version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2222 52.42 0 2341884..2342978 + 364 62180803 yejB SC2233 - putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component 2223 55.46 0 2342978..2344003 + 341 62180804 yejE SC2234 - putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component 2224 56.73 0 2344005..2345594 + 529 62180805 yejF SC2235 - ABC transporter ATPase 2225 52.75 0 2345598..2345942 - 114 62180806 yejG SC2236 - hypothetical protein 2226 62.63 +1 2346238..2346336 - 32 62180807 - SC2237 - hypothetical protein 2227 54.16 0 2346333..2347523 - 396 62180808 bcr SC2238 - bicyclomycin/multidrug efflux system 2228 54.02 0 2347551..2348246 - 231 62180809 rsuA SC2239 - 16S rRNA pseudouridylate synthase A 2229 57.07 0 2348398..2350158 + 586 62180810 yejH SC2240 - putative ATP-dependent helicase 2230 51.23 0 2350283..2350567 + 94 62180811 rplY SC2241 - 50S ribosomal protein L25 2231 43.80 -1 2350676..2351296 - 206 62180812 - SC2242 - putative inner membrane protein 2232 53.87 0 2351324..2352331 - 335 62180813 yejK SC2243 - nucleoid-associated protein NdpA 2233 52.63 0 2352511..2352738 + 75 62180814 yejL SC2244 - hypothetical protein 2234 52.07 0 2352770..2354530 + 586 62180815 yejM SC2245 - alkaline phosphatase superfamily hydrolase 2235 45.43 -1 2357759..2358163 - 134 62180816 tfa SC2246 - bacteriophage tail fiber assembly protein 2236 54.04 0 2358204..2358995 - 263 62180817 vtf SC2247 - putative tail fiber protein of phage 2237 63.93 +2 2359087..2359269 + 60 62180818 - SC2248 - hypothetical protein 2238 40.61 -1 2359241..2359501 + 86 62180819 msgA SC2249 - homolog of virulence protein MsgA 2239 39.96 -2 2359693..2360250 - 185 62180820 - SC2250 - putative outer membrane protein 2240 52.62 0 2360986..2361633 + 215 62180821 narP SC2251 - transcriptional regulator NarP 2241 67.62 +2 2361677..2362720 - 347 62180822 ccmH SC2252 - putative heme lyase subunit, cytochrome c-type biogenesis 2242 61.83 +1 2362717..2363274 - 185 62180823 ccmG SC2253 - heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis 2243 67.96 +2 2363271..2365202 - 643 62180824 ccmF SC2254 - cytochrome c-type biogenesis protein 2244 65.42 +2 2365199..2365678 - 159 62180825 ccmE SC2255 - cytochrome c-type biogenesis protein CcmE 2245 69.48 +2 2365675..2365887 - 70 62180826 ccmD SC2256 - heme exporter protein C, cytochrome c-type biogenesis protein 2246 65.33 +2 2365884..2366630 - 248 62180827 ccmC SC2257 - heme ABC exporter 2247 69.70 +2 2366673..2367332 - 219 62180828 ccmB SC2258 - heme ABC exporter 2248 72.98 +2 2367329..2367946 - 205 62180829 ccmA SC2259 - cytochrome c biogenesis protein CcmA 2249 51.91 0 2367967..2368569 - 200 62180830 napC SC2260 - cytochrome c-type protein NapC 2250 57.78 +1 2368579..2369028 - 149 62180831 napB SC2261 - diheme cytochrome c550 2251 54.14 0 2369144..2370013 - 289 62180832 napH SC2262 - quinol dehydrogenase membrane component 2252 60.63 +1 2370000..2370695 - 231 62180833 napG SC2263 - quinol dehydrogenase periplasmic component 2253 56.94 0 2370702..2373188 - 828 62180834 napA SC2264 - nitrate reductase 2254 56.31 0 2373185..2373715 - 176 62180835 napD SC2265 - periplasmic nitrate reductase 2255 55.21 0 2374349..2374837 + 162 62180836 eco SC2266 - ecotin precursor 2256 55.11 0 2375046..2376689 - 547 62180837 yojI SC2267 - multidrug transporter membrane component/ATP-binding component 2257 58.83 +1 2376765..2377415 - 216 62180838 alkB SC2268 - DNA repair system specific for alkylated DNA 2258 61.02 +1 2377418..2378479 - 353 62180839 ada SC2269 - O6-methylguanine-DNA methyltransferase/transcription activator/repressor 2259 56.70 0 2378560..2379612 - 350 62180840 apbE SC2270 - thiamine biosynthesis lipoprotein ApbE 2260 52.42 0 2379727..2380863 - 378 62180841 ompC SC2271 - outer membrane porin protein C 2261 51.35 0 2381592..2384261 + 889 62180842 yojN SC2272 - phosphotransfer intermediate protein in two-component regulatory system with RcsBC 2262 49.57 0 2384233..2384928 + 231 62180843 rcsB SC2273 - transcriptional regulator RcsB 2263 53.53 0 2385030..2387876 - 948 62180844 - SC2274 - hybrid sensory kinase in two-component regulatory system with RcsB and YojN 2264 55.56 0 2387994..2390630 - 878 62180845 gyrA SC2275 - DNA gyrase subunit A 2265 43.31 -1 2391040..2392242 - 400 62180846 dgoA SC2276 - putative dehydratase protein 2266 43.99 -1 2392257..2393204 - 315 62180847 tub SC2277 - putative permease 2267 38.79 -2 2393820..2394515 + 231 62180848 ntrA SC2278 - GntR family transcriptional regulator 2268 54.23 0 2394547..2395326 + 259 62180849 ubiG SC2279 - 3-demethylubiquinone-9 3-methyltransferase 2269 53.46 0 2395682..2397967 + 761 62180850 nrdA SC2280 - ribonucleotide-diphosphate reductase subunit alpha 2270 52.08 0 2398080..2399210 + 376 62180851 nrdB SC2281 - ribonucleotide-diphosphate reductase subunit beta 2271 56.08 0 2399210..2399464 + 84 62180852 yfaE SC2282 - 2Fe-2S ferredoxin YfaE 2272 49.34 0 2399466..2400752 - 428 62180853 - SC2283 - putative permease 2273 47.67 0 2400818..2401696 + 292 62180854 yvbU SC2284 - LysR family transcriptional regulator 2274 48.74 0 2401812..2402882 - 356 62180855 glpQ SC2285 - glycerophosphodiester phosphodiesterase 2275 55.04 0 2402887..2404245 - 452 62180856 glpT SC2286 - sn-glycerol-3-phosphate transporter 2276 58.50 +1 2404517..2406145 + 542 62180857 glpA SC2287 - sn-glycerol-3-phosphate dehydrogenase subunit A 2277 59.52 +1 2406135..2407394 + 419 62180858 glpB SC2288 - anaerobic glycerol-3-phosphate dehydrogenase subunit B 2278 53.82 0 2407391..2408581 + 396 62180859 glpC SC2289 - sn-glycerol-3-phosphate dehydrogenase subunit C 2279 37.24 -2 2409007..2410029 + 340 62180860 elaD SC2290 - deubiquitinase 2280 51.61 0 2410139..2410324 - 61 62180861 cinA SC2291 - putative cytoplasmic protein 2281 54.73 0 2410321..2411124 - 267 62180862 yfaU SC2292 - putative aldolase 2282 53.88 0 2411150..2412439 - 429 62180863 yfaV SC2293 - MFS family transporter 2283 53.81 0 2412495..2413700 - 401 62180864 yfaW SC2294 - paral putative galactonate dehydratase 2284 51.34 0 2413714..2414496 - 260 62180865 yfaX SC2295 - putative transcriptional regulator 2285 56.39 0 2414746..2415942 - 398 62180866 cinA SC2296 - competence damage-inducible protein A 2286 49.53 0 2416877..2417302 + 141 62180867 yfaO SC2297 - hypothetical protein 2287 48.02 0 2417347..2417952 - 201 62180868 ais SC2298 - aluminum inducible protein 2288 56.32 0 2418251..2419390 + 379 62180869 yfbE SC2299 - UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 2289 52.54 0 2419393..2420376 + 327 62180870 pmrF SC2300 - undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 2290 57.11 0 2422351..2423250 + 299 62180871 yfbH SC2301 - putative cytoplasmic protein 2291 54.28 0 2423247..2424893 + 548 62180872 arnT SC2302 - 4-amino-4-deoxy-L-arabinose transferase 2292 58.63 +1 2424890..2425225 + 111 62180873 yfbW SC2303 - putative inner membrane protein 2293 53.97 0 2425225..2425602 + 125 62180874 yfbJ SC2304 - hypothetical protein 2294 59.80 +1 2425952..2427319 - 455 62180875 menE SC2305 - O-succinylbenzoic acid--CoA ligase 2295 60.02 +1 2427316..2428278 - 320 62180876 menC SC2306 - O-succinylbenzoate synthase 2296 56.64 0 2428278..2429135 - 285 62180877 menB SC2307 - naphthoate synthase 2297 59.03 +1 2429150..2429908 - 252 62180878 yfbB SC2308 - acyl-CoA thioester hydrolase YfbB 2298 59.61 +1 2429905..2431575 - 556 62180879 menD SC2309 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 2299 56.87 0 2431661..2432956 - 431 62180880 menF SC2310 - menaquinone-specific isochorismate synthase 2300 51.63 0 2433057..2433362 - 101 62180881 elaB SC2311 - hypothetical protein 2301 54.11 0 2433417..2433878 - 153 62180882 elaA SC2312 - hypothetical protein 2302 55.56 0 2433939..2434856 + 305 162139569 elaC SC2313 - ribonuclease Z 2303 52.00 0 2434922..2435923 + 333 62180884 cheV SC2314 - putative chemotaxis signal transduction protein 2304 52.86 0 2435964..2437745 - 593 62180885 yfbK SC2315 - von Willebrand factor type A domain-containing protein 2305 59.47 +1 2438750..2440207 - 485 62180886 nuoN SC2316 - NADH dehydrogenase subunit N 2306 56.21 0 2440214..2441743 - 509 62180887 nuoM SC2317 - NADH dehydrogenase subunit M 2307 57.87 +1 2442057..2443898 - 613 62180888 nuoL SC2318 - NADH dehydrogenase subunit L 2308 54.46 0 2443895..2444197 - 100 62180889 nuoK SC2319 - NADH dehydrogenase subunit K 2309 56.94 0 2444194..2444748 - 184 62180890 nuoJ SC2320 - NADH dehydrogenase subunit J 2310 54.14 0 2444759..2445301 - 180 62180891 nuoI SC2321 - NADH dehydrogenase subunit I 2311 54.60 0 2445316..2446293 - 325 62180892 nuoH SC2322 - NADH dehydrogenase subunit H 2312 58.58 +1 2446290..2449022 - 910 62180893 nuoG SC2323 - NADH dehydrogenase subunit G 2313 58.45 +1 2449047..2450384 - 445 62180894 nuoF SC2324 - NADH dehydrogenase I subunit F 2314 56.09 0 2450381..2450881 - 166 62180895 nuoE SC2325 - NADH dehydrogenase subunit E 2315 56.85 0 2450884..2452686 - 600 62180896 nuoC SC2326 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 2316 54.30 0 2452773..2453435 - 220 62180897 nuoB SC2327 - NADH dehydrogenase subunit B 2317 53.15 0 2453451..2453894 - 147 62180898 nuoA SC2328 - NADH dehydrogenase subunit A 2318 37.91 -2 2454289..2454441 - 50 62180899 - SC2329 - putative cytoplasmic protein 2319 52.72 0 2454521..2455459 - 312 62180900 lrhA SC2330 - LysR family NADH dehydrogenase transcriptional regulator 2320 27.42 -2 2456125..2456310 - 61 62180901 - SC2331 - hypothetical protein 2321 51.52 0 2456392..2457606 + 404 62180902 yfbQ SC2332 - aminotransferase AlaT 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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