version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2675 48.48 0 2843616..2844143 + 175 62181258 smpB SC2688 - SsrA-binding protein 2676 53.94 0 2844757..2845314 + 185 62181259 - SC2689 - large repetitive protein 2677 58.13 +1 2845347..2850350 + 1667 62181260 amyH SC2690 - large repetitive protein 2678 59.36 +1 2850508..2855163 + 1551 62181261 amyH SC2691 - large repetitive protein 2679 56.56 0 2855368..2856228 + 286 62181262 - SC2692 - large repetitive protein 2680 56.88 0 2856293..2857702 + 469 62181263 - SC2693 - putative outer membrane efflux protein 2681 56.63 0 2857699..2859879 + 726 62181264 rtxI SC2694 - putative ABC transporter transmembrane region 2682 53.82 0 2859860..2861050 + 396 62181265 cyaD SC2695 - HlyD family secretion protein 2683 53.33 0 2861269..2861583 - 104 62181266 - SC2696 - hypothetical protein 2684 45.72 -1 2861671..2862009 + 112 62181267 insN SC2697 - transposase insN 2685 51.90 0 2862036..2862875 + 279 62181268 insM SC2698 - hypothetical protein 2686 41.88 -1 2863501..2864460 + 319 62181269 - SC2699 - reverse transcriptase-like protein 2687 40.12 -2 2864363..2865349 + 328 62181270 - SC2700 - hypothetical protein 2688 40.37 -2 2865967..2866506 - 179 62181271 fljA SC2701 - flagellar synthesis: repressor of fliC 2689 46.42 0 2869796..2870368 - 190 62181272 hin SC2702 - H inversion: regulation of flagellar gene expression by site-specific inversion of DNA 2690 44.81 -1 2870772..2870954 + 60 62181273 - SC2703 - hypothetical protein 2691 56.81 0 2871059..2872174 + 371 62181274 iroB SC2704 - putative glycosyl transferase, related to UDP-glucuronosyltransferase 2692 58.68 +1 2872255..2875911 + 1218 62181275 iroC SC2705 - putative ATP binding cassette (ABC) transporter 2693 62.17 +1 2876021..2877265 + 414 62181276 iroD SC2706 - enterochelin esterase 2694 54.06 0 2877297..2878232 + 311 62181277 IroE SC2707 - hypothetical protein 2695 51.08 0 2878274..2880454 - 726 62181278 iroN SC2708 - outer membrane receptor FepA 2696 48.08 0 2880979..2881290 - 103 62181279 - SC2709 - putative inner membrane protein 2697 44.25 -1 2881486..2882538 - 350 62181280 pipB SC2710 - pentapeptide repeat-containing protein 2698 41.59 -1 2882610..2882948 + 112 62181281 - SC2711 - hypothetical protein 2699 45.05 -1 2883057..2883986 + 309 62181282 virK SC2712 - virulence protein VirK 2700 40.23 -2 2884378..2885175 + 265 62181283 mig SC2713 - putative transcription activator 2701 50.30 0 2885896..2886909 - 337 62181284 nxiA SC2714 - putative nickel transporter 2702 56.51 0 2887042..2888508 - 488 62181285 tctE SC2715 - tricarboxylic transport: regulatory protein 2703 55.11 0 2888444..2889118 - 224 62181286 tctD SC2716 - tricarboxylic transport: regulatory protein 2704 40.83 -1 2889157..2889276 + 39 62181287 - SC2717 - hypothetical protein 2705 56.65 0 2889273..2890250 + 325 62181288 tctC SC2718 - tricarboxylic transport 2706 57.47 0 2890262..2890696 + 144 62181289 tctB SC2719 - hypothetical protein 2707 56.96 0 2890707..2892221 + 504 62181290 tctA SC2720 - hypothetical protein 2708 53.99 0 2892524..2893501 + 325 162139554 ygaT SC2721 - hypothetical protein 2709 59.50 +1 2893527..2894795 + 422 62181292 ygaF SC2722 - hypothetical protein 2710 57.76 +1 2894817..2896265 + 482 62181293 gabD SC2723 - succinate-semialdehyde dehydrogenase I 2711 57.71 0 2896280..2897563 + 427 62181294 gabT SC2724 - 4-aminobutyrate aminotransferase 2712 51.53 0 2897693..2899093 + 466 62181295 gabP SC2725 - gamma-aminobutyrate transporter 2713 56.49 0 2899135..2899812 + 225 62181296 ygaE SC2726 - DNA-binding transcriptional regulator CsiR 2714 44.22 -1 2899834..2900283 - 149 62181297 ygaU SC2727 - hypothetical protein 2715 42.77 -1 2900383..2900541 - 52 62181298 yqaE SC2728 - YqaE family transport protein 2716 51.33 0 2900724..2901023 + 99 62181299 ygaV SC2729 - ArsR family regulatory protein 2717 56.63 0 2901033..2901560 + 175 62181300 ygaP SC2730 - hypothetical protein 2718 51.67 0 2901639..2901818 + 59 62181301 - SC2731 - hypothetical protein 2719 46.27 -1 2901908..2902309 - 133 62181302 stpA SC2732 - DNA binding protein, nucleoid-associated 2720 50.22 0 2903008..2903457 + 149 62181303 ygaW SC2733 - hypothetical protein 2721 49.29 0 2903492..2903842 - 116 62181304 ygaC SC2734 - hypothetical protein 2722 54.74 0 2904004..2904330 + 108 62181305 ygaM SC2735 - hypothetical protein 2723 56.93 0 2904414..2905748 - 444 62181306 mocR SC2736 - GntR family transcriptional regulator 2724 51.16 0 2905837..2906268 + 143 62181307 ynjA SC2737 - putative cytoplasmic protein 2725 54.80 0 2906265..2906441 + 58 62181308 - SC2738 - hypothetical protein 2726 53.64 0 2906525..2906785 + 86 62181309 nrdH SC2739 - glutaredoxin-like protein 2727 57.42 0 2906782..2907192 + 136 62181310 nrdI SC2740 - ribonucleotide reductase stimulatory protein 2728 53.94 0 2907165..2909309 + 714 62181311 nrdE SC2741 - ribonucleotide-diphosphate reductase subunit alpha 2729 49.69 0 2909320..2910279 + 319 62181312 nrdF SC2742 - ribonucleotide-diphosphate reductase subunit beta 2730 50.04 0 2910635..2911837 + 400 62181313 proV SC2743 - glycine betaine transporter ATP-binding subunit 2731 59.34 +1 2911830..2912894 + 354 62181314 proW SC2744 - glycine betaine transporter membrane protein 2732 53.71 0 2912964..2913959 + 331 62181315 proX SC2745 - glycine betaine transporter periplasmic subunit 2733 59.24 +1 2914124..2915308 + 394 62181316 ygaY SC2746 - putative inner membrane protein 2734 48.78 0 2915805..2916335 + 176 62181317 emrR SC2747 - transcriptional repressor MprA 2735 54.33 0 2916435..2917634 + 399 62181318 emrA SC2748 - multidrug resistance secretion protein 2736 56.99 0 2917651..2919189 + 512 62181319 emrB SC2749 - MFS superfamily, multidrug transport protein 2737 47.26 0 2919238..2920608 - 456 62181320 - SC2750 - putative glycoporin 2738 30.56 -2 2920753..2920896 + 47 62181321 - SC2751 - hypothetical protein 2739 53.29 0 2920954..2921469 - 171 62181322 luxS SC2752 - S-ribosylhomocysteinase 2740 52.28 0 2921619..2923175 - 518 62181323 gshA SC2753 - glutamate--cysteine ligase 2741 53.76 0 2923252..2923677 - 141 62181324 yqaA SC2754 - putative inner membrane protein 2742 56.44 0 2923674..2924240 - 188 62181325 yqaB SC2755 - fructose-1-phosphatase 2743 51.08 0 2925362..2925547 - 61 62181329 csrA SC2759 - carbon storage regulator 2744 55.04 0 2925783..2928413 - 876 62181330 alaS SC2760 - alanyl-tRNA synthetase 2745 51.30 0 2928649..2929149 - 166 62181331 recX SC2761 - recombination regulator RecX 2746 54.71 0 2929266..2930327 - 353 62181332 recA SC2762 - recombinase A 2747 59.44 +1 2930412..2930909 - 165 62181333 ygaD SC2763 - competence damage-inducible protein A 2748 55.59 0 2931388..2932515 - 375 62181334 mltB SC2764 - murein hydrolase B 2749 50.35 0 2932721..2933284 + 187 62181335 srlA SC2765 - PTS family, glucitol/sorbitol-specific enzyme IIC component,one of two IIC components 2750 58.23 +1 2933281..2934252 + 323 62181336 srlE SC2766 - PTS family, glucitol/sorbitol-specific IIB component, one of two IIC components 2751 58.40 +1 2934264..2934626 + 120 62181337 slrB SC2767 - glucitol/sorbitol-specific PTS system component IIA 2752 54.74 0 2934638..2935417 + 259 62181338 srlD SC2768 - sorbitol-6-phosphate dehydrogenase 2753 55.00 0 2935493..2935852 + 119 62181339 gutM SC2769 - DNA-binding transcriptional activator GutM 2754 50.00 0 2936050..2936823 + 257 62181340 srlR SC2770 - DNA-bindng transcriptional repressor SrlR 2755 56.83 0 2936816..2937781 + 321 62181341 gutQ SC2771 - D-arabinose 5-phosphate isomerase 2756 59.87 +1 2937786..2939300 - 504 62181342 ygaA SC2772 - anaerobic nitric oxide reductase transcription regulator 2757 53.40 0 2939486..2940925 + 479 62181343 norV SC2773 - anaerobic nitric oxide reductase flavorubredoxin 2758 56.35 0 2940922..2942055 + 377 62181344 ygbD SC2774 - nitric oxide reductase 2759 60.11 +1 2942152..2944392 - 746 62181345 hypF SC2775 - hydrogenase maturation protein 2760 56.59 0 2944538..2945083 - 181 62181346 hydN SC2776 - electron transport protein HydN 2761 53.21 0 2945284..2946093 - 269 62181347 - SC2777 - putative periplasmic or exported protein 2762 55.41 0 2946120..2946590 - 156 62181348 hycI SC2778 - hydrogenase 3 maturation protease 2763 56.93 0 2946583..2946993 - 136 62181349 hycH SC2779 - processing of HycE (part of the FHL complex) 2764 59.51 +1 2946990..2947757 - 255 62181350 hycG SC2780 - hydrogenase activity 2765 55.80 0 2947757..2948299 - 180 62181351 hycF SC2781 - formate hydrogenlyase complex iron-sulfur subunit 2766 57.13 0 2948309..2950018 - 569 62181352 hycE SC2782 - formate hydrogenlyase subunit 5 precursor 2767 58.98 +1 2950036..2950959 - 307 62181353 hycD SC2783 - hydrogenase 3, membrane subunit (part of FHL complex) 2768 60.67 +1 2950971..2952788 - 605 62181354 hycC SC2784 - formate hydrogenlyase subunit 3 2769 57.64 0 2952788..2953396 - 202 62181355 hycB SC2785 - hydrogenase-3, iron-sulfur subunit (part of FHL complex) 2770 50.87 0 2953542..2954003 - 153 62181356 hycA SC2786 - formate hydrogenlyase regulatory protein HycA 2771 48.18 0 2954213..2954569 + 118 62181357 hypA SC2787 - hydrogenase nickel incorporation protein 2772 57.39 0 2954638..2955510 + 290 62181358 hypB SC2788 - hydrogenase nickel incorporation protein HypB 2773 55.68 0 2955501..2955773 + 90 62181359 hypC SC2789 - hydrogenase isoenzymes formation protein 2774 57.93 +1 2955773..2956894 + 373 62181360 hypD SC2790 - putative hydrogenase expression/formation protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0