version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2633 53.00 0 2795970..2796686 - 238 62181214 rseA SC2644 - anti-RNA polymerase sigma factor SigE 2634 50.87 0 2796652..2797227 - 191 62181215 rpoE SC2645 - RNA polymerase sigma factor RpoE 2635 55.64 0 2797652..2799274 + 540 62181216 nadB SC2646 - L-aspartate oxidase 2636 52.78 0 2799205..2800068 - 287 62181217 yfiC SC2647 - hypothetical protein 2637 54.38 0 2800126..2801460 + 444 62181218 srmB SC2648 - ATP-dependent RNA helicase SrmB 2638 50.69 0 2801478..2802422 - 314 62181219 yfiE SC2649 - LysR family transcriptional regulator 2639 51.53 0 2802480..2803067 + 195 62181220 yfiK SC2650 - neutral amino-acid efflux protein 2640 50.00 0 2803129..2803512 - 127 62181221 yfiD SC2651 - autonomous glycyl radical cofactor GrcA 2641 55.07 0 2803831..2804520 + 229 62181222 ung SC2652 - uracil-DNA glycosylase 2642 56.84 0 2804636..2805673 - 345 62181223 yfiF SC2653 - putative methyltransferase 2643 53.33 0 2805877..2806296 + 139 62181224 trxC SC2654 - thioredoxin 2 2644 54.63 0 2806369..2807049 + 226 62181225 yfiP SC2655 - putative cytoplasmic protein 2645 55.62 0 2807103..2809763 + 886 62181226 yfiQ SC2656 - putative acetyl-CoA synthetase 2646 49.45 0 2809875..2811233 + 452 62181227 pssA SC2657 - phosphatidylserine synthase 2647 54.94 0 2811278..2811601 + 107 62181228 yfiM SC2658 - hypothetical protein 2648 52.00 0 2811598..2812899 - 433 62181229 kgtP SC2659 - alpha-ketoglutarate transporter 2649 49.34 0 2813003..2813458 - 151 62181230 - SC2660 - hypothetical protein 2650 53.34 0 2819353..2821926 - 857 62181233 clpB SC2663 - protein disaggregation chaperone 2651 54.23 0 2822056..2822787 - 243 62181234 yfiH SC2664 - hypothetical protein 2652 53.31 0 2822784..2823764 - 326 62181235 rluD SC2665 - 23S rRNA pseudouridine synthase D 2653 52.17 0 2823896..2824633 + 245 62181236 yfiO SC2666 - outer membrane protein assembly complex subunit YfiO 2654 44.23 -1 2824608..2824763 + 51 62181237 - SC2667 - hypothetical protein 2655 47.20 0 2824905..2825243 + 112 62181238 yfiA SC2668 - translation inhibitor protein RaiA 2656 54.18 0 2825494..2826654 + 386 62181239 pheA SC2669 - bifunctional chorismate mutase/prephenate dehydratase 2657 54.02 0 2826615..2827523 - 302 62181240 yvrE SC2670 - hypothetical protein 2658 54.99 0 2827581..2828702 - 373 62181241 tyrA SC2671 - bifunctional chorismate mutase/prephenate dehydrogenase 2659 53.03 0 2828712..2829782 - 356 62181242 aroF SC2672 - phospho-2-dehydro-3-deoxyheptonate aldolase 2660 46.24 -1 2830222..2830740 + 172 62181243 yfiR SC2673 - hypothetical protein 2661 48.85 0 2832110..2832457 - 115 62181244 rplS SC2674 - 50S ribosomal protein L19 2662 53.52 0 2832498..2833265 - 255 62181245 trmD SC2675 - tRNA (guanine-N(1)-)-methyltransferase 2663 49.91 0 2833310..2833858 - 182 162139559 rimM SC2676 - 16S rRNA-processing protein 2664 52.21 0 2833877..2834125 - 82 162139558 rpsP SC2677 - 30S ribosomal protein S16 2665 55.07 0 2834378..2835739 - 453 62181248 ffh SC2678 - signal recognition particle protein 2666 51.66 0 2835765..2836697 + 310 62181249 corE SC2679 - putative cytochrome c-type biogenesis protein (heme exporter protein C 2667 53.13 0 2836807..2838003 + 398 162139557 yfjD SC2680 - hypothetical protein 2668 43.89 -1 2838124..2838729 + 201 62181251 - SC2681 - putative cytoplasmic protein 2669 52.45 0 2838764..2839354 - 196 162139555 grpE SC2683 - heat shock protein GrpE 2670 50.63 0 2839478..2840356 + 292 162139556 ppnK SC2682 - inorganic polyphosphate/ATP-NAD kinase 2671 54.57 0 2840442..2842103 + 553 62181254 recN SC2684 - recombination and repair protein 2672 51.62 0 2842252..2842590 + 112 62181255 smpA SC2685 - hypothetical protein 2673 53.61 0 2842756..2843046 - 96 62181256 yfjF SC2686 - hypothetical protein 2674 49.69 0 2843036..2843512 - 158 62181257 yfjG SC2687 - hypothetical protein 2675 48.48 0 2843616..2844143 + 175 62181258 smpB SC2688 - SsrA-binding protein 2676 53.94 0 2844757..2845314 + 185 62181259 - SC2689 - large repetitive protein 2677 58.13 +1 2845347..2850350 + 1667 62181260 amyH SC2690 - large repetitive protein 2678 59.36 +1 2850508..2855163 + 1551 62181261 amyH SC2691 - large repetitive protein 2679 56.56 0 2855368..2856228 + 286 62181262 - SC2692 - large repetitive protein 2680 56.88 0 2856293..2857702 + 469 62181263 - SC2693 - putative outer membrane efflux protein 2681 56.63 0 2857699..2859879 + 726 62181264 rtxI SC2694 - putative ABC transporter transmembrane region 2682 53.82 0 2859860..2861050 + 396 62181265 cyaD SC2695 - HlyD family secretion protein 2683 53.33 0 2861269..2861583 - 104 62181266 - SC2696 - hypothetical protein 2684 45.72 -1 2861671..2862009 + 112 62181267 insN SC2697 - transposase insN 2685 51.90 0 2862036..2862875 + 279 62181268 insM SC2698 - hypothetical protein 2686 41.88 -1 2863501..2864460 + 319 62181269 - SC2699 - reverse transcriptase-like protein 2687 40.12 -2 2864363..2865349 + 328 62181270 - SC2700 - hypothetical protein 2688 40.37 -2 2865967..2866506 - 179 62181271 fljA SC2701 - flagellar synthesis: repressor of fliC 2689 46.42 0 2869796..2870368 - 190 62181272 hin SC2702 - H inversion: regulation of flagellar gene expression by site-specific inversion of DNA 2690 44.81 -1 2870772..2870954 + 60 62181273 - SC2703 - hypothetical protein 2691 56.81 0 2871059..2872174 + 371 62181274 iroB SC2704 - putative glycosyl transferase, related to UDP-glucuronosyltransferase 2692 58.68 +1 2872255..2875911 + 1218 62181275 iroC SC2705 - putative ATP binding cassette (ABC) transporter 2693 62.17 +1 2876021..2877265 + 414 62181276 iroD SC2706 - enterochelin esterase 2694 54.06 0 2877297..2878232 + 311 62181277 IroE SC2707 - hypothetical protein 2695 51.08 0 2878274..2880454 - 726 62181278 iroN SC2708 - outer membrane receptor FepA 2696 48.08 0 2880979..2881290 - 103 62181279 - SC2709 - putative inner membrane protein 2697 44.25 -1 2881486..2882538 - 350 62181280 pipB SC2710 - pentapeptide repeat-containing protein 2698 41.59 -1 2882610..2882948 + 112 62181281 - SC2711 - hypothetical protein 2699 45.05 -1 2883057..2883986 + 309 62181282 virK SC2712 - virulence protein VirK 2700 40.23 -2 2884378..2885175 + 265 62181283 mig SC2713 - putative transcription activator 2701 50.30 0 2885896..2886909 - 337 62181284 nxiA SC2714 - putative nickel transporter 2702 56.51 0 2887042..2888508 - 488 62181285 tctE SC2715 - tricarboxylic transport: regulatory protein 2703 55.11 0 2888444..2889118 - 224 62181286 tctD SC2716 - tricarboxylic transport: regulatory protein 2704 40.83 -1 2889157..2889276 + 39 62181287 - SC2717 - hypothetical protein 2705 56.65 0 2889273..2890250 + 325 62181288 tctC SC2718 - tricarboxylic transport 2706 57.47 0 2890262..2890696 + 144 62181289 tctB SC2719 - hypothetical protein 2707 56.96 0 2890707..2892221 + 504 62181290 tctA SC2720 - hypothetical protein 2708 53.99 0 2892524..2893501 + 325 162139554 ygaT SC2721 - hypothetical protein 2709 59.50 +1 2893527..2894795 + 422 62181292 ygaF SC2722 - hypothetical protein 2710 57.76 +1 2894817..2896265 + 482 62181293 gabD SC2723 - succinate-semialdehyde dehydrogenase I 2711 57.71 0 2896280..2897563 + 427 62181294 gabT SC2724 - 4-aminobutyrate aminotransferase 2712 51.53 0 2897693..2899093 + 466 62181295 gabP SC2725 - gamma-aminobutyrate transporter 2713 56.49 0 2899135..2899812 + 225 62181296 ygaE SC2726 - DNA-binding transcriptional regulator CsiR 2714 44.22 -1 2899834..2900283 - 149 62181297 ygaU SC2727 - hypothetical protein 2715 42.77 -1 2900383..2900541 - 52 62181298 yqaE SC2728 - YqaE family transport protein 2716 51.33 0 2900724..2901023 + 99 62181299 ygaV SC2729 - ArsR family regulatory protein 2717 56.63 0 2901033..2901560 + 175 62181300 ygaP SC2730 - hypothetical protein 2718 51.67 0 2901639..2901818 + 59 62181301 - SC2731 - hypothetical protein 2719 46.27 -1 2901908..2902309 - 133 62181302 stpA SC2732 - DNA binding protein, nucleoid-associated 2720 50.22 0 2903008..2903457 + 149 62181303 ygaW SC2733 - hypothetical protein 2721 49.29 0 2903492..2903842 - 116 62181304 ygaC SC2734 - hypothetical protein 2722 54.74 0 2904004..2904330 + 108 62181305 ygaM SC2735 - hypothetical protein 2723 56.93 0 2904414..2905748 - 444 62181306 mocR SC2736 - GntR family transcriptional regulator 2724 51.16 0 2905837..2906268 + 143 62181307 ynjA SC2737 - putative cytoplasmic protein 2725 54.80 0 2906265..2906441 + 58 62181308 - SC2738 - hypothetical protein 2726 53.64 0 2906525..2906785 + 86 62181309 nrdH SC2739 - glutaredoxin-like protein 2727 57.42 0 2906782..2907192 + 136 62181310 nrdI SC2740 - ribonucleotide reductase stimulatory protein 2728 53.94 0 2907165..2909309 + 714 62181311 nrdE SC2741 - ribonucleotide-diphosphate reductase subunit alpha 2729 49.69 0 2909320..2910279 + 319 62181312 nrdF SC2742 - ribonucleotide-diphosphate reductase subunit beta 2730 50.04 0 2910635..2911837 + 400 62181313 proV SC2743 - glycine betaine transporter ATP-binding subunit 2731 59.34 +1 2911830..2912894 + 354 62181314 proW SC2744 - glycine betaine transporter membrane protein 2732 53.71 0 2912964..2913959 + 331 62181315 proX SC2745 - glycine betaine transporter periplasmic subunit 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0