version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3062 53.58 0 3261814..3263670 - 618 62181650 gsp SC3080 - bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 3063 54.56 0 3263897..3264763 + 288 62181651 yghU SC3081 - putative glutathione S-transferase YghU 3064 58.26 +1 3264831..3265484 - 217 62181652 mbp SC3082 - hypothetical protein 3065 53.66 0 3265532..3266584 - 350 62181653 fbp SC3083 - putative ferrichrome-binding periplasmic protein 3066 53.01 0 3266660..3266908 - 82 62181654 hybG SC3084 - hydrogenase 2 accessory protein HypG 3067 55.85 0 3266936..3267277 - 113 62181655 hypA SC3085 - hydrogenase nickel incorporation protein HybF 3068 57.26 0 3267270..3267758 - 162 62181656 hybE SC3086 - hydrogenase 2-specific chaperone 3069 54.55 0 3267751..3268245 - 164 62181657 hybD SC3087 - hydrogenase 2 maturation endopeptidase 3070 54.75 0 3268245..3269948 - 567 62181658 hybC SC3088 - hydrogenase 2 large subunit 3071 52.67 0 3269945..3271123 - 392 62181659 hybB SC3089 - putative hydrogenase 2 b cytochrome subunit 3072 53.80 0 3271113..3272099 - 328 62181660 hybA SC3090 - hydrogenase 2 protein HybA 3073 54.33 0 3272102..3273220 - 372 62181661 hypO SC3091 - hydrogenase 2 small subunit 3074 39.78 -2 3273228..3273413 - 61 62181662 - SC3092 - hypothetical protein 3075 46.88 0 3273410..3273697 - 95 62181663 yghW SC3093 - hypothetical protein 3076 56.93 0 3273782..3275425 - 547 62181664 mcp1 SC3094 - putative methyl-accepting chemotaxis protein 3077 48.69 0 3275732..3276226 - 164 62181665 yqhA SC3095 - hypothetical protein 3078 43.60 -1 3276505..3277020 - 171 62181666 - SC3096 - putative ATP-dependent RNA helicase-like protein 3079 43.07 -1 3277112..3277522 + 136 62181667 - SC3097 - hypothetical protein 3080 48.15 0 3277509..3277913 + 134 62181668 - SC3098 - hypothetical protein 3081 56.50 0 3278037..3278921 + 294 62181669 yghA SC3099 - oxidoreductase 3082 50.70 0 3279034..3279459 - 141 62181670 exbD SC3100 - biopolymer transport protein ExbD 3083 54.78 0 3279443..3280174 - 243 62181671 exbB SC3101 - biopolymer transport protein ExbB 3084 38.00 -2 3280182..3280331 - 49 62181672 - SC3102 - hypothetical protein 3085 50.50 0 3280415..3280816 + 133 62181673 - SC3103 - putative cytoplasmic protein 3086 50.00 0 3280987..3281670 + 227 62181674 yis2 SC3104 - putative integrase protein 3087 52.45 0 3281615..3282943 + 442 62181675 metC SC3105 - cystathionine beta-lyase 3088 53.64 0 3283083..3283742 + 219 62181676 yghB SC3106 - DedA family, membrane protein 3089 50.81 0 3283806..3284726 - 306 62181677 yqhC SC3107 - AraC/XylS family transcription factor 3090 55.41 0 3284898..3286061 + 387 62181678 yqhD SC3108 - putative alcohol dehydrogenase 3091 52.90 0 3286167..3286994 + 275 62181679 dkgA SC3109 - 2,5-diketo-D-gluconate reductase A 3092 55.53 0 3287191..3288645 + 484 62181680 sot SC3110 - putative cation transporter 3093 47.81 0 3288690..3289145 + 151 62181681 hit SC3111 - hypothetical protein 3094 57.09 0 3289700..3291871 - 723 62181682 ygiR SC3112 - hypothetical protein 3095 51.63 0 3292359..3293342 + 327 62181683 yiiZ SC3113 - putative dicarboxylate-binding periplasmic protein 3096 47.20 0 3293384..3293866 + 160 62181684 yiaM SC3114 - putative inner membrane protein 3097 51.22 0 3293877..3295184 + 435 62181685 ygiK SC3115 - putative integral membrane protein, transporter 3098 58.60 +1 3295229..3296641 - 470 62181686 sufI SC3116 - repressor protein for FtsI 3099 50.14 0 3296715..3297452 - 245 62181687 - SC3117 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 3100 55.87 0 3297709..3299958 - 749 62181688 parC SC3118 - DNA topoisomerase IV subunit A 3101 57.55 0 3300078..3300944 - 288 62181689 ygiV SC3119 - AraC family regulatory protein 3102 53.94 0 3301016..3301408 - 130 62181690 ygiW SC3120 - putative outer membrane protein 3103 52.77 0 3301407..3302219 + 270 62181691 ygiX SC3121 - DNA-binding transcriptional regulator QseB 3104 56.37 0 3302216..3303565 + 449 62181692 ygiY SC3122 - sensor protein QseC 3105 51.89 0 3303672..3304253 + 193 62181693 mdaB SC3123 - NADPH specific quinone oxidoreductase (drug modulator) 3106 52.38 0 3304285..3304599 + 104 62181694 ygiN SC3124 - hypothetical protein 3107 55.36 0 3304724..3306616 - 630 62181695 parE SC3125 - DNA topoisomerase IV subunit B 3108 54.64 0 3306644..3307225 - 193 62181696 yqiA SC3126 - esterase YqiA 3109 55.92 0 3307225..3308052 - 275 62181697 icc SC3127 - cyclic 3',5'-adenosine monophosphate phosphodiesterase 3110 50.59 0 3308077..3308499 - 140 62181698 yqiB SC3128 - hypothetical protein 3111 53.55 0 3308496..3309128 - 210 62181699 nudF SC3129 - ADP-ribose pyrophosphatase NudF 3112 52.45 0 3309335..3310804 + 489 162139544 tolC SC3130 - outer membrane channel protein 3113 58.18 +1 3311017..3311688 + 223 62181701 ygiB SC3131 - hypothetical protein 3114 51.03 0 3311694..3312857 + 387 62181702 ygiC SC3132 - hypothetical protein 3115 55.84 0 3312919..3313749 - 276 62181703 ygiD SC3133 - hypothetical protein 3116 56.33 0 3313848..3314621 + 257 62181704 ygiE SC3134 - zinc transporter ZupT 3117 44.07 -1 3314688..3314864 - 58 62181705 - SC3135 - hypothetical protein 3118 48.97 0 3315264..3317060 + 598 62181706 astJ SC3136 - putative arylsulfate sulfotransferase 3119 45.68 -1 3317080..3317751 + 223 62181707 dsbA SC3137 - putative thiol-disulfide isomerase and thioredoxin 3120 50.59 0 3317766..3318443 + 225 62181708 dsbI SC3138 - putative disulfide oxidoreductase 3121 50.50 0 3318657..3319058 + 133 62181709 - SC3139 - putative cytoplasmic protein 3122 50.15 0 3319229..3319912 + 227 62181710 yis2 SC3140 - putative integrase protein 3123 55.66 0 3319929..3320582 - 217 62181711 ribB SC3141 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 3124 52.65 0 3320674..3321315 + 213 62181712 yqiC SC3142 - putative cytoplasmic protein 3125 48.04 0 3321390..3321593 - 67 62181713 glgS SC3143 - glycogen synthesis protein GlgS 3126 39.33 -2 3321696..3321845 - 49 62181714 - SC3144 - hypothetical protein 3127 52.98 0 3321857..3322477 + 206 62181715 yqiJ SC3145 - putative inner membrane protein 3128 53.69 0 3322496..3324175 + 559 62181716 yqiK SC3146 - paral putative membrane protein 3129 57.60 0 3324634..3326067 - 477 62181717 rfaE SC3147 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3130 57.10 0 3326115..3328958 - 947 62181718 glnE SC3148 - bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 3131 54.76 0 3329076..3330377 - 433 62181719 ygiF SC3149 - hypothetical protein 3132 50.41 0 3330619..3331233 + 204 62181720 ygiM SC3150 - putative signal transduction protein 3133 58.86 +1 3331296..3332537 + 413 62181721 cca SC3151 - multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 3134 53.94 0 3332642..3333466 - 274 62181722 uppP SC3152 - undecaprenyl pyrophosphate phosphatase 3135 50.41 0 3333561..3333923 - 120 62181723 folB SC3153 - bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 3136 56.05 0 3334027..3334638 + 203 62181724 ygiH SC3154 - putative glycerol-3-phosphate acyltransferase PlsY 3137 58.19 +1 3334888..3335901 - 337 62181725 gcp SC3155 - O-sialoglycoprotein endopeptidase 3138 51.85 0 3336129..3336344 + 71 62181726 rpsU SC3156 - 30S ribosomal protein S21 3139 51.66 0 3336580..3338325 + 581 62181727 dnaG SC3157 - DNA primase 3140 52.50 0 3338340..3340316 + 658 62181728 rpoD SC3158 - RNA polymerase sigma factor RpoD 3141 53.06 0 3340439..3340945 - 168 62181729 mug SC3159 - G/U mismatch-specific DNA glycosylase 3142 55.47 0 3341226..3341993 - 255 62181730 yqjH SC3160 - hypothetical protein 3143 53.86 0 3342225..3342872 + 215 62181731 yqjI SC3161 - putative transcriptional regulator 3144 50.64 0 3342869..3344434 - 521 62181732 mcp2 SC3162 - putative methyl-accepting chemotaxis protein 3145 55.49 0 3344822..3346342 - 506 62181733 aer SC3163 - aerotaxis sensor receptor, senses cellular redox state or proton motive force 3146 34.62 -2 3346354..3346509 + 51 62181734 - SC3164 - hypothetical protein 3147 54.44 0 3346745..3348151 + 468 162139543 oat SC3165 - putrescine--2-oxoglutarate aminotransferase 3148 58.84 +1 3348322..3350340 + 672 62181736 fadH SC3166 - 2,4-dieonyl-coa reductase 3149 53.47 0 3350421..3351557 - 378 62181737 ygjO SC3167 - hypothetical protein 3150 53.61 0 3351643..3352140 + 165 62181738 ygjP SC3168 - hypothetical protein 3151 54.11 0 3352292..3352984 + 230 62181739 ygjQ SC3169 - putative integral membrane protein 3152 53.55 0 3353073..3354071 + 332 62181740 ygjR SC3170 - putative dehydrogenase 3153 53.04 0 3354340..3355308 + 322 62181741 ygjT SC3171 - putative resistance protein 3154 55.98 0 3355563..3356807 + 414 62181742 ygjU SC3172 - serine/threonine transporter SstT 3155 52.34 0 3357257..3357919 + 220 62181743 yqjA SC3173 - DedA family, membrane protein 3156 51.30 0 3357923..3358306 + 127 62181744 yqjB SC3174 - hypothetical protein 3157 47.97 0 3358451..3358819 + 122 62181745 yqjC SC3175 - hypothetical protein 3158 56.21 0 3358861..3359166 + 101 62181746 yqjD SC3176 - hypothetical protein 3159 53.88 0 3359169..3359567 + 132 62181747 yqjE SC3177 - hypothetical protein 3160 60.00 +1 3359564..3359863 + 99 62181748 yqjK SC3178 - hypothetical protein 3161 50.00 0 3360008..3360493 + 161 62181749 yqjF SC3179 - putative membrane-associated protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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