version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2061 51.90 0 2158613..2159377 - 254 62180642 - SC2072 - hydrogen sulfide production: membrane anchoring protein 2062 53.89 0 2159374..2159952 - 192 62180643 phsB SC2073 - hydrogen sulfide production: iron- sulfur subunit; electron transfer 2063 55.60 0 2159967..2162243 - 758 62180644 phsA SC2074 - hydrogen sulfide production: membrane anchoring protein 2064 49.66 0 2162487..2162633 - 48 62180645 - SC2075 - putative cytoplasmic protein 2065 50.18 0 2163504..2165207 + 567 62180646 sopA SC2076 - hypothetical protein 2066 54.30 0 2165574..2167004 + 476 62180647 sbcB SC2077 - exonuclease I 2067 53.77 0 2167140..2168504 - 454 62180648 yeeF SC2078 - amino acid APC transporter 2068 52.46 0 2168784..2169698 - 304 62180649 yeeY SC2079 - LysR family transcriptional regulator 2069 56.97 0 2169744..2170568 - 274 62180650 yeeZ SC2080 - hypothetical protein 2070 55.89 0 2170918..2171817 + 299 62180651 hisG SC2081 - ATP phosphoribosyltransferase 2071 58.24 +1 2171920..2173224 + 434 62180652 hisD SC2082 - histidinol dehydrogenase 2072 55.93 0 2173221..2174300 + 359 62180653 - SC2083 - histidinol-phosphate aminotransferase 2073 52.06 0 2174297..2175364 + 355 62180654 hisB SC2084 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 2074 56.73 0 2175361..2175954 + 197 62180655 hisH SC2085 - imidazole glycerol phosphate synthase subunit HisH 2075 58.40 +1 2175954..2176691 + 245 62180656 hisA SC2086 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2076 55.21 0 2176673..2177449 + 258 62180657 hisF SC2087 - imidazole glycerol phosphate synthase subunit HisF 2077 52.94 0 2177443..2178054 + 203 62180658 hisI SC2088 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 2078 50.29 0 2178135..2179172 - 345 62180659 wzzB SC2089 - regulator of length of O-antigen component of lipopolysaccharide chains 2079 43.62 -1 2179261..2180427 - 388 62180660 udg SC2090 - UDP-glucose/GDP-mannose dehydrogenase 2080 51.88 0 2180664..2182070 - 468 62180661 gnd SC2091 - 6-phosphogluconate dehydrogenase 2081 29.86 -2 2182207..2183733 - 508 62180662 - SC2092 - putative 12 transmembrane segment protein 2082 61.12 +1 2184019..2185389 - 456 62180663 manB SC2093 - phosphomannomutase in colanic acid gene cluster 2083 38.83 -2 2185404..2186822 - 472 62180664 manC SC2094 - phosphomannomutase in colanic acid gene cluster 2084 31.31 -2 2186819..2188051 - 410 62180665 - SC2095 - hypothetical protein 2085 30.36 -2 2188005..2189012 - 335 62180666 - SC2096 - hypothetical protein 2086 30.34 -2 2188996..2189997 - 333 62180667 - SC2097 - hypothetical protein 2087 28.98 -2 2189997..2191076 - 359 62180668 - SC2098 - O-antigen polymerase 2088 50.34 0 2191461..2192483 - 340 62180669 galF SC2099 - UTP--glucose-1-phosphate uridylyltransferase subunit GalF 2089 51.28 0 2192532..2193935 - 467 62180670 wcaM SC2100 - putative colanic acid biosynthesis protein 2090 56.27 0 2193946..2195166 - 406 62180671 wcaL SC2101 - putative glycosyl transferase in colanic acid gene cluster 2091 52.85 0 2195163..2196443 - 426 62180672 wcaK SC2102 - putative pyruvyl transferase 2092 51.86 0 2196465..2197943 - 492 62180673 wzxC SC2103 - colanic acid exporter 2093 53.26 0 2198045..2199439 - 464 62180674 wcaJ SC2104 - putative UDP-glucose lipid carrier transferase 2094 62.14 +1 2199493..2200863 - 456 62180675 cpsG SC2105 - phosphomannomutase in colanic acid gene cluster 2095 60.22 +1 2200974..2202416 - 480 62180676 manC SC2106 - mannose-1-phosphate in colanic acid gene cluster 2096 57.84 +1 2202413..2203636 - 407 62180677 wcaI SC2107 - putative glycosyl transferase 2097 59.70 +1 2203633..2204106 - 157 62180678 wcaI SC2108 - putative glycosyl transferase in colanic acid biosynthesis 2098 60.04 +1 2204109..2205074 - 321 62180679 wcaG SC2109 - GDP fucose synthetase 2099 56.95 0 2205077..2206198 - 373 62180680 gmd SC2110 - GDP-D-mannose dehydratase in colanic acid gene cluster 2100 50.45 0 2206222..2206776 - 184 62180681 wcaF SC2111 - putative colanic acid biosynthesis acetyltransferase WcaF 2101 48.86 0 2206792..2207538 - 248 62180682 wcaE SC2112 - putative glycosyl transferase 2102 42.88 -1 2207551..2208765 - 404 62180683 wcaD SC2113 - putative colanic acid biosynthesis protein 2103 55.83 0 2208740..2209957 - 405 62180684 wcaC SC2114 - putative glycosyl transferase 2104 56.03 0 2209954..2210442 - 162 62180685 wcaB SC2115 - putative colanic acid biosynthesis acetyltransferase WcaB 2105 50.89 0 2210445..2211287 - 280 62180686 wcaA SC2116 - glycosyl transferase 2106 53.75 0 2211374..2213533 - 719 62180687 wzc SC2117 - tyrosine kinase 2107 59.34 +1 2213530..2213952 - 140 62180688 wzb SC2118 - tyrosine phosphatase 2108 53.86 0 2213985..2215124 - 379 62180689 wza SC2119 - putative polysaccharide export protein, outer membrane 2109 37.80 -2 2215198..2215443 + 81 62180690 - SC2120 - hypothetical protein 2110 53.89 0 2215799..2217379 + 526 62180691 yegH SC2121 - putative inner membrane protein 2111 56.27 0 2217465..2219321 - 618 62180692 asmA SC2122 - putative assembly protein 2112 59.45 +1 2219360..2219941 - 193 62180693 dcd SC2123 - deoxycytidine triphosphate deaminase 2113 46.88 0 2220032..2220673 - 213 62180694 udk SC2124 - uridine kinase 2114 53.22 0 2220749..2220919 - 56 62180695 - SC2125 - hypothetical protein 2115 54.03 0 2221004..2223994 + 996 62180696 yegE SC2126 - PAS/PAC domain/diguanylate cyclase/phosphodiesterase domain-containing protein 2116 61.15 +1 2223962..2224831 - 289 62180697 alkA SC2127 - 3-methyl-adenine DNA glycosylase II 2117 59.28 +1 2224965..2226317 + 450 62180698 yegD SC2128 - putative chaperone 2118 58.63 +1 2226805..2227998 + 397 62180699 yegM SC2129 - multidrug efflux system subunit MdtA 2119 58.41 +1 2227998..2231120 + 1040 62180700 yegN SC2130 - multidrug efflux system subunit MdtB 2120 56.83 0 2231121..2234201 + 1026 62180701 yegO SC2131 - multidrug efflux system subunit MdtC 2121 57.48 0 2235607..2237010 + 467 62180702 baeS SC2132 - signal transduction histidine-protein kinase BaeS 2122 54.50 0 2237007..2237729 + 240 62180703 baeR SC2133 - DNA-binding transcriptional regulator BaeR 2123 49.04 0 2237998..2239200 + 400 62180704 - SC2134 - putative cytoplasmic protein 2124 57.04 0 2239200..2239916 + 238 62180705 - SC2135 - putative inner membrane protein 2125 53.60 0 2239927..2242038 + 703 62180706 - SC2136 - putative inner membrane protein 2126 53.89 0 2242043..2242762 + 239 62180707 - SC2137 - hypothetical protein 2127 32.26 -2 2242893..2243636 - 247 62180708 - SC2138 - hypothetical protein 2128 44.44 -1 2243740..2243874 - 44 62180709 insA SC2139 - hypothetical protein 2129 32.80 -2 2244086..2244460 - 124 62180710 - SC2140 - hypothetical protein 2130 36.51 -2 2244778..2245155 - 125 62180711 - SC2141 - hypothetical protein 2131 31.54 -2 2245567..2245956 - 129 62180712 yibG SC2142 - hypothetical protein 2132 61.73 +1 2247252..2247494 + 80 62180713 - SC2143 - hypothetical protein 2133 33.88 -2 2247881..2248246 - 121 62180714 yibG SC2144 - hypothetical protein 2134 44.31 -1 2248348..2249085 - 245 62180715 yibJ SC2145 - hypothetical protein 2135 33.71 -2 2249113..2249646 - 177 62180716 - SC2146 - hypothetical protein 2136 34.23 -2 2250248..2250691 - 147 62180717 - SC2147 - hypothetical protein 2137 34.52 -2 2251238..2251657 - 139 62180718 - SC2148 - hypothetical protein 2138 32.73 -2 2252091..2252255 - 54 62180719 - SC2149 - hypothetical protein 2139 48.38 0 2252313..2252930 - 205 62180720 - SC2150 - hypothetical protein 2140 54.48 0 2253094..2254455 + 453 62180721 yegQ SC2151 - putative protease 2141 32.13 -2 2255096..2255512 - 138 62180722 cesT SC2152 - putative cytoplasmic protein 2142 50.00 0 2255634..2255969 - 111 62180723 - SC2153 - putative inner membrane protein 2143 47.01 0 2256331..2256447 - 38 62180724 - SC2154 - hypothetical protein 2144 54.78 0 2256531..2257430 + 299 62180725 yegS SC2155 - lipid kinase 2145 53.18 0 2257483..2258535 - 350 62180726 fbaB SC2156 - fructose-bisphosphate aldolase 2146 51.89 0 2258789..2260060 + 423 62180727 yegT SC2157 - MFS family transporter 2147 58.91 +1 2260057..2261061 + 334 62180728 yegU SC2158 - putative glycohydrolase 2148 60.87 +1 2261058..2262023 + 321 62180729 yegV SC2159 - putative sugar kinase 2149 52.74 0 2261997..2262743 - 248 62180730 yegW SC2160 - GntR family transcriptional regulator 2150 59.80 +1 2262779..2263579 - 266 62180731 thiD SC2161 - phosphomethylpyrimidine kinase 2151 61.28 +1 2263566..2264363 - 265 62180732 thiM SC2162 - hydroxyethylthiazole kinase 2152 47.94 0 2264773..2265087 + 104 62180733 yohN SC2163 - hypothetical protein 2153 41.17 -1 2265349..2266356 - 335 62180734 stcD SC2164 - hypothetical protein 2154 45.78 -1 2266372..2268861 - 829 62180735 stcC SC2165 - paral putative outer membrane protein 2155 40.37 -2 2268875..2269627 - 250 62180736 stcB SC2166 - putative periplasmic chaperone protein 2156 42.75 -1 2269614..2270144 - 176 62180737 stcA SC2167 - paral putative fimbrial-like protein 2157 48.23 0 2270423..2270704 - 93 62180738 yehE SC2168 - hypothetical protein 2158 56.22 0 2270982..2272091 - 369 62180739 mrp SC2169 - putative ATPase 2159 55.26 0 2272256..2274289 + 677 162139570 metG SC2170 - methionyl-tRNA synthetase 2160 43.36 -1 2274530..2274988 + 152 62180741 yehR SC2171 - putative lipoprotein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0