version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2783 36.94 -2 2965634..2966521 - 295 62181369 hilC SC2799 - AraC family transcription regulator 2784 45.92 -1 2966866..2967318 - 150 62181370 - SC2800 - putative cytoplasmic protein 2785 44.93 -1 2967315..2967995 - 226 62181371 orgB SC2801 - putative flagellar biosynthesis/type III secretory pathway protein 2786 48.19 0 2967952..2968530 - 192 62181372 orgA SC2802 - putative inner membrane protein 2787 45.59 -1 2968523..2969281 - 252 62181373 prgK SC2803 - cell invasion protein; lipoprotein, may link inner and outer membranes 2788 47.39 0 2969278..2969583 - 101 62181374 prgJ SC2804 - cell invasion protein; cytoplasmic 2789 46.09 -1 2969602..2969844 - 80 62181375 prgI SC2805 - cell invasion protein; cytoplasmic 2790 48.87 0 2969869..2971104 - 411 62181376 prgH SC2806 - cell invasion protein 2791 40.86 -1 2971363..2972292 + 309 62181377 hilD SC2807 - regulatory protein 2792 43.14 -1 2973384..2975045 + 553 62181378 hilA SC2808 - invasion protein regulator 2793 40.99 -1 2975063..2975545 + 160 62181379 iagB SC2809 - cell invasion protein 2794 44.36 -1 2975599..2977230 - 543 62181380 sptP SC2810 - protein tyrosine phosphate 2795 39.03 -2 2977217..2977567 - 116 62181381 sicP SC2811 - chaparone, related to virulence 2796 39.08 -2 2977636..2977896 - 86 62181382 - SC2812 - hypothetical protein 2797 38.96 -2 2977940..2978188 - 82 62181383 iacp SC2813 - acyl carrier protein 2798 48.10 0 2978207..2980264 - 685 62181384 sipA SC2814 - cell invasion protein 2799 47.09 0 2980283..2981314 - 343 62181385 sipD SC2815 - cell invasion protein 2800 47.48 0 2981385..2982614 - 409 62181386 sipC SC2816 - cell invasion protein 2801 51.80 0 2982642..2984423 - 593 62181387 sipB SC2817 - cell invasion protein 2802 43.37 -1 2984426..2984923 - 165 62181388 sicA SC2818 - surface presentation of antigens; secretory proteins 2803 43.42 -1 2985061..2986131 - 356 62181389 spaS SC2819 - surface presentation of antigens protein SpaS 2804 50.00 0 2986118..2986909 - 263 62181390 spaR SC2820 - surface presentation of antigens; secretory proteins 2805 46.74 0 2986913..2987173 - 86 62181391 spaQ SC2821 - surface presentation of antigens; secretory proteins 2806 41.93 -1 2987199..2987873 - 224 62181392 spaP SC2822 - surface presentation of antigens protein SpaP 2807 52.96 0 2987863..2988774 - 303 62181393 spaO SC2823 - surface presentation of antigens protein SpaO 2808 49.06 0 2988774..2989784 - 336 62181394 invJ SC2824 - surface presentation of antigens; secretory proteins 2809 43.47 -1 2989784..2990227 - 147 62181395 invI SC2825 - surface presentation of antigens; secretory proteins 2810 54.48 0 2990205..2991500 - 431 62181396 invC SC2826 - ATP synthase SpaL 2811 43.87 -1 2991497..2991904 - 135 62181397 invB SC2827 - surface presentation of antigens; secretory proteins 2812 45.58 -1 2991928..2993985 - 685 62181398 invA SC2828 - invasion protein 2813 45.49 -1 2994010..2995128 - 372 62181399 invE SC2829 - invasion protein 2814 46.24 -1 2995125..2996813 - 562 62181400 invG SC2830 - invasion protein; outer membrane 2815 46.46 0 2996810..2997571 - 253 62181401 invF SC2831 - invasion protein 2816 42.57 -1 2997916..2998359 + 147 62181402 invH SC2832 - invasion protein 2817 48.94 0 2999241..2999522 + 93 62181403 - SC2833 - putative ABC-type transport system 2818 47.16 0 2999519..3000046 + 175 62181404 - SC2834 - putative acetyltransferase 2819 56.50 0 3000119..3000295 - 58 62181405 - SC2835 - putative cytoplasmic protein 2820 41.55 -1 3000672..3001328 + 218 62181406 pphB SC2836 - serine/threonine-specific protein phosphatase 2 2821 48.28 0 3001573..3002067 - 164 62181407 - SC2837 - hypothetical protein 2822 53.66 0 3002094..3002762 - 222 62181408 - SC2838 - hypothetical protein 2823 43.48 -1 3003185..3003322 - 45 62181409 tnpA SC2839 - hypothetical protein 2824 41.61 -1 3003337..3003747 - 136 62181410 - SC2840 - hypothetical protein 2825 57.05 0 3003905..3006472 + 855 62181411 mutS SC2841 - DNA mismatch repair protein 2826 55.64 0 3006528..3006908 - 126 62181412 - SC2842 - hypothetical protein 2827 58.98 +1 3009168..3010664 - 498 62181413 - SC2843 - putative permease 2828 55.94 0 3010661..3011611 - 316 62181414 - SC2844 - putative nucleoside-diphosphate-sugar epimerase 2829 57.27 0 3011651..3012427 - 258 62181415 ygbM SC2845 - hypothetical protein 2830 56.03 0 3012432..3013070 - 212 62181416 ygbL SC2846 - putative aldolase 2831 59.70 +1 3013067..3014329 - 420 62181417 ygbK SC2847 - paral putative tRNA synthase 2832 59.96 +1 3014323..3015246 - 307 62181418 ygbJ SC2848 - 3-hydroxyisobutyrate dehydrogenase 2833 55.69 0 3015443..3016207 + 254 62181419 ygbI SC2849 - DeoR family transcriptional regulator 2834 53.09 0 3016226..3016630 - 134 62181420 hcrR SC2850 - putative transcriptional regulator 2835 57.74 +1 3016801..3017394 + 197 62181421 pad SC2851 - putative flavoprotein 2836 55.25 0 3017394..3018821 + 475 62181422 vdcC SC2852 - hypothetical protein 2837 50.59 0 3018832..3019086 + 84 62181423 - SC2853 - hypothetical protein 2838 50.15 0 3019067..3019750 - 227 62181424 int SC2854 - putative integrase protein 2839 50.50 0 3019921..3020322 - 133 62181425 - SC2855 - putative cytoplasmic protein 2840 52.37 0 3020428..3021420 - 330 62181426 rpoS SC2856 - RNA polymerase sigma factor RpoS 2841 51.87 0 3021483..3022604 - 373 62181427 nlpD SC2857 - lipoprotein NlpD 2842 56.62 0 3022780..3023406 - 208 62181428 pcm SC2858 - protein-L-isoaspartate O-methyltransferase 2843 56.17 0 3023400..3024161 - 253 62181429 surE SC2859 - stationary phase survival protein SurE 2844 54.29 0 3024142..3025191 - 349 62181430 truD SC2860 - tRNA pseudouridine synthase D 2845 56.67 0 3025188..3025667 - 159 62181431 ispF SC2861 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2846 57.81 +1 3025667..3026377 - 236 62181432 ispD SC2862 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2847 54.17 0 3026396..3026707 - 103 62181433 ftsB SC2863 - cell division protein FtsB 2848 47.62 0 3026898..3027254 - 118 62181434 ygbE SC2864 - hypothetical protein 2849 54.46 0 3027272..3027877 - 201 62181435 - SC2865 - adenylylsulfate kinase 2850 55.21 0 3027864..3029303 - 479 62181436 cysN SC2866 - sulfate adenylyltransferase subunit 1 2851 53.03 0 3029313..3030221 - 302 62181437 cysD SC2867 - sulfate adenylyltransferase subunit 2 2852 51.86 0 3030472..3031518 + 348 62181438 iap SC2868 - alkaline phosphatase isozyme conversion aminopeptidase 2853 48.98 0 3031902..3032195 - 97 62181439 ygbF SC2869 - hypothetical protein 2854 55.37 0 3032195..3033115 - 306 62181440 ygbT SC2870 - putative cytoplasmic protein 2855 56.37 0 3033112..3033762 - 216 62181441 ygcH SC2871 - putative cytoplasmic protein 2856 57.70 0 3033744..3034490 - 248 62181442 ygcI SC2872 - putative cytoplasmic protein 2857 52.97 0 3034501..3035559 - 352 62181443 yghJ SC2873 - putative cytoplasmic protein 2858 50.64 0 3035573..3036121 - 182 62181444 tnpA SC2874 - putative transposase 2859 34.52 -2 3040429..3040680 + 83 62181445 - SC2875 - hypothetical protein 2860 40.88 -1 3040796..3041749 + 317 62181446 sopD SC2876 - hypothetical protein 2861 55.65 0 3041837..3042571 - 244 62181447 cysH SC2877 - phosphoadenosine phosphosulfate reductase 2862 56.78 0 3042619..3044358 - 579 62181448 cysI SC2878 - sulfite reductase subunit beta 2863 58.00 +1 3044358..3046157 - 599 62181449 cysJ SC2879 - sulfite reductase subunit alpha 2864 52.89 0 3046581..3046943 + 120 62181450 ptpS SC2880 - putative synthase 2865 51.25 0 3047033..3047830 - 265 62181451 - SC2881 - beta-lactamase family hydrolase 2866 50.50 0 3047938..3048339 + 133 62181452 - SC2882 - putative cytoplasmic protein 2867 50.15 0 3048510..3049193 + 227 62181453 int SC2883 - putative integrase protein 2868 51.49 0 3049995..3050666 - 223 62181454 ygcF SC2884 - hypothetical protein 2869 43.33 -1 3050650..3050799 - 49 62181455 - SC2885 - hypothetical protein 2870 52.27 0 3050802..3052100 - 432 62181456 eno SC2886 - phosphopyruvate hydratase 2871 52.32 0 3052183..3053820 - 545 62181457 pyrG SC2887 - CTP synthetase 2872 52.56 0 3054048..3054848 - 266 62181458 mazG SC2888 - nucleoside triphosphate pyrophosphohydrolase 2873 49.49 0 3055456..3056043 + 195 62181459 stfA SC2889 - putative fimbrial subunit 2874 55.37 0 3056123..3058822 + 899 62181460 steB SC2890 - outer membrane usher protein 2875 54.91 0 3058835..3059608 + 257 62181461 stfD SC2891 - putative periplasmic fimbrial chaperone 2876 55.32 0 3059580..3060134 + 184 62181462 stfE SC2892 - putaive minor fimbrial subunit 2877 50.21 0 3060134..3060619 + 161 62181463 stfF SC2893 - putative minor fimbrial subunit 2878 52.51 0 3060616..3061152 + 178 62181464 yfcP SC2894 - fimbrial subunit 2879 36.73 -2 3061207..3062031 + 274 62181465 - SC2895 - hypothetical protein 2880 55.70 0 3062588..3064822 - 744 62181466 relA SC2896 - GDP/GTP pyrophosphokinase 2881 54.48 0 3064874..3066169 - 431 62181467 rumA SC2897 - 23S rRNA 5-methyluridine methyltransferase 2882 52.59 0 3066226..3068982 + 918 62181468 barA SC2898 - hybrid sensory histidine kinase BarA 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0