version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3446 55.46 0 3659399..3661585 - 728 62182038 glgB SC3468 - glycogen branching enzyme 3447 56.64 0 3661932..3663038 - 368 62182039 asd SC3469 - aspartate-semialdehyde dehydrogenase 3448 46.53 0 3663089..3663232 + 47 62182040 - SC3470 - hypothetical protein 3449 57.57 0 3663462..3664802 - 446 62182041 gntU SC3471 - low affinity gluconate transporter 3450 53.00 0 3664799..3665332 - 177 162139532 gntK SC3472 - gluconate kinase 1 3451 56.40 0 3665471..3666532 - 353 62182043 gntR SC3473 - transcriptional repressor gnt-I, gntUKR (GalR/LacI familiy) 3452 55.32 0 3666596..3667291 - 231 62182044 yhhW SC3474 - hypothetical protein 3453 50.19 0 3667415..3668452 - 345 62182045 yhhX SC3475 - putative dehydrogenase 3454 54.60 0 3668920..3669408 + 162 62182046 yhhY SC3476 - putative acetyltransferase YhhY 3455 41.65 -1 3669672..3670886 + 404 62182047 rbsK SC3477 - putative transcriptional regulator of sugar metabolism 3456 42.91 -1 3670902..3671663 + 253 62182048 - SC3478 - putative cytoplasmic protein 3457 51.75 0 3671717..3672688 + 323 62182049 - SC3479 - putative inner membrane protein 3458 55.94 0 3673764..3675506 - 580 62182050 ggt SC3480 - gamma-glutamyltranspeptidase periplasmic precursor 3459 53.96 0 3675632..3676048 + 138 62182051 yhhA SC3481 - hypothetical protein 3460 58.70 +1 3676061..3676801 - 246 62182052 ugpQ SC3482 - cytoplasmic glycerophosphodiester phosphodiesterase 3461 58.45 +1 3676798..3677868 - 356 62182053 ugpC SC3483 - glycerol-3-phosphate transporter ATP-binding subunit 3462 53.19 0 3677871..3678716 - 281 62182054 ugpE SC3484 - glycerol-3-phosphate transporter membrane protein 3463 55.86 0 3678713..3679600 - 295 62182055 ugpA SC3485 - glycerol-3-phosphate transporter permease 3464 52.62 0 3679705..3681021 - 438 62182056 ugpB SC3486 - glycerol-3-phosphate transporter periplasmic binding protein 3465 51.76 0 3681280..3681648 - 122 62182057 doc SC3487 - hypothetical protein 3466 55.86 0 3681645..3681866 - 73 62182058 yhhV SC3488 - putative cytoplasmic protein 3467 59.94 +1 3681997..3682710 - 237 62182059 livF SC3489 - leucine/isoleucine/valine transporter ATP-binding subunit 3468 57.29 0 3682712..3683479 - 255 62182060 livG SC3490 - leucine/isoleucine/valine transporter ATP-binding subunit 3469 57.75 +1 3683476..3684753 - 425 62182061 livM SC3491 - leucine/isoleucine/valine transporter permease subunit 3470 55.88 0 3684750..3685676 - 308 62182062 livH SC3492 - branched-chain amino acid transporter permease subunit LivH 3471 55.47 0 3687267..3687650 + 127 62182063 yhhK SC3493 - hypothetical protein 3472 49.90 0 3687647..3688165 - 172 62182064 - SC3494 - hypothetical protein 3473 49.63 0 3688169..3688438 - 89 62182065 - SC3495 - hypothetical protein 3474 54.87 0 3688616..3689776 - 386 62182066 livJ SC3496 - Leu/Ile/Val/Thr-binding protein precursor 3475 54.15 0 3690041..3690895 - 284 62182067 rpoH SC3497 - RNA polymerase factor sigma-32 3476 57.77 +1 3691141..3692196 - 351 62182068 ftsX SC3498 - cell division protein FtsX 3477 56.62 0 3692189..3692785 - 198 62182069 ftsE SC3499 - cell division protein FtsE 3478 55.28 0 3692860..3694335 - 491 62182070 ftsY SC3500 - cell division protein FtsY 3479 56.62 0 3694461..3695057 + 198 62182071 yhhF SC3501 - 16S rRNA m(2)G966-methyltransferase 3480 47.78 0 3695047..3695316 + 89 62182072 yhhL SC3502 - hypothetical protein 3481 52.69 0 3695338..3695709 - 123 62182073 yhhM SC3503 - hypothetical protein 3482 57.89 +1 3695851..3696477 + 208 62182074 yhhN SC3504 - hypothetical protein 3483 60.39 +1 3696558..3698756 + 732 62182075 zntA SC3505 - zinc/cadmium/mercury/lead-transporting ATPase 3484 55.66 0 3698956..3700599 + 547 62182076 tcp SC3506 - methyl-accepting transmembrane citrate/phenol chemoreceptor 3485 54.07 0 3700623..3700868 - 81 162139531 yhhP SC3507 - cell developmental protein SirA 3486 50.75 0 3701038..3701703 + 221 62182078 yhhQ SC3508 - hypothetical protein 3487 53.41 0 3701776..3702333 + 185 62182079 dcrB SC3509 - hypothetical protein 3488 59.11 +1 3702337..3703554 - 405 162139530 yhhS SC3510 - hypothetical protein 3489 51.71 0 3703686..3704735 + 349 62182081 yhhT SC3511 - PerM family permease 3490 58.55 +1 3704787..3705365 + 192 62182082 acpT SC3512 - holo-(acyl carrier protein) synthase 2 3491 54.57 0 3705421..3705858 + 145 62182083 nikR SC3513 - nickel responsive regulator 3492 54.49 0 3705961..3707085 - 374 62182084 yhhJ SC3514 - ABC transporter ATP-binding protein 3493 57.73 +1 3707085..3709826 - 913 62182085 yhiH SC3515 - mtultidrug ABC transporter permease/ATPase 3494 61.31 +1 3709883..3710815 - 310 62182086 yhiI SC3516 - paral putative membrane protein 3495 56.31 0 3711196..3712392 - 398 62182087 yhiN SC3517 - hypothetical protein 3496 53.84 0 3712623..3714119 + 498 62182088 pitA SC3518 - PiT family, low-affinity phosphate transporter 3497 50.00 0 3714260..3714595 - 111 62182089 uspB SC3519 - universal stress protein UspB 3498 51.26 0 3714983..3715417 + 144 62182090 uspA SC3520 - universal stress protein A 3499 50.85 0 3715742..3717214 + 490 62182091 yhiP SC3521 - inner membrane transporter YhiP 3500 62.06 +1 3717306..3718064 - 252 62182092 yhiQ SC3522 - putative methyltransferase 3501 56.05 0 3718071..3720113 - 680 62182093 opdA SC3523 - oligopeptidase A 3502 55.03 0 3720295..3721566 - 423 62182094 - SC3524 - putative phosphatase 3503 56.35 0 3721777..3722619 + 280 62182095 yhiR SC3525 - hypothetical protein 3504 54.69 0 3722724..3724076 + 450 62182096 gor SC3526 - glutathione reductase 3505 45.97 -1 3724176..3725291 - 371 62182097 csbX SC3527 - Alpha-ketoglutarate permease 3506 38.79 -2 3725264..3725428 - 54 62182098 - SC3528 - alpha-ketoglutarate permease 3507 36.27 -2 3725471..3726424 - 317 62182099 - SC3529 - hypothetical protein 3508 37.87 -2 3726653..3727534 + 293 62182100 rpiR SC3530 - protein rpiR 3509 41.51 -1 3727648..3728466 + 272 62182101 rbsK SC3531 - ribokinase 3510 51.05 0 3728555..3729598 - 347 62182102 aspG SC3532 - putative L-asparaginase 3511 50.91 0 3729657..3730976 - 439 62182103 dcuB SC3533 - anaerobic C4-dicarboxylate transporter 3512 47.28 0 3731030..3731875 - 281 62182104 yurL SC3534 - ribokinase family sugar kinase 3513 50.36 0 3731939..3732913 - 324 62182105 psi SC3535 - putative phosphosugar isomerase 3514 48.89 0 3733092..3733811 - 239 62182106 yurK SC3536 - GntR family transcriptional regulator 3515 55.33 0 3734137..3735786 + 549 62182107 treF SC3537 - trehalase 3516 56.42 0 3735799..3737388 - 529 62182108 - SC3538 - hypothetical protein 3517 48.74 0 3737669..3738025 + 118 62182109 - SC3539 - putative phage endolysin 3518 49.28 0 3738031..3738588 - 185 62182110 yhjB SC3540 - putative transcriptional regulator (LuxR/UhpA familiy) 3519 44.83 -1 3738634..3739842 - 402 62182111 TnpR SC3541 - transposase of Tn10 3520 51.12 0 3741574..3742602 + 342 62182112 yhjD SC3542 - hypothetical protein 3521 58.58 +1 3742953..3744275 + 440 62182113 yhjE SC3543 - MFS family transporter 3522 54.54 0 3744315..3746375 - 686 62182114 yhjG SC3544 - hypothetical protein 3523 53.39 0 3746485..3747252 - 255 62182115 yhjH SC3545 - EAL domain-containing protein 3524 55.91 0 3747481..3748410 + 309 62182116 kdgK SC3546 - ketodeoxygluconokinase 3525 53.83 0 3748464..3749951 - 495 62182117 yhjJ SC3547 - putative Zn-dependent peptidase 3526 53.22 0 3750171..3751457 - 428 62182118 dctA SC3548 - C4-dicarboxylate transporter DctA 3527 54.26 0 3751615..3753588 - 657 62182119 yhjK SC3549 - putative phosphodiesterase 3528 60.26 +1 3753795..3757337 - 1180 62182120 yhjL SC3550 - cellulose synthase subunit BcsC 3529 55.89 0 3757319..3757615 - 98 62182121 - SC3551 - endo-1,4-D-glucanase 3530 56.83 0 3757646..3758905 + 419 62182122 yhjU SC3552 - hypothetical protein 3531 55.30 0 3758987..3759118 - 43 62182123 - SC3553 - hypothetical protein 3532 55.77 0 3759222..3759377 + 51 62182124 - SC3554 - hypothetical protein 3533 48.23 0 3759468..3759608 + 46 62182125 - SC3555 - cystathionine gamma-synthase 3534 43.97 -1 3759690..3761024 + 444 62182126 yhjV SC3556 - HAAAP family transport protein 3535 57.30 0 3761125..3762138 - 337 62182127 dppF SC3557 - dipeptide transporter ATP-binding subunit 3536 55.69 0 3762135..3763118 - 327 62182128 dppD SC3558 - dipeptide transporter ATP-binding subunit 3537 60.02 +1 3763129..3764031 - 300 62182129 dppC SC3559 - dipeptide transporter 3538 56.37 0 3764041..3765060 - 339 62182130 dppB SC3560 - dipeptide transporter permease DppB 3539 52.05 0 3765217..3766824 - 535 62182131 dppA SC3561 - peptide ABC transporter permease 3540 54.83 0 3767380..3768705 - 441 62182132 pucJ SC3562 - putative xanthine permease 3541 57.42 0 3768763..3769887 - 374 62182133 - SC3563 - PQQ repeat-containing protein 3542 41.78 -1 3769875..3770087 - 70 62182134 - SC3564 - hypothetical protein 3543 40.12 -2 3769909..3770070 + 53 62182135 - SC3565 - hypothetical protein 3544 59.62 +1 3770037..3771044 + 335 62182136 celR SC3566 - LacI family regulatory protein 3545 51.71 0 3771357..3773048 - 563 162139529 yhjW SC3567 - phosphoethanolamine transferase 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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