version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3122 50.15 0 3319229..3319912 + 227 62181710 yis2 SC3140 - putative integrase protein 3123 55.66 0 3319929..3320582 - 217 62181711 ribB SC3141 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 3124 52.65 0 3320674..3321315 + 213 62181712 yqiC SC3142 - putative cytoplasmic protein 3125 48.04 0 3321390..3321593 - 67 62181713 glgS SC3143 - glycogen synthesis protein GlgS 3126 39.33 -2 3321696..3321845 - 49 62181714 - SC3144 - hypothetical protein 3127 52.98 0 3321857..3322477 + 206 62181715 yqiJ SC3145 - putative inner membrane protein 3128 53.69 0 3322496..3324175 + 559 62181716 yqiK SC3146 - paral putative membrane protein 3129 57.60 0 3324634..3326067 - 477 62181717 rfaE SC3147 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3130 57.10 0 3326115..3328958 - 947 62181718 glnE SC3148 - bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 3131 54.76 0 3329076..3330377 - 433 62181719 ygiF SC3149 - hypothetical protein 3132 50.41 0 3330619..3331233 + 204 62181720 ygiM SC3150 - putative signal transduction protein 3133 58.86 +1 3331296..3332537 + 413 62181721 cca SC3151 - multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 3134 53.94 0 3332642..3333466 - 274 62181722 uppP SC3152 - undecaprenyl pyrophosphate phosphatase 3135 50.41 0 3333561..3333923 - 120 62181723 folB SC3153 - bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 3136 56.05 0 3334027..3334638 + 203 62181724 ygiH SC3154 - putative glycerol-3-phosphate acyltransferase PlsY 3137 58.19 +1 3334888..3335901 - 337 62181725 gcp SC3155 - O-sialoglycoprotein endopeptidase 3138 51.85 0 3336129..3336344 + 71 62181726 rpsU SC3156 - 30S ribosomal protein S21 3139 51.66 0 3336580..3338325 + 581 62181727 dnaG SC3157 - DNA primase 3140 52.50 0 3338340..3340316 + 658 62181728 rpoD SC3158 - RNA polymerase sigma factor RpoD 3141 53.06 0 3340439..3340945 - 168 62181729 mug SC3159 - G/U mismatch-specific DNA glycosylase 3142 55.47 0 3341226..3341993 - 255 62181730 yqjH SC3160 - hypothetical protein 3143 53.86 0 3342225..3342872 + 215 62181731 yqjI SC3161 - putative transcriptional regulator 3144 50.64 0 3342869..3344434 - 521 62181732 mcp2 SC3162 - putative methyl-accepting chemotaxis protein 3145 55.49 0 3344822..3346342 - 506 62181733 aer SC3163 - aerotaxis sensor receptor, senses cellular redox state or proton motive force 3146 34.62 -2 3346354..3346509 + 51 62181734 - SC3164 - hypothetical protein 3147 54.44 0 3346745..3348151 + 468 162139543 oat SC3165 - putrescine--2-oxoglutarate aminotransferase 3148 58.84 +1 3348322..3350340 + 672 62181736 fadH SC3166 - 2,4-dieonyl-coa reductase 3149 53.47 0 3350421..3351557 - 378 62181737 ygjO SC3167 - hypothetical protein 3150 53.61 0 3351643..3352140 + 165 62181738 ygjP SC3168 - hypothetical protein 3151 54.11 0 3352292..3352984 + 230 62181739 ygjQ SC3169 - putative integral membrane protein 3152 53.55 0 3353073..3354071 + 332 62181740 ygjR SC3170 - putative dehydrogenase 3153 53.04 0 3354340..3355308 + 322 62181741 ygjT SC3171 - putative resistance protein 3154 55.98 0 3355563..3356807 + 414 62181742 ygjU SC3172 - serine/threonine transporter SstT 3155 52.34 0 3357257..3357919 + 220 62181743 yqjA SC3173 - DedA family, membrane protein 3156 51.30 0 3357923..3358306 + 127 62181744 yqjB SC3174 - hypothetical protein 3157 47.97 0 3358451..3358819 + 122 62181745 yqjC SC3175 - hypothetical protein 3158 56.21 0 3358861..3359166 + 101 62181746 yqjD SC3176 - hypothetical protein 3159 53.88 0 3359169..3359567 + 132 62181747 yqjE SC3177 - hypothetical protein 3160 60.00 +1 3359564..3359863 + 99 62181748 yqjK SC3178 - hypothetical protein 3161 50.00 0 3360008..3360493 + 161 62181749 yqjF SC3179 - putative membrane-associated protein 3162 53.01 0 3361671..3362036 + 121 62181750 yhaH SC3180 - hypothetical protein 3163 56.74 0 3362075..3362971 - 298 62181751 yhaJ SC3181 - LysR family transcriptional regulator 3164 54.13 0 3363076..3363777 + 233 62181752 yhaK SC3182 - hypothetical protein 3165 58.79 +1 3363801..3363965 + 54 62181753 yhaL SC3183 - hypothetical protein 3166 56.45 0 3364078..3365388 - 436 62181754 yhaN SC3184 - hypothetical protein 3167 50.30 0 3365414..3366745 - 443 62181755 yhaO SC3185 - HAAAP family transport protein 3168 57.14 0 3367060..3368424 - 454 62181756 tdcG SC3186 - L-serine deaminase 3169 54.81 0 3368494..3370788 - 764 62181757 tdcE SC3187 - pyruvate formate-lyase 4/ 2-ketobutyrate formate-lyase 3170 50.04 0 3370822..3372030 - 402 62181758 tdcD SC3188 - propionate/acetate kinase 3171 50.98 0 3372097..3373428 - 443 62181759 tdcC SC3189 - threonine/serine transporter TdcC 3172 46.36 0 3373449..3374438 - 329 62181760 tdcB SC3190 - threonine dehydratase 3173 44.62 -1 3374536..3375474 - 312 62181761 tdcA SC3191 - DNA-binding transcriptional activator TdcA 3174 46.12 -1 3376015..3376233 - 72 62181762 - SC3192 - hypothetical protein 3175 61.50 +1 3376188..3376574 + 128 62181763 - SC3193 - hypothetical protein 3176 55.32 0 3376593..3377738 - 381 62181764 garK SC3194 - glycerate kinase I 3177 56.57 0 3377836..3378726 - 296 62181765 garR SC3195 - tartronate semialdehyde reductase 3178 55.25 0 3378752..3379522 - 256 62181766 garL SC3196 - alpha-dehydro-beta-deoxy-D-glucarate aldolase 3179 53.10 0 3381881..3382735 + 284 62181767 gatY SC3197 - tagatose-bisphosphate aldolase 3180 52.91 0 3382856..3384127 + 423 62181768 gatZ SC3198 - putative tagatose 6-phosphate kinase 1 3181 54.19 0 3384142..3384606 + 154 62181769 ptkA SC3199 - galactitol-specific PTS system component IIA 3182 49.47 0 3384637..3384921 + 94 62181770 ptkB SC3200 - galactitol-specific PTS system component IIB 3183 54.95 0 3384925..3386298 + 457 62181771 ptkC SC3201 - PTS family galactitol-specific enzyme IIC 3184 55.36 0 3386342..3387385 + 347 62181772 gadD SC3202 - galactitol-1-phosphate dehydrogenase 3185 50.26 0 3387496..3388269 + 257 62181773 gadR SC3203 - transcriptional regulator of sugar metabolism 3186 55.44 0 3388427..3389290 - 287 62181774 yraL SC3204 - hypothetical protein 3187 58.25 +1 3389354..3391396 + 680 62181775 yraM SC3205 - paral putative transglycosylase 3188 56.31 0 3391354..3391749 + 131 162139542 yraN SC3206 - hypothetical protein 3189 51.44 0 3391771..3392361 + 196 62181777 yraO SC3207 - DnaA initiator-associating protein DiaA 3190 56.25 0 3392371..3392946 + 191 62181778 yraP SC3208 - hypothetical protein 3191 57.85 +1 3393013..3393681 - 222 62181779 yraR SC3209 - hypothetical protein 3192 53.56 0 3393779..3394297 + 172 62181780 yhbO SC3210 - hypothetical protein 3193 56.76 0 3394277..3394720 - 147 62181781 yhbP SC3211 - hypothetical protein 3194 52.62 0 3394713..3395075 + 120 62181782 yhbQ SC3212 - GIY-YIG nuclease superfamily protein 3195 56.15 0 3395062..3395565 - 167 62181783 yhbS SC3213 - ABC transporter membrane protein 3196 51.24 0 3395559..3396083 - 174 62181784 yhbT SC3214 - hypothetical protein 3197 58.63 +1 3396300..3397295 + 331 62181785 yhbU SC3215 - putative protease 3198 55.96 0 3397286..3398182 + 298 62181786 yhbV SC3216 - hypothetical protein 3199 58.23 +1 3398360..3399367 + 335 62181787 yhbW SC3217 - hypothetical protein 3200 46.53 0 3399345..3400064 - 239 62181788 yafK SC3218 - putative inner membrane protein 3201 40.11 -2 3400223..3400753 + 176 62181789 - SC3219 - putative cytoplasmic protein 3202 55.02 0 3400814..3402058 - 414 62181790 mtr SC3220 - tryptophan permease 3203 58.20 +1 3402212..3404101 - 629 162139541 deaD SC3221 - ATP-dependent RNA helicase DeaD 3204 48.36 0 3404280..3405164 - 294 62181792 nlpI SC3222 - lipoprotein NlpI 3205 55.82 0 3405274..3407439 - 721 62181793 pnp SC3223 - polynucleotide phosphorylase/polyadenylase 3206 50.00 0 3407651..3407920 - 89 62181794 rpsO SC3224 - 30S ribosomal protein S15 3207 55.66 0 3408071..3409015 - 314 62181795 truB SC3225 - tRNA pseudouridine synthase B 3208 53.73 0 3409015..3409416 - 133 62181796 rbfA SC3226 - ribosome-binding factor A 3209 55.47 0 3409637..3412315 - 892 62181797 infB SC3227 - translation initiation factor IF-2 3210 52.50 0 3412340..3413842 - 500 62181798 nusA SC3228 - transcription elongation factor NusA 3211 50.11 0 3413870..3414322 - 150 162139540 yhbC SC3229 - hypothetical protein 3212 53.65 0 3414950..3416293 + 447 162139539 argG SC3231 - argininosuccinate synthase 3213 51.35 0 3416591..3416923 - 110 162139538 secG SC3232 - preprotein translocase subunit SecG 3214 57.17 0 3417146..3418483 - 445 62181803 glmM SC3233 - phosphoglucosamine mutase 3215 55.35 0 3419430..3421373 - 647 62181804 hflB SC3234 - ATP-dependent metalloprotease 3216 51.20 0 3421468..3422094 - 208 62181805 rrmJ SC3235 - 23S rRNA methyltransferase J 3217 47.15 0 3422182..3422514 + 110 62181806 yhbY SC3236 - RNA-binding protein YhbY 3218 50.94 0 3422670..3423146 - 158 62181807 greA SC3237 - transcription elongation factor GreA 3219 54.95 0 3423394..3424827 + 477 62181808 dacB SC3238 - D-alanyl-D-alanine carboxypeptidase/endopeptidase 3220 55.41 0 3424958..3426130 - 390 62181809 obgE SC3239 - GTPase ObgE 3221 52.59 0 3426146..3427111 - 321 62181810 rhbE SC3240 - hypothetical protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0