version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2865 51.25 0 3047033..3047830 - 265 62181451 - SC2881 - beta-lactamase family hydrolase 2866 50.50 0 3047938..3048339 + 133 62181452 - SC2882 - putative cytoplasmic protein 2867 50.15 0 3048510..3049193 + 227 62181453 int SC2883 - putative integrase protein 2868 51.49 0 3049995..3050666 - 223 62181454 ygcF SC2884 - hypothetical protein 2869 43.33 -1 3050650..3050799 - 49 62181455 - SC2885 - hypothetical protein 2870 52.27 0 3050802..3052100 - 432 62181456 eno SC2886 - phosphopyruvate hydratase 2871 52.32 0 3052183..3053820 - 545 62181457 pyrG SC2887 - CTP synthetase 2872 52.56 0 3054048..3054848 - 266 62181458 mazG SC2888 - nucleoside triphosphate pyrophosphohydrolase 2873 49.49 0 3055456..3056043 + 195 62181459 stfA SC2889 - putative fimbrial subunit 2874 55.37 0 3056123..3058822 + 899 62181460 steB SC2890 - outer membrane usher protein 2875 54.91 0 3058835..3059608 + 257 62181461 stfD SC2891 - putative periplasmic fimbrial chaperone 2876 55.32 0 3059580..3060134 + 184 62181462 stfE SC2892 - putaive minor fimbrial subunit 2877 50.21 0 3060134..3060619 + 161 62181463 stfF SC2893 - putative minor fimbrial subunit 2878 52.51 0 3060616..3061152 + 178 62181464 yfcP SC2894 - fimbrial subunit 2879 36.73 -2 3061207..3062031 + 274 62181465 - SC2895 - hypothetical protein 2880 55.70 0 3062588..3064822 - 744 62181466 relA SC2896 - GDP/GTP pyrophosphokinase 2881 54.48 0 3064874..3066169 - 431 62181467 rumA SC2897 - 23S rRNA 5-methyluridine methyltransferase 2882 52.59 0 3066226..3068982 + 918 62181468 barA SC2898 - hybrid sensory histidine kinase BarA 2883 58.09 +1 3069026..3070168 - 380 62181469 grk SC2899 - hypothetical protein 2884 55.33 0 3070246..3071586 - 446 62181470 gudD SC2900 - d-glucarate dehydratase 2885 52.10 0 3072944..3074302 - 452 62181471 gudT SC2901 - MFS superfamily, D-glucarate permease 2886 46.03 -1 3074382..3074633 + 83 62181472 - SC2902 - hypothetical protein 2887 54.00 0 3074783..3075232 - 149 62181473 yqcA SC2903 - flavodoxin 2888 58.49 +1 3075251..3076033 - 260 62181474 yqcB SC2904 - tRNA pseudouridine synthase C 2889 54.26 0 3076033..3076419 - 128 62181475 yqcC SC2905 - hypothetical protein 2890 52.38 0 3076974..3077519 - 181 62181476 syd SC2906 - SecY interacting protein Syd 2891 53.12 0 3077588..3078436 + 282 62181477 queF SC2907 - 7-cyano-7-deazaguanine reductase 2892 54.87 0 3078549..3079913 + 454 62181478 ygdH SC2908 - hypothetical protein 2893 53.26 0 3080478..3081767 + 429 62181479 sdaC SC2909 - HAAAP family, serine transport protein 2894 56.21 0 3081826..3083193 + 455 62181480 sdaB SC2910 - L-serine dehydratase (L-threonine deaminase 2) 2895 55.64 0 3083304..3084119 + 271 62181481 xni SC2911 - exonuclease IX 2896 55.29 0 3084211..3085353 - 380 62181482 fucO SC2912 - L-1,2-propanediol oxidoreductase 2897 52.62 0 3085370..3086017 - 215 62181483 fucA SC2913 - L-fuculose phosphate aldolase 2898 37.50 -2 3086171..3086338 - 55 62181484 - SC2914 - hypothetical protein 2899 50.19 0 3086573..3087889 + 438 62181485 fucP SC2915 - L-fucose transporter 2900 57.49 0 3087921..3089696 + 591 62181486 fucI SC2916 - L-fucose isomerase 2901 58.91 +1 3089797..3091215 + 472 62181487 fucK SC2917 - L-fuculokinase 2902 54.37 0 3091217..3091639 + 140 62181488 fucU SC2918 - fucose operon protein 2903 49.65 0 3091697..3092407 + 236 62181489 fucR SC2919 - DNA-binding transcriptional activator FucR 2904 53.13 0 3092466..3093566 - 366 62181490 ygdE SC2920 - putative RNA 2'-O-ribose methyltransferase 2905 56.31 0 3093559..3093954 - 131 62181491 ygdD SC2921 - hypothetical protein 2906 50.65 0 3093973..3094890 - 305 62181492 gcvA SC2922 - DNA-binding transcriptional activator GcvA 2907 45.61 -1 3095229..3095456 - 75 62181493 ygdI SC2923 - putative lipoprotein 2908 59.95 +1 3095649..3096854 + 401 62181494 csdA SC2924 - cysteine sulfinate desulfinase 2909 57.43 0 3096854..3097297 + 147 62181495 ygdK SC2925 - hypothetical protein 2910 41.75 -1 3097570..3098484 + 304 62181496 rarD SC2926 - hypothetical protein 2911 56.26 0 3098536..3099342 - 268 62181497 ygdL SC2927 - hypothetical protein 2912 54.55 0 3099452..3100549 - 365 62181498 mltA SC2928 - murein transglycosylase A 2913 53.51 0 3101049..3102302 - 417 62181499 amiC SC2929 - N-acetylmuramoyl-L-alanine amidase 2914 52.85 0 3102535..3103866 + 443 62181500 argA SC2930 - N-acetylglutamate synthase 2915 58.33 +1 3103969..3105804 - 611 62181501 RecD SC2931 - exonuclease V subunit alpha 2916 55.61 0 3105801..3109346 - 1181 62181502 RecB SC2932 - exonuclease V subunit beta 2917 52.30 0 3109339..3112227 - 962 62181503 ptr SC2933 - protease III 2918 53.83 0 3112405..3115776 - 1123 62181504 recC SC2934 - exonuclease V subunit gamma 2919 53.27 0 3115792..3116112 - 106 62181505 ppdC SC2935 - hypothetical protein 2920 55.64 0 3116097..3116504 - 135 62181506 ygdB SC2936 - hypothetical protein 2921 53.37 0 3116501..3117064 - 187 62181507 ppdB SC2937 - hypothetical protein 2922 55.41 0 3117055..3117525 - 156 62181508 ppdA SC2938 - hypothetical protein 2923 51.70 0 3117710..3118504 - 264 62181510 thyA SC2940 - thymidylate synthase 2924 53.88 0 3118511..3119386 - 291 62181511 lgt SC2941 - prolipoprotein diacylglyceryl transferase 2925 57.01 0 3119602..3121848 - 748 62181512 ptsP SC2942 - fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein 2926 50.66 0 3121861..3122391 - 176 62181513 ygdP SC2943 - dinucleoside polyphosphate hydrolase 2927 57.90 +1 3123074..3123769 + 231 62181514 mutH SC2944 - DNA mismatch repair protein 2928 50.98 0 3123951..3124664 + 237 62181515 ygdQ SC2945 - hypothetical protein 2929 47.49 0 3124834..3125052 + 72 62181516 ygdR SC2946 - POT family peptide transport protein 2930 54.85 0 3125243..3126283 + 346 62181517 tas SC2947 - putative aldo-keto reductase 2931 58.69 +1 3126370..3127572 - 400 62181518 ygeD SC2948 - hypothetical protein 2932 54.81 0 3127565..3129724 - 719 62181519 aas SC2949 - bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 2933 56.17 0 3130316..3131344 + 342 62181520 galR SC2950 - DNA-binding transcriptional regulator GalR 2934 57.23 0 3131265..3132377 + 370 62181521 - SC2951 - putative transcriptional regulator 2935 57.17 0 3132387..3133649 - 420 62181522 lysA SC2952 - diaminopimelate decarboxylase 2936 58.23 +1 3133767..3134702 + 311 62181523 lysR SC2953 - DNA-binding transcriptional regulator LysR 2937 53.60 0 3134674..3135354 - 226 62181524 ygeA SC2954 - putative racemase 2938 52.64 0 3135494..3136912 - 472 62181525 araE SC2955 - major facilitator superfamily L-arabinose: proton symporter 2939 51.57 0 3137265..3138026 - 253 62181526 kduD SC2956 - 2-deoxy-D-gluconate 3-dehydrogenase 2940 51.25 0 3138083..3138919 - 278 62181527 kduI SC2957 - 5-keto-4-deoxyuronate isomerase 2941 58.35 +1 3139349..3140527 - 392 162139553 yqeF SC2958 - acetyl-CoA acetyltransferase 2942 57.18 0 3140650..3140997 - 115 62181529 - SC2959 - LysR family transcriptional regulator 2943 49.37 0 3141045..3141281 + 78 62181530 - SC2960 - putative inner membrane protein 2944 46.99 0 3141423..3142652 + 409 62181531 yqeG SC2961 - putative transport protein 2945 46.52 0 3142683..3142955 - 90 62181532 yohL SC2962 - hypothetical protein 2946 55.20 0 3144154..3144912 - 252 62181533 - SC2963 - hypothetical protein 2947 51.87 0 3144899..3145405 - 168 62181534 - SC2964 - hypothetical protein 2948 36.61 -2 3145512..3145694 - 60 62181535 - SC2965 - putative outer membrane protein 2949 40.20 -2 3145796..3146581 - 261 62181536 - SC2966 - hypothetical protein 2950 58.47 +1 3146578..3147321 - 247 62181537 stdC SC2967 - putative fimbrial chaparone protein 2951 60.80 +1 3147362..3149851 - 829 62181538 stdB SC2968 - putative outer membrane usher protein 2952 48.80 0 3149971..3150681 - 236 62181539 stdA SC2969 - putative fimbrial-like protein 2953 45.02 -1 3151274..3151906 - 210 62181540 yfdX SC2970 - hypothetical protein 2954 48.98 0 3151953..3152489 - 178 62181541 pagC SC2971 - outer membrane protein (associated with virulence) 2955 31.14 -2 3152535..3152762 - 75 62181542 - SC2972 - hypothetical protein 2956 50.63 0 3153295..3153693 - 132 62181543 pilT SC2973 - plasmid maintenance protein 2957 46.72 0 3153693..3154058 - 121 62181544 yge SC2974 - putative cytoplasmic protein 2958 48.81 0 3154129..3154380 + 83 62181545 - SC2975 - putative periplasmic protein 2959 52.80 0 3154821..3155462 + 213 62181546 - SC2976 - hypothetical protein 2960 54.02 0 3155747..3156505 - 252 62181548 ygeR SC2978 - putative metalloendopeptidase 2961 52.20 0 3156770..3157315 + 181 62181549 idi SC2979 - isopentenyl-diphosphate delta-isomerase 2962 54.15 0 3157391..3158908 - 505 62181550 lysS SC2980 - lysyl-tRNA synthetase 2963 54.31 0 3158918..3159799 - 293 62181551 prfB SC2981 - peptide chain release factor RF-2 2964 57.61 0 3160121..3161854 - 577 62181552 recJ SC2982 - ssDNA exonuclease RecJ 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0