetical protein 3554 57.75 +1 3781101..3783434 - 777 62182146 - SC3576 - biotin sulfoxide reductase 3555 58.97 +1 3783587..3784249 + 220 62182147 yiaD SC3577 - putative outer membrane lipoprotein 3556 56.72 0 3784468..3785442 + 324 62182148 yiaE SC3578 - 2-hydroxyacid dehydrogenase 3557 55.41 0 3785492..3786202 - 236 62182149 yiaF SC3579 - hypothetical protein 3558 46.39 0 3786641..3786931 + 96 62182150 yiaG SC3580 - putative transcriptional regulator 3559 47.42 0 3787219..3787431 + 70 62182151 cspA SC3581 - major cold shock protein 3560 49.63 0 3787605..3788144 + 179 62182152 - SC3582 - hypothetical protein 3561 50.50 0 3788396..3788797 + 133 62182153 - SC3583 - putative cytoplasmic protein 3562 50.15 0 3788968..3789651 + 227 62182154 yis2 SC3584 - putative integrase protein 3563 49.18 0 3789830..3790315 - 161 62182155 - SC3585 - putative acetyltransferase 3564 47.22 0 3790303..3790590 - 95 62182156 - SC3586 - putative cytoplasmic protein 3565 41.24 -1 3790768..3791235 - 155 62182157 yafP SC3587 - putative acetyltransferase 3566 37.50 -2 3791407..3791598 - 63 62182158 insK SC3588 - putative transposase insK for insertion sequence e 3567 44.83 -1 3792031..3793239 - 402 62182159 tnp SC3589 - transposase of Tn10 3568 57.15 0 3793408..3795477 - 689 62182160 glyS SC3590 - glycyl-tRNA synthetase subunit beta 3569 55.70 0 3795487..3796398 - 303 62182161 glyQ SC3591 - glycyl-tRNA synthetase subunit alpha 3570 48.18 0 3796537..3796839 - 100 62182162 - SC3592 - putative outer membrane lipoprotein 3571 48.09 0 3797005..3798000 + 331 62182163 yiaH SC3593 - putative inner membrane protein 3572 51.13 0 3798023..3798376 - 117 62182164 yiaB SC3594 - hypothetical protein 3573 57.66 0 3798551..3800005 - 484 62182165 xylB SC3595 - xylulokinase 3574 53.82 0 3800105..3801427 - 440 62182166 xylA SC3596 - xylose isomerase 3575 52.67 0 3801790..3802968 + 392 62182167 xylR SC3597 - xylose operon regulatory protein 3576 52.36 0 3803029..3803853 - 274 62182168 bax SC3598 - hypothetical protein 3577 58.51 +1 3804169..3804891 + 240 62182169 malS SC3599 - alpha-amylase 3578 63.51 +2 3804768..3804989 + 73 62182170 lyxK SC3600 - L-xylulose kinase, cryptic 3579 60.78 +1 3804986..3805648 + 220 62182171 sgbH SC3601 - 3-keto-L-gulonate-6-phosphate decarboxylase 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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