version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2597 54.52 0 2770358..2770966 - 202 62181178 - SC2608 - putative bacteriophage protein 2598 56.26 0 2770980..2772449 - 489 62181179 - SC2609 - hypothetical protein 2599 54.78 0 2772449..2774071 - 540 62181180 - SC2610 - hypothetical protein 2600 50.60 0 2774074..2774652 - 192 62181181 - SC2611 - hypothetical protein 2601 48.19 0 2774766..2775290 - 174 62181182 - SC2612 - hypothetical protein 2602 51.78 0 2775508..2775957 - 149 62181183 enpP SC2613 - hypothetical protein 2603 53.20 0 2775975..2776427 - 150 62181184 lycV SC2614 - Gifsy-2 prophage lysozyme 2604 51.19 0 2776411..2776746 - 111 62181185 - SC2615 - Gifsy-1 prophage protein 2605 42.79 -1 2777016..2777702 + 228 62181186 gtgA SC2616 - hypothetical protein 2606 54.22 0 2778063..2778512 + 149 62181187 - SC2617 - Gifsy-2 prophage protein 2607 42.86 -1 2778648..2778773 - 41 62181188 - SC2618 - Gifsy-2 prophage protein 2608 46.37 0 2779172..2779969 - 265 62181189 req SC2619 - Gifsy-2 prophage putative molecular chaperone 2609 58.82 +1 2780102..2780713 - 203 62181190 ninG SC2620 - Gifsy-1 prophage NinG 2610 51.74 0 2780716..2780916 - 66 62181191 - SC2621 - hypothetical protein 2611 52.57 0 2780922..2781524 - 200 62181192 - SC2622 - Gifsy-2 prophage protein 2612 42.17 -1 2781559..2781807 - 82 62181193 - SC2623 - putative bacteriophage protein 2613 45.30 -1 2781924..2782157 - 77 62181194 dinI SC2624 - Gifsy-1 prophage DinI 2614 52.81 0 2782312..2782578 - 88 62181195 - SC2625 - putative bacteriophage protein 2615 53.55 0 2782672..2782953 - 93 62181196 - SC2626 - hypothetical protein 2616 46.51 0 2782964..2783221 - 85 62181197 - SC2627 - hypothetical protein 2617 53.41 0 2783224..2783487 - 87 62181198 ead SC2628 - Ead protein 2618 46.59 0 2783575..2783838 - 87 62181199 - SC2629 - hypothetical protein 2619 53.45 0 2783835..2784182 - 115 62181200 - SC2630 - putative DNA-binding protein 2620 52.93 0 2784193..2784942 - 249 62181201 dnaC SC2631 - putative replication protein 2621 47.15 0 2784945..2785928 - 327 62181202 prpO SC2632 - Gifsy-1 prophage PrpO 2622 52.55 0 2786013..2786444 - 143 62181203 - SC2633 - Gifsy-1 prophage cI protein 2623 46.19 -1 2786704..2787123 + 139 62181204 - SC2634 - putative DNA-binding protein 2624 54.70 0 2787413..2787529 + 38 62181205 - SC2635 - Gifsy-1 prophage protein 2625 45.91 -1 2787522..2787680 + 52 62181206 - SC2636 - Gifsy-1 prophage protein 2626 38.75 -2 2787702..2788052 + 116 62181207 - SC2637 - Gifsy-1 prophage protein 2627 53.18 0 2788179..2791106 + 975 62181208 recE SC2638 - Gifsy-1 prophage RecE 2628 51.89 0 2791117..2792226 + 369 62181209 - SC2639 - Gifsy-2 prophage protein 2629 52.08 0 2792269..2792508 + 79 62181210 - SC2640 - putative cytoplasmic protein 2630 49.17 0 2792811..2793713 - 300 62181211 int SC2641 - Gifsy-1 prophage Int 2631 58.54 +1 2794538..2795017 - 159 62181212 rseC SC2642 - SoxR reducing system protein RseC 2632 54.96 0 2795014..2795970 - 318 62181213 rseB SC2643 - periplasmic negative regulator of sigmaE 2633 53.00 0 2795970..2796686 - 238 62181214 rseA SC2644 - anti-RNA polymerase sigma factor SigE 2634 50.87 0 2796652..2797227 - 191 62181215 rpoE SC2645 - RNA polymerase sigma factor RpoE 2635 55.64 0 2797652..2799274 + 540 62181216 nadB SC2646 - L-aspartate oxidase 2636 52.78 0 2799205..2800068 - 287 62181217 yfiC SC2647 - hypothetical protein 2637 54.38 0 2800126..2801460 + 444 62181218 srmB SC2648 - ATP-dependent RNA helicase SrmB 2638 50.69 0 2801478..2802422 - 314 62181219 yfiE SC2649 - LysR family transcriptional regulator 2639 51.53 0 2802480..2803067 + 195 62181220 yfiK SC2650 - neutral amino-acid efflux protein 2640 50.00 0 2803129..2803512 - 127 62181221 yfiD SC2651 - autonomous glycyl radical cofactor GrcA 2641 55.07 0 2803831..2804520 + 229 62181222 ung SC2652 - uracil-DNA glycosylase 2642 56.84 0 2804636..2805673 - 345 62181223 yfiF SC2653 - putative methyltransferase 2643 53.33 0 2805877..2806296 + 139 62181224 trxC SC2654 - thioredoxin 2 2644 54.63 0 2806369..2807049 + 226 62181225 yfiP SC2655 - putative cytoplasmic protein 2645 55.62 0 2807103..2809763 + 886 62181226 yfiQ SC2656 - putative acetyl-CoA synthetase 2646 49.45 0 2809875..2811233 + 452 62181227 pssA SC2657 - phosphatidylserine synthase 2647 54.94 0 2811278..2811601 + 107 62181228 yfiM SC2658 - hypothetical protein 2648 52.00 0 2811598..2812899 - 433 62181229 kgtP SC2659 - alpha-ketoglutarate transporter 2649 49.34 0 2813003..2813458 - 151 62181230 - SC2660 - hypothetical protein 2650 53.34 0 2819353..2821926 - 857 62181233 clpB SC2663 - protein disaggregation chaperone 2651 54.23 0 2822056..2822787 - 243 62181234 yfiH SC2664 - hypothetical protein 2652 53.31 0 2822784..2823764 - 326 62181235 rluD SC2665 - 23S rRNA pseudouridine synthase D 2653 52.17 0 2823896..2824633 + 245 62181236 yfiO SC2666 - outer membrane protein assembly complex subunit YfiO 2654 44.23 -1 2824608..2824763 + 51 62181237 - SC2667 - hypothetical protein 2655 47.20 0 2824905..2825243 + 112 62181238 yfiA SC2668 - translation inhibitor protein RaiA 2656 54.18 0 2825494..2826654 + 386 62181239 pheA SC2669 - bifunctional chorismate mutase/prephenate dehydratase 2657 54.02 0 2826615..2827523 - 302 62181240 yvrE SC2670 - hypothetical protein 2658 54.99 0 2827581..2828702 - 373 62181241 tyrA SC2671 - bifunctional chorismate mutase/prephenate dehydrogenase 2659 53.03 0 2828712..2829782 - 356 62181242 aroF SC2672 - phospho-2-dehydro-3-deoxyheptonate aldolase 2660 46.24 -1 2830222..2830740 + 172 62181243 yfiR SC2673 - hypothetical protein 2661 48.85 0 2832110..2832457 - 115 62181244 rplS SC2674 - 50S ribosomal protein L19 2662 53.52 0 2832498..2833265 - 255 62181245 trmD SC2675 - tRNA (guanine-N(1)-)-methyltransferase 2663 49.91 0 2833310..2833858 - 182 162139559 rimM SC2676 - 16S rRNA-processing protein 2664 52.21 0 2833877..2834125 - 82 162139558 rpsP SC2677 - 30S ribosomal protein S16 2665 55.07 0 2834378..2835739 - 453 62181248 ffh SC2678 - signal recognition particle protein 2666 51.66 0 2835765..2836697 + 310 62181249 corE SC2679 - putative cytochrome c-type biogenesis protein (heme exporter protein C 2667 53.13 0 2836807..2838003 + 398 162139557 yfjD SC2680 - hypothetical protein 2668 43.89 -1 2838124..2838729 + 201 62181251 - SC2681 - putative cytoplasmic protein 2669 52.45 0 2838764..2839354 - 196 162139555 grpE SC2683 - heat shock protein GrpE 2670 50.63 0 2839478..2840356 + 292 162139556 ppnK SC2682 - inorganic polyphosphate/ATP-NAD kinase 2671 54.57 0 2840442..2842103 + 553 62181254 recN SC2684 - recombination and repair protein 2672 51.62 0 2842252..2842590 + 112 62181255 smpA SC2685 - hypothetical protein 2673 53.61 0 2842756..2843046 - 96 62181256 yfjF SC2686 - hypothetical protein 2674 49.69 0 2843036..2843512 - 158 62181257 yfjG SC2687 - hypothetical protein 2675 48.48 0 2843616..2844143 + 175 62181258 smpB SC2688 - SsrA-binding protein 2676 53.94 0 2844757..2845314 + 185 62181259 - SC2689 - large repetitive protein 2677 58.13 +1 2845347..2850350 + 1667 62181260 amyH SC2690 - large repetitive protein 2678 59.36 +1 2850508..2855163 + 1551 62181261 amyH SC2691 - large repetitive protein 2679 56.56 0 2855368..2856228 + 286 62181262 - SC2692 - large repetitive protein 2680 56.88 0 2856293..2857702 + 469 62181263 - SC2693 - putative outer membrane efflux protein 2681 56.63 0 2857699..2859879 + 726 62181264 rtxI SC2694 - putative ABC transporter transmembrane region 2682 53.82 0 2859860..2861050 + 396 62181265 cyaD SC2695 - HlyD family secretion protein 2683 53.33 0 2861269..2861583 - 104 62181266 - SC2696 - hypothetical protein 2684 45.72 -1 2861671..2862009 + 112 62181267 insN SC2697 - transposase insN 2685 51.90 0 2862036..2862875 + 279 62181268 insM SC2698 - hypothetical protein 2686 41.88 -1 2863501..2864460 + 319 62181269 - SC2699 - reverse transcriptase-like protein 2687 40.12 -2 2864363..2865349 + 328 62181270 - SC2700 - hypothetical protein 2688 40.37 -2 2865967..2866506 - 179 62181271 fljA SC2701 - flagellar synthesis: repressor of fliC 2689 46.42 0 2869796..2870368 - 190 62181272 hin SC2702 - H inversion: regulation of flagellar gene expression by site-specific inversion of DNA 2690 44.81 -1 2870772..2870954 + 60 62181273 - SC2703 - hypothetical protein 2691 56.81 0 2871059..2872174 + 371 62181274 iroB SC2704 - putative glycosyl transferase, related to UDP-glucuronosyltransferase 2692 58.68 +1 2872255..2875911 + 1218 62181275 iroC SC2705 - putative ATP binding cassette (ABC) transporter 2693 62.17 +1 2876021..2877265 + 414 62181276 iroD SC2706 - enterochelin esterase 2694 54.06 0 2877297..2878232 + 311 62181277 IroE SC2707 - hypothetical protein 2695 51.08 0 2878274..2880454 - 726 62181278 iroN SC2708 - outer membrane receptor FepA 2696 48.08 0 2880979..2881290 - 103 62181279 - SC2709 - putative inner membrane protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0