version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3405 54.99 0 3603677..3605809 + 710 62181997 yrfF SC3427 - hypothetical protein 3406 53.81 0 3605874..3606542 + 222 62181998 yrfG SC3428 - putative hydrolase 3407 55.97 0 3606553..3606954 + 133 62181999 yrfH SC3429 - ribosome-associated heat shock protein Hsp15 3408 54.49 0 3606979..3607857 + 292 162139533 hslO SC3430 - Hsp33-like chaperonin 3409 55.09 0 3607968..3609677 - 569 62182001 yhgE SC3431 - hypothetical protein 3410 53.52 0 3610057..3611676 + 539 62182002 pckA SC3432 - phosphoenolpyruvate carboxykinase 3411 57.43 0 3611751..3613103 - 450 62182003 envZ SC3433 - osmolarity sensor protein 3412 55.78 0 3613100..3613834 - 244 62182004 ompR SC3434 - osmolarity response regulator 3413 51.48 0 3614045..3614518 + 157 62182005 greB SC3435 - transcription elongation factor GreB 3414 58.56 +1 3614617..3616947 + 776 62182006 yhgF SC3436 - paral putative RNase R 3415 50.88 0 3617401..3617628 + 75 62182007 feoA SC3437 - ferrous iron transport protein A 3416 56.45 0 3617647..3619965 + 772 62182008 feoB SC3438 - ferrous iron transport protein B 3417 56.96 0 3619978..3620214 + 78 62182009 yhgG SC3439 - hypothetical protein 3418 52.35 0 3620460..3621374 + 304 62182010 yfcI SC3440 - putative cytoplasmic protein 3419 57.07 0 3621410..3622180 - 256 62182011 bioH SC3441 - carboxylesterase BioH 3420 58.77 +1 3622218..3622901 + 227 62182012 yhgH SC3442 - gluconate periplasmic binding protein 3421 53.82 0 3622960..3623535 + 191 62182013 yhgI SC3443 - putative DNA uptake protein 3422 55.81 0 3623912..3625228 + 438 62182014 gntT SC3444 - GntP family, high-affinity gluconate permease in GNT I system 3423 58.15 +1 3625347..3627425 - 692 62182015 malQ SC3445 - 4-alpha-glucanotransferase 3424 55.35 0 3627435..3629828 - 797 62182016 malP SC3446 - maltodextrin phosphorylase 3425 55.47 0 3630422..3633127 + 901 62182017 malT SC3447 - transcriptional regulator MalT 3426 50.27 0 3633269..3633829 - 186 62182018 - SC3448 - hypothetical protein 3427 62.59 +1 3633826..3634782 - 318 62182019 rtcA SC3449 - RNA 3'-terminal-phosphate cyclase 3428 55.01 0 3634864..3636081 - 405 62182020 rtcB SC3450 - putative cytoplasmic protein 3429 60.17 +1 3636425..3637978 - 517 62182021 - SC3451 - putative ribonucleoprotein related-protein 3430 32.68 -2 3637971..3638123 - 50 62182022 - SC3452 - hypothetical protein 3431 59.85 +1 3638168..3639751 + 527 62182023 rtcR SC3453 - sigma N (sigma 54)-dependent regulator of rtcBA expression (EBP familiy) 3432 54.02 0 3639748..3640506 - 252 62182024 glpR SC3454 - DNA-binding transcriptional repressor GlpR 3433 54.51 0 3640600..3641430 - 276 62182025 glpG SC3455 - intramembrane serine protease GlpG 3434 54.43 0 3641506..3641832 - 108 62182026 glpE SC3456 - thiosulfate sulfurtransferase 3435 55.67 0 3642031..3643539 + 502 62182027 glpD SC3457 - glycerol-3-phosphate dehydrogenase 3436 49.63 0 3643586..3644131 - 181 62182028 - SC3458 - hypothetical protein 3437 50.90 0 3644141..3645694 - 517 62182029 - SC3459 - putative periplasmic phosphate-binding protein 3438 54.77 0 3645795..3646904 - 369 62182030 gldA SC3460 - glycerol dehydrogenase 3439 54.08 0 3647244..3648578 + 444 62182031 tub SC3461 - hypothetical protein 3440 47.57 0 3650334..3651239 + 301 62182032 yagE SC3462 - putative dihydrodipicolinate synthetase 3441 50.53 0 3651283..3652038 - 251 62182033 yfaX SC3463 - putative transcriptional regulator 3442 52.25 0 3652216..3654663 - 815 62182034 glgP SC3464 - glycogen phosphorylase 3443 56.90 0 3654683..3656116 - 477 62182035 glgA SC3465 - glycogen synthase 3444 53.09 0 3656116..3657411 - 431 62182036 glgC SC3466 - glucose-1-phosphate adenylyltransferase 3445 57.16 0 3657426..3659402 - 658 62182037 glgX SC3467 - glycogen debranching enzyme 3446 55.46 0 3659399..3661585 - 728 62182038 glgB SC3468 - glycogen branching enzyme 3447 56.64 0 3661932..3663038 - 368 62182039 asd SC3469 - aspartate-semialdehyde dehydrogenase 3448 46.53 0 3663089..3663232 + 47 62182040 - SC3470 - hypothetical protein 3449 57.57 0 3663462..3664802 - 446 62182041 gntU SC3471 - low affinity gluconate transporter 3450 53.00 0 3664799..3665332 - 177 162139532 gntK SC3472 - gluconate kinase 1 3451 56.40 0 3665471..3666532 - 353 62182043 gntR SC3473 - transcriptional repressor gnt-I, gntUKR (GalR/LacI familiy) 3452 55.32 0 3666596..3667291 - 231 62182044 yhhW SC3474 - hypothetical protein 3453 50.19 0 3667415..3668452 - 345 62182045 yhhX SC3475 - putative dehydrogenase 3454 54.60 0 3668920..3669408 + 162 62182046 yhhY SC3476 - putative acetyltransferase YhhY 3455 41.65 -1 3669672..3670886 + 404 62182047 rbsK SC3477 - putative transcriptional regulator of sugar metabolism 3456 42.91 -1 3670902..3671663 + 253 62182048 - SC3478 - putative cytoplasmic protein 3457 51.75 0 3671717..3672688 + 323 62182049 - SC3479 - putative inner membrane protein 3458 55.94 0 3673764..3675506 - 580 62182050 ggt SC3480 - gamma-glutamyltranspeptidase periplasmic precursor 3459 53.96 0 3675632..3676048 + 138 62182051 yhhA SC3481 - hypothetical protein 3460 58.70 +1 3676061..3676801 - 246 62182052 ugpQ SC3482 - cytoplasmic glycerophosphodiester phosphodiesterase 3461 58.45 +1 3676798..3677868 - 356 62182053 ugpC SC3483 - glycerol-3-phosphate transporter ATP-binding subunit 3462 53.19 0 3677871..3678716 - 281 62182054 ugpE SC3484 - glycerol-3-phosphate transporter membrane protein 3463 55.86 0 3678713..3679600 - 295 62182055 ugpA SC3485 - glycerol-3-phosphate transporter permease 3464 52.62 0 3679705..3681021 - 438 62182056 ugpB SC3486 - glycerol-3-phosphate transporter periplasmic binding protein 3465 51.76 0 3681280..3681648 - 122 62182057 doc SC3487 - hypothetical protein 3466 55.86 0 3681645..3681866 - 73 62182058 yhhV SC3488 - putative cytoplasmic protein 3467 59.94 +1 3681997..3682710 - 237 62182059 livF SC3489 - leucine/isoleucine/valine transporter ATP-binding subunit 3468 57.29 0 3682712..3683479 - 255 62182060 livG SC3490 - leucine/isoleucine/valine transporter ATP-binding subunit 3469 57.75 +1 3683476..3684753 - 425 62182061 livM SC3491 - leucine/isoleucine/valine transporter permease subunit 3470 55.88 0 3684750..3685676 - 308 62182062 livH SC3492 - branched-chain amino acid transporter permease subunit LivH 3471 55.47 0 3687267..3687650 + 127 62182063 yhhK SC3493 - hypothetical protein 3472 49.90 0 3687647..3688165 - 172 62182064 - SC3494 - hypothetical protein 3473 49.63 0 3688169..3688438 - 89 62182065 - SC3495 - hypothetical protein 3474 54.87 0 3688616..3689776 - 386 62182066 livJ SC3496 - Leu/Ile/Val/Thr-binding protein precursor 3475 54.15 0 3690041..3690895 - 284 62182067 rpoH SC3497 - RNA polymerase factor sigma-32 3476 57.77 +1 3691141..3692196 - 351 62182068 ftsX SC3498 - cell division protein FtsX 3477 56.62 0 3692189..3692785 - 198 62182069 ftsE SC3499 - cell division protein FtsE 3478 55.28 0 3692860..3694335 - 491 62182070 ftsY SC3500 - cell division protein FtsY 3479 56.62 0 3694461..3695057 + 198 62182071 yhhF SC3501 - 16S rRNA m(2)G966-methyltransferase 3480 47.78 0 3695047..3695316 + 89 62182072 yhhL SC3502 - hypothetical protein 3481 52.69 0 3695338..3695709 - 123 62182073 yhhM SC3503 - hypothetical protein 3482 57.89 +1 3695851..3696477 + 208 62182074 yhhN SC3504 - hypothetical protein 3483 60.39 +1 3696558..3698756 + 732 62182075 zntA SC3505 - zinc/cadmium/mercury/lead-transporting ATPase 3484 55.66 0 3698956..3700599 + 547 62182076 tcp SC3506 - methyl-accepting transmembrane citrate/phenol chemoreceptor 3485 54.07 0 3700623..3700868 - 81 162139531 yhhP SC3507 - cell developmental protein SirA 3486 50.75 0 3701038..3701703 + 221 62182078 yhhQ SC3508 - hypothetical protein 3487 53.41 0 3701776..3702333 + 185 62182079 dcrB SC3509 - hypothetical protein 3488 59.11 +1 3702337..3703554 - 405 162139530 yhhS SC3510 - hypothetical protein 3489 51.71 0 3703686..3704735 + 349 62182081 yhhT SC3511 - PerM family permease 3490 58.55 +1 3704787..3705365 + 192 62182082 acpT SC3512 - holo-(acyl carrier protein) synthase 2 3491 54.57 0 3705421..3705858 + 145 62182083 nikR SC3513 - nickel responsive regulator 3492 54.49 0 3705961..3707085 - 374 62182084 yhhJ SC3514 - ABC transporter ATP-binding protein 3493 57.73 +1 3707085..3709826 - 913 62182085 yhiH SC3515 - mtultidrug ABC transporter permease/ATPase 3494 61.31 +1 3709883..3710815 - 310 62182086 yhiI SC3516 - paral putative membrane protein 3495 56.31 0 3711196..3712392 - 398 62182087 yhiN SC3517 - hypothetical protein 3496 53.84 0 3712623..3714119 + 498 62182088 pitA SC3518 - PiT family, low-affinity phosphate transporter 3497 50.00 0 3714260..3714595 - 111 62182089 uspB SC3519 - universal stress protein UspB 3498 51.26 0 3714983..3715417 + 144 62182090 uspA SC3520 - universal stress protein A 3499 50.85 0 3715742..3717214 + 490 62182091 yhiP SC3521 - inner membrane transporter YhiP 3500 62.06 +1 3717306..3718064 - 252 62182092 yhiQ SC3522 - putative methyltransferase 3501 56.05 0 3718071..3720113 - 680 62182093 opdA SC3523 - oligopeptidase A 3502 55.03 0 3720295..3721566 - 423 62182094 - SC3524 - putative phosphatase 3503 56.35 0 3721777..3722619 + 280 62182095 yhiR SC3525 - hypothetical protein 3504 54.69 0 3722724..3724076 + 450 62182096 gor SC3526 - glutathione reductase 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0