version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2932 54.81 0 3127565..3129724 - 719 62181519 aas SC2949 - bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 2933 56.17 0 3130316..3131344 + 342 62181520 galR SC2950 - DNA-binding transcriptional regulator GalR 2934 57.23 0 3131265..3132377 + 370 62181521 - SC2951 - putative transcriptional regulator 2935 57.17 0 3132387..3133649 - 420 62181522 lysA SC2952 - diaminopimelate decarboxylase 2936 58.23 +1 3133767..3134702 + 311 62181523 lysR SC2953 - DNA-binding transcriptional regulator LysR 2937 53.60 0 3134674..3135354 - 226 62181524 ygeA SC2954 - putative racemase 2938 52.64 0 3135494..3136912 - 472 62181525 araE SC2955 - major facilitator superfamily L-arabinose: proton symporter 2939 51.57 0 3137265..3138026 - 253 62181526 kduD SC2956 - 2-deoxy-D-gluconate 3-dehydrogenase 2940 51.25 0 3138083..3138919 - 278 62181527 kduI SC2957 - 5-keto-4-deoxyuronate isomerase 2941 58.35 +1 3139349..3140527 - 392 162139553 yqeF SC2958 - acetyl-CoA acetyltransferase 2942 57.18 0 3140650..3140997 - 115 62181529 - SC2959 - LysR family transcriptional regulator 2943 49.37 0 3141045..3141281 + 78 62181530 - SC2960 - putative inner membrane protein 2944 46.99 0 3141423..3142652 + 409 62181531 yqeG SC2961 - putative transport protein 2945 46.52 0 3142683..3142955 - 90 62181532 yohL SC2962 - hypothetical protein 2946 55.20 0 3144154..3144912 - 252 62181533 - SC2963 - hypothetical protein 2947 51.87 0 3144899..3145405 - 168 62181534 - SC2964 - hypothetical protein 2948 36.61 -2 3145512..3145694 - 60 62181535 - SC2965 - putative outer membrane protein 2949 40.20 -2 3145796..3146581 - 261 62181536 - SC2966 - hypothetical protein 2950 58.47 +1 3146578..3147321 - 247 62181537 stdC SC2967 - putative fimbrial chaparone protein 2951 60.80 +1 3147362..3149851 - 829 62181538 stdB SC2968 - putative outer membrane usher protein 2952 48.80 0 3149971..3150681 - 236 62181539 stdA SC2969 - putative fimbrial-like protein 2953 45.02 -1 3151274..3151906 - 210 62181540 yfdX SC2970 - hypothetical protein 2954 48.98 0 3151953..3152489 - 178 62181541 pagC SC2971 - outer membrane protein (associated with virulence) 2955 31.14 -2 3152535..3152762 - 75 62181542 - SC2972 - hypothetical protein 2956 50.63 0 3153295..3153693 - 132 62181543 pilT SC2973 - plasmid maintenance protein 2957 46.72 0 3153693..3154058 - 121 62181544 yge SC2974 - putative cytoplasmic protein 2958 48.81 0 3154129..3154380 + 83 62181545 - SC2975 - putative periplasmic protein 2959 52.80 0 3154821..3155462 + 213 62181546 - SC2976 - hypothetical protein 2960 54.02 0 3155747..3156505 - 252 62181548 ygeR SC2978 - putative metalloendopeptidase 2961 52.20 0 3156770..3157315 + 181 62181549 idi SC2979 - isopentenyl-diphosphate delta-isomerase 2962 54.15 0 3157391..3158908 - 505 62181550 lysS SC2980 - lysyl-tRNA synthetase 2963 54.31 0 3158918..3159799 - 293 62181551 prfB SC2981 - peptide chain release factor RF-2 2964 57.61 0 3160121..3161854 - 577 62181552 recJ SC2982 - ssDNA exonuclease RecJ 2965 50.42 0 3161860..3162573 - 237 62181553 dsbC SC2983 - thiol:disulfide interchange protein DsbC 2966 54.07 0 3162597..3163493 - 298 62181554 xerD SC2984 - site-specific tyrosine recombinase XerD 2967 52.68 0 3163606..3164127 + 173 162139552 fldB SC2985 - flavodoxin FldB 2968 54.83 0 3164180..3164593 - 137 62181556 ygfX SC2986 - hypothetical protein 2969 44.19 -1 3164574..3164840 - 88 62181557 ygfY SC2987 - hypothetical protein 2970 43.88 -1 3164839..3165075 + 78 62181558 - SC2988 - hypothetical protein 2971 56.78 0 3165090..3166070 + 326 62181559 ygfZ SC2989 - putative global regulator 2972 50.91 0 3166186..3166845 - 219 62181560 yqfA SC2990 - hypothetical protein 2973 45.19 -1 3167009..3167320 - 103 62181561 yqfB SC2991 - hypothetical protein 2974 51.26 0 3167478..3168911 + 477 62181562 bglA SC2992 - 6-phospho-beta-glucosidase A 2975 43.96 -1 3168959..3169852 - 297 62181563 - SC2993 - putative outer membrane protein 2976 56.68 0 3170308..3173181 - 957 162139551 gcvP SC2994 - glycine dehydrogenase 2977 54.87 0 3173344..3173733 - 129 62181565 gcvH SC2995 - glycine cleavage system protein H 2978 55.62 0 3173759..3174853 - 364 62181566 gcvT SC2996 - glycine cleavage system aminomethyltransferase T 2979 57.36 0 3175308..3176510 - 400 62181567 - SC2997 - hypothetical protein 2980 60.90 +1 3176633..3177811 - 392 62181568 ubiH SC2998 - 2-octaprenyl-6-methoxyphenyl hydroxylase 2981 56.04 0 3177808..3179124 - 438 62181569 pepP SC2999 - proline aminopeptidase P II 2982 54.06 0 3179150..3179728 - 192 162139550 ygfB SC3000 - hypothetical protein 2983 47.58 0 3179895..3180224 + 109 62181571 ygfE SC3001 - Z-ring-associated protein 2984 56.95 0 3180471..3181067 + 198 62181572 ygfA SC3002 - putative ligase 2985 55.31 0 3181449..3182681 - 410 62181573 serA SC3003 - D-3-phosphoglycerate dehydrogenase 2986 54.70 0 3182948..3183607 - 219 62181574 rpiA SC3004 - ribose-5-phosphate isomerase A 2987 57.94 +1 3183761..3184654 + 297 62181575 iciA SC3005 - chromosome replication initiation inhibitor protein 2988 50.79 0 3184666..3184917 + 83 62181576 - SC3006 - hypothetical protein 2989 55.56 0 3184920..3185666 - 248 62181577 yggE SC3007 - hypothetical protein 2990 54.87 0 3185760..3186395 - 211 62181578 yggA SC3008 - arginine exporter protein 2991 50.87 0 3186596..3187456 - 286 62181579 yggB SC3009 - mechanosensitive channel MscS 2992 51.20 0 3187689..3188768 - 359 162139549 fba SC3010 - fructose-bisphosphate aldolase 2993 54.38 0 3188870..3190033 - 387 62181581 pgk SC3011 - phosphoglycerate kinase 2994 53.87 0 3190055..3191101 - 348 62181582 epd SC3012 - erythrose 4-phosphate dehydrogenase 2995 56.57 0 3191475..3191900 + 141 62181583 - SC3013 - hypothetical protein 2996 55.79 0 3191926..3192504 + 192 62181584 - SC3014 - hypothetical protein 2997 59.46 +1 3192505..3193212 + 235 62181585 - SC3015 - hypothetical protein 2998 55.90 0 3193200..3193877 + 225 62181586 cbiO SC3016 - putative ABC-type cobalt transport system, ATPase component 2999 58.55 +1 3193826..3194527 + 233 62181587 cysA SC3017 - putative ABC-type cobalt transport system, ATPase component 3000 57.48 0 3194571..3196562 - 663 62181588 tktA SC3018 - transketolase 3001 54.55 0 3196838..3197596 + 252 62181589 yggG SC3019 - putative Zn-dependent protease with chaperone function 3002 55.48 0 3197697..3198617 - 306 62181590 speB SC3020 - agmatinase 3003 40.72 -1 3201329..3201802 - 157 62181591 yhcH SC3021 - putative mannitol dehydrogenase 3004 51.19 0 3201841..3202848 - 335 62181592 yjmC SC3022 - putative malate/L-lactate dehydrogenase 3005 51.33 0 3202862..3203878 - 338 62181593 yjjN SC3023 - putative zinc-binding dehydrogenase 3006 44.94 -1 3206586..3207386 - 266 62181594 uxuR SC3024 - GntR family transcriptional regulator 3007 47.95 0 3207540..3208271 - 243 62181595 - SC3025 - putative outer membrane lipoprotein 3008 55.61 0 3208416..3210314 - 632 62181596 speA SC3026 - arginine decarboxylase 3009 44.70 -1 3210401..3210532 - 43 62181597 yqgB SC3027 - hypothetical protein 3010 50.91 0 3210666..3210830 + 54 62181598 yqgC SC3028 - putative cytoplasmic protein 3011 45.33 -1 3210827..3211126 - 99 62181599 yqgD SC3029 - putative inner membrane protein 3012 54.29 0 3211182..3212336 + 384 62181600 metK SC3030 - S-adenosylmethionine synthetase 3013 55.20 0 3212829..3214223 + 464 62181601 galP SC3031 - major facilitator superfamily galactose:proton symporter 3014 57.83 +1 3214302..3214799 + 165 62181602 sprT SC3032 - hypothetical protein 3015 56.50 0 3214895..3215602 + 235 62181603 endA SC3033 - DNA-specific endonuclease I 3016 54.51 0 3215679..3216410 + 243 162139548 yggJ SC3034 - hypothetical protein 3017 54.32 0 3216430..3217377 + 315 62181605 gshB SC3035 - glutathione synthetase 3018 52.48 0 3217593..3218156 + 187 162139547 yqgE SC3036 - hypothetical protein 3019 54.92 0 3218156..3218572 + 138 62181607 yqgF SC3037 - Holliday junction resolvase-like protein 3020 55.51 0 3218619..3219335 - 238 62181608 - SC3038 - putative transcriptional regulator 3021 57.19 0 3219437..3220417 - 326 62181609 yggR SC3039 - putative protein transport 3022 53.90 0 3220435..3221139 + 234 62181610 yggS SC3040 - hypothetical protein 3023 51.85 0 3221158..3221724 + 188 62181611 yggT SC3041 - hypothetical protein 3024 52.23 0 3221721..3222011 + 96 162139546 yggU SC3042 - hypothetical protein 3025 55.05 0 3222019..3222612 + 197 62181613 yggV SC3043 - putative deoxyribonucleotide triphosphate pyrophosphatase 3026 54.76 0 3222566..3223741 + 391 62181614 yggW SC3044 - coproporphyrinogen III oxidase 3027 45.63 -1 3223833..3224840 - 335 62181615 yggM SC3045 - putative periplasmic protein 3028 52.53 0 3224973..3226019 - 348 62181616 ansB SC3046 - L-asparaginase II 3029 37.25 -2 3226038..3226190 - 50 62181617 - SC3047 - hypothetical protein 3030 54.72 0 3226208..3226927 - 239 62181618 yggN SC3048 - hypothetical protein 3031 47.71 0 3226977..3227303 - 108 62181619 yggL SC3049 - hypothetical protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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