version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3261 51.80 0 3465294..3465932 - 212 62181850 sspA SC3280 - stringent starvation protein A 3262 47.47 0 3466000..3466947 - 315 62181851 - SC3281 - putative cytoplasmic protein 3263 53.18 0 3467147..3467539 - 130 62181852 rpsI SC3282 - 30S ribosomal protein S9 3264 51.28 0 3467555..3467983 - 142 162139537 rplM SC3283 - 50S ribosomal protein L13 3265 55.73 0 3468286..3469410 - 374 62181854 yhcM SC3284 - putative ATPase 3266 52.84 0 3469597..3470001 + 134 62181855 yhcB SC3285 - cytochrome d ubiquinol oxidase subunit III 3267 54.24 0 3470158..3471525 + 455 62181856 degQ SC3286 - serine endoprotease 3268 54.44 0 3471618..3472688 + 356 62181857 degS SC3287 - serine endoprotease 3269 54.37 0 3472722..3473453 - 243 62181858 - SC3288 - putative inner membrane protein 3270 63.82 +2 3473473..3474774 - 433 62181859 oadB SC3289 - putative oxalacetate decarboxylase, subunit beta 3271 64.02 +2 3474787..3476562 - 591 62181860 oadA SC3290 - pyruvate carboxylase subunit B 3272 59.26 +1 3476578..3476820 - 80 62181861 oadG SC3291 - oxaloacetate decarboxylase subunit gamma 3273 46.44 0 3476977..3477594 - 205 62181862 ttdB SC3292 - L(+)-tartrate dehydratase subunit beta 3274 51.89 0 3477594..3478493 - 299 62181863 ttdA SC3293 - tartrate dehydratase subunit alpha 3275 51.60 0 3478526..3479866 - 446 62181864 - SC3294 - putative cation transporter 3276 49.70 0 3480005..3480670 - 221 62181865 - SC3295 - GntR family transcriptional regulator 3277 48.89 0 3480657..3481286 - 209 62181866 - SC3296 - GntR family transcriptional regulator 3278 53.67 0 3481406..3482344 - 312 62181867 mdh SC3297 - malate dehydrogenase 3279 50.11 0 3482759..3483229 + 156 62181868 argR SC3298 - arginine repressor 3280 51.14 0 3483594..3483857 + 87 62181869 yhcN SC3299 - putative outer membrane protein 3281 49.81 0 3483961..3484227 + 88 62181870 - SC3300 - putative periplasmic protein 3282 44.69 -1 3484287..3484559 - 90 62181871 yhcO SC3301 - hypothetical protein 3283 52.69 0 3484731..3486698 - 655 62181872 yhcP SC3302 - p-hydroxybenzoic acid efflux subunit AaeB 3284 56.70 0 3486704..3487636 - 310 62181873 yhcQ SC3303 - p-hydroxybenzoic acid efflux subunit AaeA 3285 45.59 -1 3487644..3487847 - 67 62181874 yhcR SC3304 - hypothetical protein 3286 53.55 0 3488029..3488958 + 309 62181875 yhcS SC3305 - putative DNA-binding transcriptional regulator 3287 56.59 0 3489081..3490628 - 515 62181876 tldD SC3306 - protease TldD 3288 56.14 0 3490671..3494471 - 1266 62181877 yhdP SC3307 - hypothetical protein 3289 52.86 0 3494582..3496051 - 489 62181878 cafA SC3308 - ribonuclease G 3290 55.05 0 3496041..3496634 - 197 62181879 maf SC3309 - Maf-like protein 3291 53.25 0 3496643..3497134 - 163 62181880 mreD SC3310 - rod shape-determining protein MreD 3292 59.26 +1 3497134..3498186 - 350 62181881 mreC SC3311 - cell wall structural complex MreBCD transmembrane component MreC 3293 55.76 0 3498251..3499369 - 372 62181882 mreB SC3312 - rod shape-determining protein mreB 3294 53.58 0 3499602..3501542 - 646 62181883 yhdA SC3313 - regulatory protein CsrD 3295 57.44 0 3501746..3502720 + 324 62181884 yhdH SC3314 - putative oxidoreductase 3296 51.44 0 3502832..3503836 + 334 62181885 yedY SC3315 - putative sulfite oxidase subunit YedY 3297 50.83 0 3503837..3504436 + 199 62181886 yedZ SC3316 - putative sulfite oxidase subunit YedZ 3298 52.65 0 3504829..3505299 + 156 62181887 accB SC3317 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3299 54.89 0 3505310..3506659 + 449 62181888 accC SC3318 - acetyl-CoA carboxylase biotin carboxylase subunit 3300 54.32 0 3506768..3507010 + 80 62181889 yhdT SC3319 - hypothetical protein 3301 55.03 0 3507000..3508451 + 483 62181890 panF SC3320 - sodium/panthothenate symporter 3302 55.90 0 3508463..3509344 + 293 62181891 prmA SC3321 - ribosomal protein L11 methyltransferase 3303 53.62 0 3510006..3510971 + 321 62181892 yhdG SC3322 - tRNA-dihydrouridine synthase B 3304 46.46 0 3510997..3511293 + 98 62181893 fis SC3323 - DNA-binding protein Fis 3305 45.12 -1 3511373..3512263 + 296 62181894 yhdJ SC3324 - putative methyltransferase 3306 42.19 -1 3512319..3512510 + 63 62181895 yhdU SC3325 - putative periplasmic protein 3307 43.44 -1 3514763..3515425 - 220 62181896 envR SC3326 - DNA-binding transcriptional regulator EnvR 3308 24.53 -2 3515498..3515656 + 52 62181897 - SC3327 - hypothetical protein 3309 50.90 0 3517007..3520120 + 1037 62181898 acrF SC3328 - multidrug transporter acriflavin resistance protein F 3310 40.00 -2 3520216..3520380 - 54 62181899 - SC3329 - hypothetical protein 3311 49.55 0 3520356..3520577 + 73 62181900 yhdV SC3330 - putative outer membrane lipoprotein 3312 47.97 0 3526627..3526749 + 40 62181904 - SC3334 - hypothetical protein 3313 50.81 0 3526924..3527478 + 184 62181905 yrdA SC3335 - putative ferripyochelin binding protein 3314 50.78 0 3527454..3527711 - 85 62181906 yrdB SC3336 - hypothetical protein 3315 50.31 0 3527708..3528526 - 272 62181907 aroE SC3337 - shikimate 5-dehydrogenase 3316 53.23 0 3528531..3529133 - 200 62181908 yrdC SC3338 - putative ribosome maturation factor 3317 52.85 0 3529108..3529650 - 180 62181909 yrdD SC3339 - hypothetical protein 3318 47.89 0 3529677..3530150 - 157 62181910 smg SC3340 - hypothetical protein 3319 53.96 0 3530122..3531246 - 374 62181911 smf SC3341 - hypothetical protein 3320 51.57 0 3531378..3531887 + 169 62181912 def SC3342 - peptide deformylase 3321 54.85 0 3531903..3532850 + 315 62181913 fmt SC3343 - methionyl-tRNA formyltransferase 3322 53.72 0 3532902..3534191 + 429 62181914 sun SC3344 - 16S rRNA methyltransferase B 3323 51.20 0 3534213..3535589 + 458 62181915 trkA SC3345 - potassium transporter peripheral membrane component 3324 44.93 -1 3535730..3536143 + 137 62181916 mscL SC3346 - large-conductance mechanosensitive channel 3325 48.12 0 3536406..3536831 - 141 62181917 zntR SC3347 - zinc-responsive transcriptional regulator 3326 49.59 0 3536842..3537210 - 122 62181918 yhdN SC3348 - hypothetical protein 3327 54.43 0 3537318..3537701 - 127 62181919 rplQ SC3349 - 50S ribosomal protein L17 3328 52.42 0 3537742..3538731 - 329 62181920 rpoA SC3350 - DNA-directed RNA polymerase subunit alpha 3329 51.37 0 3538757..3539377 - 206 62181921 rpsD SC3351 - 30S ribosomal protein S4 3330 51.54 0 3539411..3539800 - 129 62181922 rpsK SC3352 - 30S ribosomal protein S11 3331 47.86 0 3540322..3540438 - 38 62181923 rpmJ SC3353 - 50S ribosomal protein L36 3332 49.55 0 3540470..3541801 - 443 62181924 secY SC3354 - preprotein translocase subunit SecY 3333 54.48 0 3541809..3542243 - 144 62181925 rplO SC3355 - 50S ribosomal protein L15 3334 50.56 0 3542247..3542426 - 59 62181926 rpmD SC3356 - 50S ribosomal protein L30 3335 50.79 0 3542430..3542933 - 167 62181927 rpsE SC3357 - 30S ribosomal protein S5 3336 52.82 0 3542948..3543301 - 117 62181928 rplR SC3358 - 50S ribosomal protein L18 3337 51.50 0 3543311..3543844 - 177 62181929 rplF SC3359 - 50S ribosomal protein L6 3338 50.13 0 3543857..3544249 - 130 62181930 rpsH SC3360 - 30S ribosomal protein S8 3339 52.29 0 3544283..3544588 - 101 62181931 rpsN SC3361 - 30S ribosomal protein S14 3340 49.63 0 3544603..3545142 - 179 62181932 rplE SC3362 - 50S ribosomal protein L5 3341 46.03 -1 3545157..3545471 - 104 62181933 rplX SC3363 - 50S ribosomal protein L24 3342 50.00 0 3545482..3545853 - 123 62181934 rplN SC3364 - 50S ribosomal protein L14 3343 47.45 0 3546017..3546271 - 84 62181935 rpsQ SC3365 - 30S ribosomal protein S17 3344 53.12 0 3546271..3546462 - 63 62181936 rpmC SC3366 - 50S ribosomal protein L29 3345 52.31 0 3546462..3546872 - 136 62181937 rplP SC3367 - 50S ribosomal protein L16 3346 51.14 0 3546885..3547586 - 233 62181938 rpsC SC3368 - 30S ribosomal protein S3 3347 49.51 0 3547586..3547993 + 135 62181939 - SC3369 - hypothetical protein 3348 49.10 0 3547951..3548229 - 92 62181940 rpsS SC3370 - 30S ribosomal protein S19 3349 53.16 0 3548246..3549067 - 273 62181941 rplB SC3371 - 50S ribosomal protein L2 3350 48.84 0 3549085..3549387 - 100 62181942 rplW SC3372 - 50S ribosomal protein L23 3351 52.97 0 3549384..3549989 - 201 62181943 rplD SC3373 - 50S ribosomal protein L4 3352 51.43 0 3550000..3550629 - 209 62181944 rplC SC3374 - 50S ribosomal protein L3 3353 54.81 0 3550662..3550973 - 103 62181945 rpsJ SC3375 - 30S ribosomal protein S10 3354 52.19 0 3551227..3551820 + 197 62181946 hopD SC3376 - leader peptidase HopD 3355 42.77 -1 3551817..3552293 - 158 62181947 bfr SC3377 - bacterioferritin, iron storage and detoxification protein 3356 42.05 -1 3552366..3552560 - 64 62181948 bfd SC3378 - bacterioferritin-associated ferredoxin 3357 53.92 0 3552745..3553929 - 394 162139536 tuf SC3379 - elongation factor Tu 3358 51.77 0 3554001..3556115 - 704 62181950 fusA SC3380 - elongation factor G 3359 50.32 0 3556212..3556682 - 156 62181951 rpsG SC3381 - 30S ribosomal protein S7 3360 52.80 0 3556778..3557152 - 124 162139535 rpsL SC3382 - 30S ribosomal protein S12 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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