version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 213 53.82 0 245402..246226 - 274 62178783 dapD SC0213 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 214 55.97 0 246256..248928 - 890 62178784 glnD SC0214 - PII uridylyl-transferase 215 52.70 0 249041..249835 - 264 62178785 map SC0215 - methionine aminopeptidase 216 51.24 0 250286..251011 + 241 62178786 rpsB SC0216 - 30S ribosomal protein S2 217 52.46 0 251269..252120 + 283 162139616 tsf SC0217 - elongation factor Ts 218 53.72 0 252265..252990 + 241 62178788 pyrH SC0218 - uridylate kinase 219 51.08 0 253137..253694 + 185 62178789 frr SC0219 - ribosome recycling factor 220 56.14 0 253894..255033 + 379 62178790 dxr SC0220 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 221 51.12 0 255346..256104 + 252 62178791 uppS SC0221 - undecaprenyl pyrophosphate synthase 222 52.68 0 256117..256974 + 285 162139615 cdsA SC0222 - CDP-diglyceride synthase 223 53.07 0 256986..258338 + 450 62178793 yaeL SC0223 - zinc metallopeptidase 224 52.48 0 258370..260787 + 805 62178794 yaeT SC0224 - outer membrane protein assembly factor YaeT 225 47.53 0 260910..261395 + 161 62178795 hlpA SC0225 - periplasmic chaperone 226 52.14 0 261399..262424 + 341 62178796 lpxD SC0226 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 227 50.55 0 262440..262985 + 181 62178797 fabZ SC0227 - (3R)-hydroxymyristoyl-ACP dehydratase 228 53.49 0 262989..263777 + 262 62178798 lpxA SC0228 - UDP-N-acetylglucosamine acyltransferase 229 55.87 0 263777..264925 + 382 62178799 lpxB SC0229 - lipid-A-disaccharide synthase 230 55.95 0 264922..265518 + 198 62178800 rnhB SC0230 - ribonuclease HII 231 56.01 0 265542..269024 + 1160 62178801 dnaE SC0231 - DNA polymerase III subunit alpha 232 54.90 0 269037..269996 + 319 62178802 accA SC0232 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 233 55.27 0 270177..271940 + 587 62178803 chi2 SC0233 - putative endochitinase 234 52.01 0 272016..274157 + 713 62178804 ldcC SC0234 - lysine decarboxylase 2, constitutive 235 52.31 0 274213..274602 + 129 62178805 yaeR SC0235 - hypothetical protein 236 59.09 +1 274665..275957 + 430 62178806 tilS SC0236 - tRNA(Ile)-lysidine synthetase 237 44.06 -1 276041..276301 - 86 62178807 rof SC0237 - Rho-binding antiterminator 238 49.75 0 276288..276488 - 66 62178808 yaeP SC0238 - hypothetical protein 239 55.49 0 276686..277231 + 181 62178809 yaeQ SC0239 - hypothetical protein 240 55.32 0 277228..277650 + 140 62178810 yaeJ SC0240 - hypothetical protein 241 54.68 0 278453..280171 - 572 162139614 proS SC0241 - prolyl-tRNA synthetase 242 55.23 0 280282..280989 - 235 62178812 yaeB SC0242 - hypothetical protein 243 54.57 0 280986..281390 - 134 62178813 rcsF SC0243 - outer membrane lipoprotein 244 48.90 0 281509..282324 - 271 62178814 metQ SC0244 - DL-methionine transporter substrate-binding subunit 245 53.82 0 282363..283016 - 217 62178815 yaeE SC0245 - DL-methionine transporter permease subunit 246 52.71 0 283009..284040 - 343 162139613 metN SC0246 - DL-methionine transporter ATP-binding subunit 247 51.55 0 284230..284811 + 193 62178817 yaeD SC0247 - D,D-heptose 1,7-bisphosphate phosphatase 248 50.50 0 290977..291780 + 267 62178821 dkgB SC0251 - 2,5-diketo-D-gluconate reductase B 249 51.69 0 291802..292716 - 304 62178822 yafC SC0252 - LysR family transcriptional regulator 250 55.78 0 292821..293996 + 391 62178823 ydhP SC0253 - putative drug efflux protein (perhaps for chloramphenicol) 251 53.18 0 294128..294928 + 266 62178824 yafD SC0254 - hypothetical protein 252 52.01 0 295006..295776 + 256 62178825 yafE SC0255 - putative methyltransferase in menaquinone/biotin biosynthesis 253 51.97 0 295832..297199 - 455 62178826 dniR SC0256 - membrane-bound lytic murein transglycosylase D 254 43.65 -1 297271..298026 - 251 62178827 gloB SC0257 - hydroxyacylglutathione hydrolase 255 51.04 0 298061..298783 + 240 62178828 yafS SC0258 - hypothetical protein 256 50.21 0 298780..299247 - 155 162139612 rnhA SC0259 - ribonuclease H 257 51.69 0 299302..300042 + 246 62178830 dnaQ SC0260 - DNA polymerase III subunit epsilon 258 61.65 +1 300574..301629 - 351 62178831 - SC0261 - putative cytoplasmic protein 259 60.14 +1 301640..302635 - 331 62178832 - SC0262 - putative cytoplasmic protein 260 59.82 +1 302632..304515 - 627 62178833 - SC0263 - putative cytoplasmic protein 261 55.96 0 304531..305025 - 164 62178834 - SC0264 - putative cytoplasmic protein 262 60.53 +1 305022..305771 - 249 62178835 - SC0265 - putative cytoplasmic protein 263 52.16 0 305833..306735 - 300 62178836 - SC0266 - putative cytoplasmic protein 264 22.22 -2 306744..306815 - 23 62178837 - SC0267 - hypothetical protein 265 55.25 0 309841..310383 + 180 62178838 - SC0268 - putative cytoplasmic protein 266 54.80 0 310407..311915 + 502 62178839 sirA SC0269 - putative cytoplasmic protein 267 43.15 -1 311982..312368 + 128 62178840 - SC0270 - hypothetical protein 268 43.85 -1 312381..312827 + 148 62178841 - SC0271 - putative cytoplasmic protein 269 51.44 0 313079..313564 + 161 62178842 - SC0272 - putative cytoplasmic protein 270 53.07 0 313631..314167 + 178 62178843 - SC0273 - putative outer membrane lipoprotein 271 58.18 +1 314171..315514 + 447 62178844 - SC0274 - putative cytoplasmic protein 272 59.46 +1 315511..316815 + 434 62178845 - SC0275 - hypothetical protein 273 41.86 -1 316820..317593 + 257 62178846 - SC0276 - putative inner membrane protein 274 33.33 -2 317783..318226 + 147 62178847 - SC0277 - putative shiga-like toxin A subunit 275 61.89 +1 318260..322129 + 1289 62178848 - SC0278 - putative inner membrane protein 276 65.02 +2 322129..322917 + 262 62178849 - SC0279 - putative cytoplasmic protein 277 48.44 0 322914..323330 + 138 62178850 - SC0280 - putative periplasmic protein 278 47.70 0 323354..323875 + 173 62178851 - SC0281 - putative cytoplasmic protein 279 55.21 0 324271..326505 + 744 62178852 - SC0282 - Rhs-family protein 280 49.70 0 326517..327023 + 168 62178853 - SC0283 - hypothetical protein 281 59.95 +1 327039..331820 + 1593 62178854 rhs SC0284 - Rhs-family protein 282 28.16 -2 331839..332147 + 102 62178855 - SC0285 - hypothetical protein 283 55.04 0 332206..332463 - 85 62178856 yjiW SC0286 - hypothetical protein 284 29.70 -2 333900..334367 + 155 62178857 - SC0287 - hypothetical protein 285 31.64 -2 334610..334963 + 117 62178858 - SC0288 - putative cytoplasmic protein 286 48.57 0 335030..335344 - 104 62178859 - SC0289 - putative cytoplasmic protein 287 52.48 0 335477..335617 - 46 62178860 - SC0290 - hypothetical protein 288 45.04 -1 335820..336101 + 93 62178861 - SC0291 - integrase core subunit 289 43.47 -1 336851..337363 + 170 62178862 safA SC0292 - putative outer membrane protein 290 47.83 0 337447..338184 + 245 62178863 safB SC0293 - putative fimbriae assembly chaparone 291 54.36 0 338208..340718 + 836 62178864 safC SC0294 - putative fimbriae usher 292 53.72 0 340740..341210 + 156 62178865 safD SC0295 - putative fimbriae subunit 293 51.70 0 341618..342439 + 273 62178866 ybeJ SC0296 - putative xylanase/chitin deacetylase 294 39.45 -2 343256..344203 + 315 62178867 sinR SC0297 - transcriptional regulator 295 46.43 0 344236..344487 - 83 62178868 - SC0298 - hypothetical protein 296 53.18 0 344862..345128 - 88 62178869 istB SC0299 - hypothetical protein 297 48.24 0 346343..347053 + 236 62178870 tcfA SC0300 - putative fimbrial protein 298 47.05 0 347104..347679 + 191 62178871 tcfB SC0301 - putative fimbrial subunit 299 45.24 -1 350498..351043 + 181 62178872 tcfD SC0302 - putative fimbrail protein 300 49.55 0 351028..351588 + 186 62178873 tcfD SC0303 - putative fimbrail protein 301 33.12 -2 351703..352176 + 157 62178874 tinR SC0304 - transcriptional regulator 302 34.30 -2 352316..352933 + 205 62178875 TioA SC0305 - hypothetical protein 303 47.06 0 353699..353851 - 50 62178876 - SC0306 - hypothetical protein 304 42.64 -1 353897..354616 - 239 62178877 sapA SC0307 - sapA-like protein 305 47.06 0 354962..355369 - 135 62178878 virG SC0308 - hypothetical protein 306 54.17 0 355679..356446 - 255 62178879 yafV SC0309 - hypothetical protein 307 55.95 0 356555..358999 - 814 62178880 fadE SC0310 - acyl-CoA dehydrogenase 308 48.01 0 359239..359817 + 192 62178881 gmhA SC0311 - phosphoheptose isomerase 309 51.30 0 360030..360797 + 255 62178882 yafJ SC0312 - hypothetical protein 310 48.08 0 360768..361391 - 207 62178883 yafK SC0313 - hypothetical protein 311 51.80 0 361755..362810 + 351 62178884 dinP SC0314 - DNA polymerase IV 312 57.28 0 363029..364168 + 379 162139611 ykfJ SC0315 - hypothetical protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0