version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2736 56.99 0 2917651..2919189 + 512 62181319 emrB SC2749 - MFS superfamily, multidrug transport protein 2737 47.26 0 2919238..2920608 - 456 62181320 - SC2750 - putative glycoporin 2738 30.56 -2 2920753..2920896 + 47 62181321 - SC2751 - hypothetical protein 2739 53.29 0 2920954..2921469 - 171 62181322 luxS SC2752 - S-ribosylhomocysteinase 2740 52.28 0 2921619..2923175 - 518 62181323 gshA SC2753 - glutamate--cysteine ligase 2741 53.76 0 2923252..2923677 - 141 62181324 yqaA SC2754 - putative inner membrane protein 2742 56.44 0 2923674..2924240 - 188 62181325 yqaB SC2755 - fructose-1-phosphatase 2743 51.08 0 2925362..2925547 - 61 62181329 csrA SC2759 - carbon storage regulator 2744 55.04 0 2925783..2928413 - 876 62181330 alaS SC2760 - alanyl-tRNA synthetase 2745 51.30 0 2928649..2929149 - 166 62181331 recX SC2761 - recombination regulator RecX 2746 54.71 0 2929266..2930327 - 353 62181332 recA SC2762 - recombinase A 2747 59.44 +1 2930412..2930909 - 165 62181333 ygaD SC2763 - competence damage-inducible protein A 2748 55.59 0 2931388..2932515 - 375 62181334 mltB SC2764 - murein hydrolase B 2749 50.35 0 2932721..2933284 + 187 62181335 srlA SC2765 - PTS family, glucitol/sorbitol-specific enzyme IIC component,one of two IIC components 2750 58.23 +1 2933281..2934252 + 323 62181336 srlE SC2766 - PTS family, glucitol/sorbitol-specific IIB component, one of two IIC components 2751 58.40 +1 2934264..2934626 + 120 62181337 slrB SC2767 - glucitol/sorbitol-specific PTS system component IIA 2752 54.74 0 2934638..2935417 + 259 62181338 srlD SC2768 - sorbitol-6-phosphate dehydrogenase 2753 55.00 0 2935493..2935852 + 119 62181339 gutM SC2769 - DNA-binding transcriptional activator GutM 2754 50.00 0 2936050..2936823 + 257 62181340 srlR SC2770 - DNA-bindng transcriptional repressor SrlR 2755 56.83 0 2936816..2937781 + 321 62181341 gutQ SC2771 - D-arabinose 5-phosphate isomerase 2756 59.87 +1 2937786..2939300 - 504 62181342 ygaA SC2772 - anaerobic nitric oxide reductase transcription regulator 2757 53.40 0 2939486..2940925 + 479 62181343 norV SC2773 - anaerobic nitric oxide reductase flavorubredoxin 2758 56.35 0 2940922..2942055 + 377 62181344 ygbD SC2774 - nitric oxide reductase 2759 60.11 +1 2942152..2944392 - 746 62181345 hypF SC2775 - hydrogenase maturation protein 2760 56.59 0 2944538..2945083 - 181 62181346 hydN SC2776 - electron transport protein HydN 2761 53.21 0 2945284..2946093 - 269 62181347 - SC2777 - putative periplasmic or exported protein 2762 55.41 0 2946120..2946590 - 156 62181348 hycI SC2778 - hydrogenase 3 maturation protease 2763 56.93 0 2946583..2946993 - 136 62181349 hycH SC2779 - processing of HycE (part of the FHL complex) 2764 59.51 +1 2946990..2947757 - 255 62181350 hycG SC2780 - hydrogenase activity 2765 55.80 0 2947757..2948299 - 180 62181351 hycF SC2781 - formate hydrogenlyase complex iron-sulfur subunit 2766 57.13 0 2948309..2950018 - 569 62181352 hycE SC2782 - formate hydrogenlyase subunit 5 precursor 2767 58.98 +1 2950036..2950959 - 307 62181353 hycD SC2783 - hydrogenase 3, membrane subunit (part of FHL complex) 2768 60.67 +1 2950971..2952788 - 605 62181354 hycC SC2784 - formate hydrogenlyase subunit 3 2769 57.64 0 2952788..2953396 - 202 62181355 hycB SC2785 - hydrogenase-3, iron-sulfur subunit (part of FHL complex) 2770 50.87 0 2953542..2954003 - 153 62181356 hycA SC2786 - formate hydrogenlyase regulatory protein HycA 2771 48.18 0 2954213..2954569 + 118 62181357 hypA SC2787 - hydrogenase nickel incorporation protein 2772 57.39 0 2954638..2955510 + 290 62181358 hypB SC2788 - hydrogenase nickel incorporation protein HypB 2773 55.68 0 2955501..2955773 + 90 62181359 hypC SC2789 - hydrogenase isoenzymes formation protein 2774 57.93 +1 2955773..2956894 + 373 62181360 hypD SC2790 - putative hydrogenase expression/formation protein 2775 59.55 +1 2956891..2957901 + 336 62181361 hypE SC2791 - putative hydrogenase expression/formation protein 2776 54.47 0 2958009..2960198 + 729 62181362 fhlA SC2792 - formate hydrogen-lyase transcriptional activator 2777 53.91 0 2960260..2960604 - 114 62181363 ygbA SC2793 - hypothetical protein 2778 53.59 0 2960786..2961703 + 305 62181364 sitA SC2794 - iron transporter: fur regulated 2779 54.50 0 2961700..2962521 + 273 62181365 sitB SC2795 - iron transporter: fur regulated 2780 54.94 0 2962518..2963378 + 286 62181366 sitC SC2796 - iron transporter: fur regulated 2781 50.77 0 2963369..2964217 + 282 62181367 sitD SC2797 - iron transporter: fur regulated 2782 45.11 -1 2964494..2965249 - 251 62181368 sprB SC2798 - transcriptional regulator 2783 36.94 -2 2965634..2966521 - 295 62181369 hilC SC2799 - AraC family transcription regulator 2784 45.92 -1 2966866..2967318 - 150 62181370 - SC2800 - putative cytoplasmic protein 2785 44.93 -1 2967315..2967995 - 226 62181371 orgB SC2801 - putative flagellar biosynthesis/type III secretory pathway protein 2786 48.19 0 2967952..2968530 - 192 62181372 orgA SC2802 - putative inner membrane protein 2787 45.59 -1 2968523..2969281 - 252 62181373 prgK SC2803 - cell invasion protein; lipoprotein, may link inner and outer membranes 2788 47.39 0 2969278..2969583 - 101 62181374 prgJ SC2804 - cell invasion protein; cytoplasmic 2789 46.09 -1 2969602..2969844 - 80 62181375 prgI SC2805 - cell invasion protein; cytoplasmic 2790 48.87 0 2969869..2971104 - 411 62181376 prgH SC2806 - cell invasion protein 2791 40.86 -1 2971363..2972292 + 309 62181377 hilD SC2807 - regulatory protein 2792 43.14 -1 2973384..2975045 + 553 62181378 hilA SC2808 - invasion protein regulator 2793 40.99 -1 2975063..2975545 + 160 62181379 iagB SC2809 - cell invasion protein 2794 44.36 -1 2975599..2977230 - 543 62181380 sptP SC2810 - protein tyrosine phosphate 2795 39.03 -2 2977217..2977567 - 116 62181381 sicP SC2811 - chaparone, related to virulence 2796 39.08 -2 2977636..2977896 - 86 62181382 - SC2812 - hypothetical protein 2797 38.96 -2 2977940..2978188 - 82 62181383 iacp SC2813 - acyl carrier protein 2798 48.10 0 2978207..2980264 - 685 62181384 sipA SC2814 - cell invasion protein 2799 47.09 0 2980283..2981314 - 343 62181385 sipD SC2815 - cell invasion protein 2800 47.48 0 2981385..2982614 - 409 62181386 sipC SC2816 - cell invasion protein 2801 51.80 0 2982642..2984423 - 593 62181387 sipB SC2817 - cell invasion protein 2802 43.37 -1 2984426..2984923 - 165 62181388 sicA SC2818 - surface presentation of antigens; secretory proteins 2803 43.42 -1 2985061..2986131 - 356 62181389 spaS SC2819 - surface presentation of antigens protein SpaS 2804 50.00 0 2986118..2986909 - 263 62181390 spaR SC2820 - surface presentation of antigens; secretory proteins 2805 46.74 0 2986913..2987173 - 86 62181391 spaQ SC2821 - surface presentation of antigens; secretory proteins 2806 41.93 -1 2987199..2987873 - 224 62181392 spaP SC2822 - surface presentation of antigens protein SpaP 2807 52.96 0 2987863..2988774 - 303 62181393 spaO SC2823 - surface presentation of antigens protein SpaO 2808 49.06 0 2988774..2989784 - 336 62181394 invJ SC2824 - surface presentation of antigens; secretory proteins 2809 43.47 -1 2989784..2990227 - 147 62181395 invI SC2825 - surface presentation of antigens; secretory proteins 2810 54.48 0 2990205..2991500 - 431 62181396 invC SC2826 - ATP synthase SpaL 2811 43.87 -1 2991497..2991904 - 135 62181397 invB SC2827 - surface presentation of antigens; secretory proteins 2812 45.58 -1 2991928..2993985 - 685 62181398 invA SC2828 - invasion protein 2813 45.49 -1 2994010..2995128 - 372 62181399 invE SC2829 - invasion protein 2814 46.24 -1 2995125..2996813 - 562 62181400 invG SC2830 - invasion protein; outer membrane 2815 46.46 0 2996810..2997571 - 253 62181401 invF SC2831 - invasion protein 2816 42.57 -1 2997916..2998359 + 147 62181402 invH SC2832 - invasion protein 2817 48.94 0 2999241..2999522 + 93 62181403 - SC2833 - putative ABC-type transport system 2818 47.16 0 2999519..3000046 + 175 62181404 - SC2834 - putative acetyltransferase 2819 56.50 0 3000119..3000295 - 58 62181405 - SC2835 - putative cytoplasmic protein 2820 41.55 -1 3000672..3001328 + 218 62181406 pphB SC2836 - serine/threonine-specific protein phosphatase 2 2821 48.28 0 3001573..3002067 - 164 62181407 - SC2837 - hypothetical protein 2822 53.66 0 3002094..3002762 - 222 62181408 - SC2838 - hypothetical protein 2823 43.48 -1 3003185..3003322 - 45 62181409 tnpA SC2839 - hypothetical protein 2824 41.61 -1 3003337..3003747 - 136 62181410 - SC2840 - hypothetical protein 2825 57.05 0 3003905..3006472 + 855 62181411 mutS SC2841 - DNA mismatch repair protein 2826 55.64 0 3006528..3006908 - 126 62181412 - SC2842 - hypothetical protein 2827 58.98 +1 3009168..3010664 - 498 62181413 - SC2843 - putative permease 2828 55.94 0 3010661..3011611 - 316 62181414 - SC2844 - putative nucleoside-diphosphate-sugar epimerase 2829 57.27 0 3011651..3012427 - 258 62181415 ygbM SC2845 - hypothetical protein 2830 56.03 0 3012432..3013070 - 212 62181416 ygbL SC2846 - putative aldolase 2831 59.70 +1 3013067..3014329 - 420 62181417 ygbK SC2847 - paral putative tRNA synthase 2832 59.96 +1 3014323..3015246 - 307 62181418 ygbJ SC2848 - 3-hydroxyisobutyrate dehydrogenase 2833 55.69 0 3015443..3016207 + 254 62181419 ygbI SC2849 - DeoR family transcriptional regulator 2834 53.09 0 3016226..3016630 - 134 62181420 hcrR SC2850 - putative transcriptional regulator 2835 57.74 +1 3016801..3017394 + 197 62181421 pad SC2851 - putative flavoprotein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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