version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3295 57.44 0 3501746..3502720 + 324 62181884 yhdH SC3314 - putative oxidoreductase 3296 51.44 0 3502832..3503836 + 334 62181885 yedY SC3315 - putative sulfite oxidase subunit YedY 3297 50.83 0 3503837..3504436 + 199 62181886 yedZ SC3316 - putative sulfite oxidase subunit YedZ 3298 52.65 0 3504829..3505299 + 156 62181887 accB SC3317 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3299 54.89 0 3505310..3506659 + 449 62181888 accC SC3318 - acetyl-CoA carboxylase biotin carboxylase subunit 3300 54.32 0 3506768..3507010 + 80 62181889 yhdT SC3319 - hypothetical protein 3301 55.03 0 3507000..3508451 + 483 62181890 panF SC3320 - sodium/panthothenate symporter 3302 55.90 0 3508463..3509344 + 293 62181891 prmA SC3321 - ribosomal protein L11 methyltransferase 3303 53.62 0 3510006..3510971 + 321 62181892 yhdG SC3322 - tRNA-dihydrouridine synthase B 3304 46.46 0 3510997..3511293 + 98 62181893 fis SC3323 - DNA-binding protein Fis 3305 45.12 -1 3511373..3512263 + 296 62181894 yhdJ SC3324 - putative methyltransferase 3306 42.19 -1 3512319..3512510 + 63 62181895 yhdU SC3325 - putative periplasmic protein 3307 43.44 -1 3514763..3515425 - 220 62181896 envR SC3326 - DNA-binding transcriptional regulator EnvR 3308 24.53 -2 3515498..3515656 + 52 62181897 - SC3327 - hypothetical protein 3309 50.90 0 3517007..3520120 + 1037 62181898 acrF SC3328 - multidrug transporter acriflavin resistance protein F 3310 40.00 -2 3520216..3520380 - 54 62181899 - SC3329 - hypothetical protein 3311 49.55 0 3520356..3520577 + 73 62181900 yhdV SC3330 - putative outer membrane lipoprotein 3312 47.97 0 3526627..3526749 + 40 62181904 - SC3334 - hypothetical protein 3313 50.81 0 3526924..3527478 + 184 62181905 yrdA SC3335 - putative ferripyochelin binding protein 3314 50.78 0 3527454..3527711 - 85 62181906 yrdB SC3336 - hypothetical protein 3315 50.31 0 3527708..3528526 - 272 62181907 aroE SC3337 - shikimate 5-dehydrogenase 3316 53.23 0 3528531..3529133 - 200 62181908 yrdC SC3338 - putative ribosome maturation factor 3317 52.85 0 3529108..3529650 - 180 62181909 yrdD SC3339 - hypothetical protein 3318 47.89 0 3529677..3530150 - 157 62181910 smg SC3340 - hypothetical protein 3319 53.96 0 3530122..3531246 - 374 62181911 smf SC3341 - hypothetical protein 3320 51.57 0 3531378..3531887 + 169 62181912 def SC3342 - peptide deformylase 3321 54.85 0 3531903..3532850 + 315 62181913 fmt SC3343 - methionyl-tRNA formyltransferase 3322 53.72 0 3532902..3534191 + 429 62181914 sun SC3344 - 16S rRNA methyltransferase B 3323 51.20 0 3534213..3535589 + 458 62181915 trkA SC3345 - potassium transporter peripheral membrane component 3324 44.93 -1 3535730..3536143 + 137 62181916 mscL SC3346 - large-conductance mechanosensitive channel 3325 48.12 0 3536406..3536831 - 141 62181917 zntR SC3347 - zinc-responsive transcriptional regulator 3326 49.59 0 3536842..3537210 - 122 62181918 yhdN SC3348 - hypothetical protein 3327 54.43 0 3537318..3537701 - 127 62181919 rplQ SC3349 - 50S ribosomal protein L17 3328 52.42 0 3537742..3538731 - 329 62181920 rpoA SC3350 - DNA-directed RNA polymerase subunit alpha 3329 51.37 0 3538757..3539377 - 206 62181921 rpsD SC3351 - 30S ribosomal protein S4 3330 51.54 0 3539411..3539800 - 129 62181922 rpsK SC3352 - 30S ribosomal protein S11 3331 47.86 0 3540322..3540438 - 38 62181923 rpmJ SC3353 - 50S ribosomal protein L36 3332 49.55 0 3540470..3541801 - 443 62181924 secY SC3354 - preprotein translocase subunit SecY 3333 54.48 0 3541809..3542243 - 144 62181925 rplO SC3355 - 50S ribosomal protein L15 3334 50.56 0 3542247..3542426 - 59 62181926 rpmD SC3356 - 50S ribosomal protein L30 3335 50.79 0 3542430..3542933 - 167 62181927 rpsE SC3357 - 30S ribosomal protein S5 3336 52.82 0 3542948..3543301 - 117 62181928 rplR SC3358 - 50S ribosomal protein L18 3337 51.50 0 3543311..3543844 - 177 62181929 rplF SC3359 - 50S ribosomal protein L6 3338 50.13 0 3543857..3544249 - 130 62181930 rpsH SC3360 - 30S ribosomal protein S8 3339 52.29 0 3544283..3544588 - 101 62181931 rpsN SC3361 - 30S ribosomal protein S14 3340 49.63 0 3544603..3545142 - 179 62181932 rplE SC3362 - 50S ribosomal protein L5 3341 46.03 -1 3545157..3545471 - 104 62181933 rplX SC3363 - 50S ribosomal protein L24 3342 50.00 0 3545482..3545853 - 123 62181934 rplN SC3364 - 50S ribosomal protein L14 3343 47.45 0 3546017..3546271 - 84 62181935 rpsQ SC3365 - 30S ribosomal protein S17 3344 53.12 0 3546271..3546462 - 63 62181936 rpmC SC3366 - 50S ribosomal protein L29 3345 52.31 0 3546462..3546872 - 136 62181937 rplP SC3367 - 50S ribosomal protein L16 3346 51.14 0 3546885..3547586 - 233 62181938 rpsC SC3368 - 30S ribosomal protein S3 3347 49.51 0 3547586..3547993 + 135 62181939 - SC3369 - hypothetical protein 3348 49.10 0 3547951..3548229 - 92 62181940 rpsS SC3370 - 30S ribosomal protein S19 3349 53.16 0 3548246..3549067 - 273 62181941 rplB SC3371 - 50S ribosomal protein L2 3350 48.84 0 3549085..3549387 - 100 62181942 rplW SC3372 - 50S ribosomal protein L23 3351 52.97 0 3549384..3549989 - 201 62181943 rplD SC3373 - 50S ribosomal protein L4 3352 51.43 0 3550000..3550629 - 209 62181944 rplC SC3374 - 50S ribosomal protein L3 3353 54.81 0 3550662..3550973 - 103 62181945 rpsJ SC3375 - 30S ribosomal protein S10 3354 52.19 0 3551227..3551820 + 197 62181946 hopD SC3376 - leader peptidase HopD 3355 42.77 -1 3551817..3552293 - 158 62181947 bfr SC3377 - bacterioferritin, iron storage and detoxification protein 3356 42.05 -1 3552366..3552560 - 64 62181948 bfd SC3378 - bacterioferritin-associated ferredoxin 3357 53.92 0 3552745..3553929 - 394 162139536 tuf SC3379 - elongation factor Tu 3358 51.77 0 3554001..3556115 - 704 62181950 fusA SC3380 - elongation factor G 3359 50.32 0 3556212..3556682 - 156 62181951 rpsG SC3381 - 30S ribosomal protein S7 3360 52.80 0 3556778..3557152 - 124 162139535 rpsL SC3382 - 30S ribosomal protein S12 3361 52.43 0 3557278..3557565 - 95 62181953 yheL SC3383 - tRNA 2-thiouridine synthesizing protein B 3362 53.78 0 3557573..3557929 - 118 62181954 yheM SC3384 - hypothetical protein 3363 58.40 +1 3557929..3558315 - 128 62181955 yheN SC3385 - hypothetical protein 3364 46.80 0 3558315..3559049 - 244 62181956 yheO SC3386 - hypothetical protein 3365 51.77 0 3559314..3560132 - 272 62181957 fkpA SC3387 - FKBP-type peptidyl-prolyl cis-trans isomerase 3366 51.14 0 3560352..3560570 + 72 62181958 slyX SC3388 - hypothetical protein 3367 55.33 0 3560765..3561355 - 196 62181959 slyD SC3389 - FKBP-type peptidyl-prolyl cis-trans isomerase 3368 48.76 0 3561450..3561650 - 66 62181960 yheV SC3390 - hypothetical protein 3369 54.71 0 3561660..3563465 - 601 62181961 kefB SC3391 - glutathione-regulated potassium-efflux system protein KefB 3370 55.07 0 3563465..3564016 - 183 62181962 yheR SC3392 - glutathione-regulated potassium-efflux system ancillary protein KefG 3371 57.76 +1 3564272..3566179 + 635 62181963 yheS SC3393 - putative ABC transporter ATP-binding protein 3372 53.60 0 3566342..3566563 + 73 62181964 mauR SC3394 - ABC transporter ATPase 3373 46.79 0 3566565..3566876 - 103 62181965 ydhR SC3395 - hypothetical protein 3374 54.97 0 3567064..3568140 + 358 62181966 yheT SC3396 - putative hydrolase 3375 50.23 0 3568137..3568355 + 72 62181967 yheU SC3397 - hypothetical protein 3376 54.94 0 3568407..3569276 + 289 62181968 prkB SC3398 - putative phosphoribulokinase 3377 53.33 0 3569372..3569776 - 134 62181969 yhfA SC3399 - hypothetical protein 3378 50.24 0 3570084..3570716 + 210 62181970 crp SC3400 - cAMP-regulatory protein 3379 54.57 0 3570753..3572852 + 699 62181971 yhfK SC3401 - putative inner membrane protein 3380 55.58 0 3572895..3574112 - 405 62181972 argD SC3402 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 3381 54.79 0 3574198..3574761 - 187 62181973 pabA SC3403 - para-aminobenzoate synthase component II 3382 55.39 0 3574793..3575395 - 200 62181974 fic SC3404 - cell filamentation protein Fic 3383 50.44 0 3575661..3576233 - 190 62181975 ppiA SC3405 - peptidyl-prolyl cis-trans isomerase A (rotamase A) 3384 54.74 0 3576510..3577691 + 393 62181976 yhfC SC3406 - hypothetical protein 3385 38.42 -2 3577824..3578000 - 58 62181977 - SC3407 - hypothetical protein 3386 56.72 0 3577953..3580496 + 847 62181978 nirB SC3408 - nitrite reductase, large subunit 3387 55.66 0 3580493..3580819 + 108 62181979 nirD SC3409 - nitrite reductase small subunit 3388 55.80 0 3581003..3581812 + 269 62181980 nirC SC3410 - nitrite transporter NirC 3389 57.93 +1 3581824..3583197 + 457 62181981 cysG SC3411 - siroheme synthase 3390 38.96 -2 3589344..3589592 + 82 62181982 yhfL SC3412 - putative outer membrane lipoprotein 3391 51.74 0 3589737..3590741 - 334 62181983 trpS SC3413 - tryptophanyl-tRNA synthetase 3392 55.73 0 3590734..3591492 - 252 62181984 gph SC3414 - phosphoglycolate phosphatase 3393 53.69 0 3591485..3592162 - 225 62181985 rpe SC3415 - ribulose-phosphate 3-epimerase 3394 49.10 0 3592180..3593016 - 278 62181986 dam SC3416 - DNA adenine methylase 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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