version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2168 57.59 0 2280477..2281424 - 315 62180749 yehX SC2179 - putative ABC-type proline/glycine betaine transport system, ATPase component 2169 59.40 +1 2281417..2282586 - 389 62180750 yehY SC2180 - putative ABC-type proline/glycine betaine transport systems, permease component 2170 55.56 0 2282590..2283507 - 305 62180751 yehZ SC2181 - ABC transporter substrate-binding protein 2171 54.57 0 2283688..2285985 - 765 62180752 bglX SC2182 - beta-D-glucoside glucohydrolase, periplasmic 2172 54.02 0 2286252..2287982 + 576 62180753 dld SC2183 - D-lactate dehydrogenase 2173 53.90 0 2288040..2288987 - 315 62180754 pbpG SC2184 - D-alanyl-D-alanine endopeptidase 2174 55.19 0 2289153..2289692 - 179 62180755 yohC SC2185 - hypothetical protein 2175 57.54 0 2289899..2290468 + 189 62180756 yohD SC2186 - DedA family, membrane protein 2176 54.99 0 2290516..2291277 - 253 62180757 yohF SC2187 - acetoin dehydrogenase 2177 57.69 0 2291343..2292779 - 478 62180758 yohG SC2188 - multidrug resistance outer membrane protein MdtQ 2178 29.56 -2 2292830..2292988 - 52 62180759 - SC2189 - hypothetical protein 2179 40.91 -1 2292970..2293167 + 65 62180760 - SC2190 - hypothetical protein 2180 57.19 0 2293238..2294176 - 312 62180761 yohI SC2191 - tRNA-dihydrouridine synthase C 2181 58.63 +1 2294285..2295478 - 397 62180762 nhg SC2192 - salicylate hydroxylase 2182 56.28 0 2295493..2296137 - 214 62180763 maaI SC2193 - putative glutathione S-transferase 2183 54.56 0 2296146..2296847 - 233 62180764 fst SC2194 - putative flutathione S-transferase 2184 56.55 0 2296863..2297900 - 345 62180765 gdo SC2195 - putative 1,2-dioxygenase protein 2185 58.87 +1 2297912..2299270 - 452 62180766 pcaK SC2196 - putative sugar transporter 2186 54.46 0 2299396..2300304 + 302 62180767 gbpR SC2197 - LysR family transcriptional regulator 2187 46.21 -1 2300400..2300834 + 144 62180768 yohJ SC2198 - hypothetical protein 2188 56.03 0 2300831..2301526 + 231 62180769 yohK SC2199 - hypothetical protein 2189 56.38 0 2301680..2302564 + 294 62180770 cdd SC2200 - cytidine deaminase 2190 52.11 0 2302678..2303460 + 260 62180771 sanA SC2201 - hypothetical protein 2191 40.83 -1 2303463..2303702 + 79 62180772 yeiS SC2202 - hypothetical protein 2192 50.40 0 2303907..2305148 + 413 62180773 yeiT SC2203 - putative oxidoreductase 2193 51.38 0 2305142..2306377 + 411 62180774 yeiA SC2204 - dihydropyrimidine dehydrogenase 2194 52.03 0 2306452..2307462 - 336 62180775 mglC SC2205 - beta-methylgalactoside transporter inner membrane component 2195 51.25 0 2309131..2310129 - 332 62180776 mglB SC2206 - galactose ABC transporter permease 2196 55.72 0 2310628..2311650 - 340 62180777 galS SC2207 - DNA-binding transcriptional regulator GalS 2197 55.29 0 2311800..2312942 - 380 62180778 yeiB SC2208 - hypothetical protein 2198 52.17 0 2312957..2313625 - 222 62180779 folE SC2209 - GTP cyclohydrolase I 2199 45.74 -1 2313680..2313808 - 42 62180780 - SC2210 - hypothetical protein 2200 52.05 0 2314803..2315192 - 129 62180781 - SC2211 - putative transcriptional regulator 2201 55.04 0 2315197..2316564 - 455 62180782 sdhL SC2212 - putative D-serine dehydratase 2202 45.16 -1 2316781..2317668 + 295 62180783 serB SC2213 - putative phosphoserine phosphatase 2203 50.94 0 2317701..2319023 + 440 62180784 uhpC SC2214 - putative regulatory protein 2204 54.22 0 2319067..2321058 - 663 62180785 cirA SC2215 - colicin I receptor 2205 53.20 0 2321403..2322872 - 489 62180786 lysP SC2216 - lysine transporter 2206 55.21 0 2323062..2323925 - 287 62180787 yeiE SC2217 - putative DNA-binding transcriptional regulator 2207 54.48 0 2324046..2325095 + 349 62180788 yeiH SC2218 - hypothetical protein 2208 53.85 0 2325174..2326031 + 285 62180789 nfo SC2219 - endonuclease IV 2209 59.03 +1 2326096..2327784 - 562 62180790 fruA SC2220 - fructose-specific PTS system IIBC component 2210 56.55 0 2327801..2328739 - 312 62180791 fruK SC2221 - 1-phosphofructokinase 2211 56.59 0 2328739..2329869 - 376 62180792 fruF SC2222 - bifunctional fructose-specific PTS IIA/HPr protein 2212 54.40 0 2330238..2331419 + 393 62180793 setB SC2223 - proton efflux pump 2213 44.83 -1 2331705..2332913 - 402 62180794 tnpR SC2224 - transposase of Tn10 2214 37.37 -2 2333017..2333487 - 156 62180795 - SC2225 - hypothetical protein 2215 38.21 -2 2333489..2333611 - 40 62180796 - SC2226 - putative inner membrane protein 2216 50.26 0 2334577..2335149 + 190 62180797 yeiP SC2227 - elongation factor P 2217 55.42 0 2335361..2336347 + 328 62180798 yeiR SC2228 - hypothetical protein 2218 51.35 0 2336350..2337015 + 221 62180799 yeiU SC2229 - hypothetical protein 2219 49.56 0 2337509..2338081 + 190 62180800 spr SC2230 - putative outer membrane lipoprotein 2220 51.96 0 2338406..2339962 + 518 62180801 rtn SC2231 - hypothetical protein 2221 51.83 0 2340069..2341874 + 601 62180802 yejA SC2232 - putative ABC transporter periplasmic binding protein 2222 52.42 0 2341884..2342978 + 364 62180803 yejB SC2233 - putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component 2223 55.46 0 2342978..2344003 + 341 62180804 yejE SC2234 - putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component 2224 56.73 0 2344005..2345594 + 529 62180805 yejF SC2235 - ABC transporter ATPase 2225 52.75 0 2345598..2345942 - 114 62180806 yejG SC2236 - hypothetical protein 2226 62.63 +1 2346238..2346336 - 32 62180807 - SC2237 - hypothetical protein 2227 54.16 0 2346333..2347523 - 396 62180808 bcr SC2238 - bicyclomycin/multidrug efflux system 2228 54.02 0 2347551..2348246 - 231 62180809 rsuA SC2239 - 16S rRNA pseudouridylate synthase A 2229 57.07 0 2348398..2350158 + 586 62180810 yejH SC2240 - putative ATP-dependent helicase 2230 51.23 0 2350283..2350567 + 94 62180811 rplY SC2241 - 50S ribosomal protein L25 2231 43.80 -1 2350676..2351296 - 206 62180812 - SC2242 - putative inner membrane protein 2232 53.87 0 2351324..2352331 - 335 62180813 yejK SC2243 - nucleoid-associated protein NdpA 2233 52.63 0 2352511..2352738 + 75 62180814 yejL SC2244 - hypothetical protein 2234 52.07 0 2352770..2354530 + 586 62180815 yejM SC2245 - alkaline phosphatase superfamily hydrolase 2235 45.43 -1 2357759..2358163 - 134 62180816 tfa SC2246 - bacteriophage tail fiber assembly protein 2236 54.04 0 2358204..2358995 - 263 62180817 vtf SC2247 - putative tail fiber protein of phage 2237 63.93 +2 2359087..2359269 + 60 62180818 - SC2248 - hypothetical protein 2238 40.61 -1 2359241..2359501 + 86 62180819 msgA SC2249 - homolog of virulence protein MsgA 2239 39.96 -2 2359693..2360250 - 185 62180820 - SC2250 - putative outer membrane protein 2240 52.62 0 2360986..2361633 + 215 62180821 narP SC2251 - transcriptional regulator NarP 2241 67.62 +2 2361677..2362720 - 347 62180822 ccmH SC2252 - putative heme lyase subunit, cytochrome c-type biogenesis 2242 61.83 +1 2362717..2363274 - 185 62180823 ccmG SC2253 - heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis 2243 67.96 +2 2363271..2365202 - 643 62180824 ccmF SC2254 - cytochrome c-type biogenesis protein 2244 65.42 +2 2365199..2365678 - 159 62180825 ccmE SC2255 - cytochrome c-type biogenesis protein CcmE 2245 69.48 +2 2365675..2365887 - 70 62180826 ccmD SC2256 - heme exporter protein C, cytochrome c-type biogenesis protein 2246 65.33 +2 2365884..2366630 - 248 62180827 ccmC SC2257 - heme ABC exporter 2247 69.70 +2 2366673..2367332 - 219 62180828 ccmB SC2258 - heme ABC exporter 2248 72.98 +2 2367329..2367946 - 205 62180829 ccmA SC2259 - cytochrome c biogenesis protein CcmA 2249 51.91 0 2367967..2368569 - 200 62180830 napC SC2260 - cytochrome c-type protein NapC 2250 57.78 +1 2368579..2369028 - 149 62180831 napB SC2261 - diheme cytochrome c550 2251 54.14 0 2369144..2370013 - 289 62180832 napH SC2262 - quinol dehydrogenase membrane component 2252 60.63 +1 2370000..2370695 - 231 62180833 napG SC2263 - quinol dehydrogenase periplasmic component 2253 56.94 0 2370702..2373188 - 828 62180834 napA SC2264 - nitrate reductase 2254 56.31 0 2373185..2373715 - 176 62180835 napD SC2265 - periplasmic nitrate reductase 2255 55.21 0 2374349..2374837 + 162 62180836 eco SC2266 - ecotin precursor 2256 55.11 0 2375046..2376689 - 547 62180837 yojI SC2267 - multidrug transporter membrane component/ATP-binding component 2257 58.83 +1 2376765..2377415 - 216 62180838 alkB SC2268 - DNA repair system specific for alkylated DNA 2258 61.02 +1 2377418..2378479 - 353 62180839 ada SC2269 - O6-methylguanine-DNA methyltransferase/transcription activator/repressor 2259 56.70 0 2378560..2379612 - 350 62180840 apbE SC2270 - thiamine biosynthesis lipoprotein ApbE 2260 52.42 0 2379727..2380863 - 378 62180841 ompC SC2271 - outer membrane porin protein C 2261 51.35 0 2381592..2384261 + 889 62180842 yojN SC2272 - phosphotransfer intermediate protein in two-component regulatory system with RcsBC 2262 49.57 0 2384233..2384928 + 231 62180843 rcsB SC2273 - transcriptional regulator RcsB 2263 53.53 0 2385030..2387876 - 948 62180844 - SC2274 - hybrid sensory kinase in two-component regulatory system with RcsB and YojN 2264 55.56 0 2387994..2390630 - 878 62180845 gyrA SC2275 - DNA gyrase subunit A 2265 43.31 -1 2391040..2392242 - 400 62180846 dgoA SC2276 - putative dehydratase protein 2266 43.99 -1 2392257..2393204 - 315 62180847 tub SC2277 - putative permease 2267 38.79 -2 2393820..2394515 + 231 62180848 ntrA SC2278 - GntR family transcriptional regulator 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0