version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3179 53.10 0 3381881..3382735 + 284 62181767 gatY SC3197 - tagatose-bisphosphate aldolase 3180 52.91 0 3382856..3384127 + 423 62181768 gatZ SC3198 - putative tagatose 6-phosphate kinase 1 3181 54.19 0 3384142..3384606 + 154 62181769 ptkA SC3199 - galactitol-specific PTS system component IIA 3182 49.47 0 3384637..3384921 + 94 62181770 ptkB SC3200 - galactitol-specific PTS system component IIB 3183 54.95 0 3384925..3386298 + 457 62181771 ptkC SC3201 - PTS family galactitol-specific enzyme IIC 3184 55.36 0 3386342..3387385 + 347 62181772 gadD SC3202 - galactitol-1-phosphate dehydrogenase 3185 50.26 0 3387496..3388269 + 257 62181773 gadR SC3203 - transcriptional regulator of sugar metabolism 3186 55.44 0 3388427..3389290 - 287 62181774 yraL SC3204 - hypothetical protein 3187 58.25 +1 3389354..3391396 + 680 62181775 yraM SC3205 - paral putative transglycosylase 3188 56.31 0 3391354..3391749 + 131 162139542 yraN SC3206 - hypothetical protein 3189 51.44 0 3391771..3392361 + 196 62181777 yraO SC3207 - DnaA initiator-associating protein DiaA 3190 56.25 0 3392371..3392946 + 191 62181778 yraP SC3208 - hypothetical protein 3191 57.85 +1 3393013..3393681 - 222 62181779 yraR SC3209 - hypothetical protein 3192 53.56 0 3393779..3394297 + 172 62181780 yhbO SC3210 - hypothetical protein 3193 56.76 0 3394277..3394720 - 147 62181781 yhbP SC3211 - hypothetical protein 3194 52.62 0 3394713..3395075 + 120 62181782 yhbQ SC3212 - GIY-YIG nuclease superfamily protein 3195 56.15 0 3395062..3395565 - 167 62181783 yhbS SC3213 - ABC transporter membrane protein 3196 51.24 0 3395559..3396083 - 174 62181784 yhbT SC3214 - hypothetical protein 3197 58.63 +1 3396300..3397295 + 331 62181785 yhbU SC3215 - putative protease 3198 55.96 0 3397286..3398182 + 298 62181786 yhbV SC3216 - hypothetical protein 3199 58.23 +1 3398360..3399367 + 335 62181787 yhbW SC3217 - hypothetical protein 3200 46.53 0 3399345..3400064 - 239 62181788 yafK SC3218 - putative inner membrane protein 3201 40.11 -2 3400223..3400753 + 176 62181789 - SC3219 - putative cytoplasmic protein 3202 55.02 0 3400814..3402058 - 414 62181790 mtr SC3220 - tryptophan permease 3203 58.20 +1 3402212..3404101 - 629 162139541 deaD SC3221 - ATP-dependent RNA helicase DeaD 3204 48.36 0 3404280..3405164 - 294 62181792 nlpI SC3222 - lipoprotein NlpI 3205 55.82 0 3405274..3407439 - 721 62181793 pnp SC3223 - polynucleotide phosphorylase/polyadenylase 3206 50.00 0 3407651..3407920 - 89 62181794 rpsO SC3224 - 30S ribosomal protein S15 3207 55.66 0 3408071..3409015 - 314 62181795 truB SC3225 - tRNA pseudouridine synthase B 3208 53.73 0 3409015..3409416 - 133 62181796 rbfA SC3226 - ribosome-binding factor A 3209 55.47 0 3409637..3412315 - 892 62181797 infB SC3227 - translation initiation factor IF-2 3210 52.50 0 3412340..3413842 - 500 62181798 nusA SC3228 - transcription elongation factor NusA 3211 50.11 0 3413870..3414322 - 150 162139540 yhbC SC3229 - hypothetical protein 3212 53.65 0 3414950..3416293 + 447 162139539 argG SC3231 - argininosuccinate synthase 3213 51.35 0 3416591..3416923 - 110 162139538 secG SC3232 - preprotein translocase subunit SecG 3214 57.17 0 3417146..3418483 - 445 62181803 glmM SC3233 - phosphoglucosamine mutase 3215 55.35 0 3419430..3421373 - 647 62181804 hflB SC3234 - ATP-dependent metalloprotease 3216 51.20 0 3421468..3422094 - 208 62181805 rrmJ SC3235 - 23S rRNA methyltransferase J 3217 47.15 0 3422182..3422514 + 110 62181806 yhbY SC3236 - RNA-binding protein YhbY 3218 50.94 0 3422670..3423146 - 158 62181807 greA SC3237 - transcription elongation factor GreA 3219 54.95 0 3423394..3424827 + 477 62181808 dacB SC3238 - D-alanyl-D-alanine carboxypeptidase/endopeptidase 3220 55.41 0 3424958..3426130 - 390 62181809 obgE SC3239 - GTPase ObgE 3221 52.59 0 3426146..3427111 - 321 62181810 rhbE SC3240 - hypothetical protein 3222 49.22 0 3427241..3427498 - 85 62181811 rpmA SC3241 - 50S ribosomal protein L27 3223 49.06 0 3427563..3427880 + 105 62181812 - SC3242 - hypothetical protein 3224 51.92 0 3427913..3429058 + 381 62181813 ispB SC3243 - octaprenyl diphosphate synthase 3225 50.00 0 3429291..3429578 + 95 62181814 nlp SC3244 - DNA-binding transcriptional regulator Nlp 3226 58.17 +1 3429637..3430896 - 419 62181815 murA SC3245 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3227 50.00 0 3430950..3431243 - 97 62181816 yrbA SC3246 - BolA family transcriptional regulator 3228 59.60 +1 3431392..3431688 - 98 62181817 yrbB SC3247 - STAS domain-containing protein 3229 53.14 0 3431688..3432323 - 211 62181818 yrbC SC3248 - ABC transporter ATP-binding protein 3230 51.27 0 3432342..3432893 - 183 62181819 yrbD SC3249 - ABC transporter substrate-binding protein 3231 57.60 0 3432898..3433680 - 260 62181820 yrbE SC3250 - ABC transporter membrane protein 3232 58.06 +1 3433688..3434500 - 270 62181821 yrbF SC3251 - putative ABC transporter ATP-binding protein YrbF 3233 55.01 0 3434713..3435690 + 325 62181822 yrbG SC3252 - putative calcium/sodium:proton antiporter 3234 54.50 0 3435680..3436690 + 336 62181823 yrbH SC3253 - D-arabinose 5-phosphate isomerase 3235 54.85 0 3436711..3437277 + 188 62181824 yrbI SC3254 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3236 47.40 0 3437274..3437849 + 191 62181825 yrbK SC3255 - hypothetical protein 3237 51.91 0 3437797..3438372 + 191 62181826 yhbN SC3256 - hypothetical protein 3238 54.82 0 3438379..3439104 + 241 62181827 yhbG SC3257 - putative ABC transporter ATP-binding protein YhbG 3239 54.04 0 3439152..3440585 + 477 62181828 rpoN SC3258 - RNA polymerase factor sigma-54 3240 46.18 -1 3440608..3440895 + 95 62181829 yhbH SC3259 - putative sigma(54) modulation protein 3241 53.05 0 3441013..3441504 + 163 62181830 ptsN SC3260 - sugar-specific enzyme IIA component of PTS 3242 53.22 0 3441550..3442404 + 284 62181831 yhbJ SC3261 - hypothetical protein 3243 53.48 0 3442401..3442673 + 90 62181832 ptsO SC3262 - phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 3244 54.03 0 3442922..3443554 + 210 62181833 yrbL SC3263 - hypothetical protein 3245 55.97 0 3443629..3444357 - 242 62181834 mtgA SC3264 - monofunctional biosynthetic peptidoglycan transglycosylase 3246 56.88 0 3444354..3445007 - 217 62181835 yhbL SC3265 - isoprenoid biosynthesis protein 3247 52.03 0 3445234..3447570 - 778 62181836 arcB SC3266 - aerobic respiration control sensor protein ArcB 3248 56.99 0 3447664..3448593 - 309 62181837 yhcC SC3267 - hypothetical protein 3249 58.33 +1 3449265..3453725 + 1486 62181838 gltB SC3268 - glutamate synthase subunit alpha 3250 56.24 0 3453735..3455153 + 472 62181839 gltD SC3269 - glutamate synthase subunit beta 3251 49.91 0 3455360..3456463 + 367 62181840 yhcG SC3270 - hypothetical protein 3252 55.58 0 3456579..3457832 + 417 62181841 codB SC3271 - cytosine permease 3253 55.50 0 3457819..3459099 + 426 62181842 codA SC3272 - cytosine deaminase 3254 52.99 0 3459182..3459649 - 155 62181843 yhcH SC3273 - hypothetical protein 3255 59.25 +1 3459646..3460521 - 291 62181844 nanK SC3274 - N-acetylmannosamine kinase 3256 58.84 +1 3460518..3461207 - 229 62181845 nanE SC3275 - N-acetylmannosamine-6-phosphate 2-epimerase 3257 55.26 0 3461254..3462744 - 496 62181846 nanT SC3276 - putative sialic acid transporter 3258 54.03 0 3462860..3463753 - 297 62181847 nanA SC3277 - N-acetylneuraminate lyase 3259 52.53 0 3463888..3464679 - 263 62181848 yhcK SC3278 - transcriptional regulator NanR 3260 55.69 0 3464788..3465288 - 166 62181849 sspB SC3279 - ClpXP protease specificity-enhancing factor 3261 51.80 0 3465294..3465932 - 212 62181850 sspA SC3280 - stringent starvation protein A 3262 47.47 0 3466000..3466947 - 315 62181851 - SC3281 - putative cytoplasmic protein 3263 53.18 0 3467147..3467539 - 130 62181852 rpsI SC3282 - 30S ribosomal protein S9 3264 51.28 0 3467555..3467983 - 142 162139537 rplM SC3283 - 50S ribosomal protein L13 3265 55.73 0 3468286..3469410 - 374 62181854 yhcM SC3284 - putative ATPase 3266 52.84 0 3469597..3470001 + 134 62181855 yhcB SC3285 - cytochrome d ubiquinol oxidase subunit III 3267 54.24 0 3470158..3471525 + 455 62181856 degQ SC3286 - serine endoprotease 3268 54.44 0 3471618..3472688 + 356 62181857 degS SC3287 - serine endoprotease 3269 54.37 0 3472722..3473453 - 243 62181858 - SC3288 - putative inner membrane protein 3270 63.82 +2 3473473..3474774 - 433 62181859 oadB SC3289 - putative oxalacetate decarboxylase, subunit beta 3271 64.02 +2 3474787..3476562 - 591 62181860 oadA SC3290 - pyruvate carboxylase subunit B 3272 59.26 +1 3476578..3476820 - 80 62181861 oadG SC3291 - oxaloacetate decarboxylase subunit gamma 3273 46.44 0 3476977..3477594 - 205 62181862 ttdB SC3292 - L(+)-tartrate dehydratase subunit beta 3274 51.89 0 3477594..3478493 - 299 62181863 ttdA SC3293 - tartrate dehydratase subunit alpha 3275 51.60 0 3478526..3479866 - 446 62181864 - SC3294 - putative cation transporter 3276 49.70 0 3480005..3480670 - 221 62181865 - SC3295 - GntR family transcriptional regulator 3277 48.89 0 3480657..3481286 - 209 62181866 - SC3296 - GntR family transcriptional regulator 3278 53.67 0 3481406..3482344 - 312 62181867 mdh SC3297 - malate dehydrogenase 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0