version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2009 38.27 -2 2115401..2115481 - 26 62180590 - SC2020 - hypothetical protein 2010 53.43 0 2116117..2117574 - 485 162139572 yeeO SC2021 - hypothetical protein 2011 47.37 0 2117814..2117984 - 56 62180592 - SC2022 - hypothetical protein 2012 52.58 0 2118035..2118964 - 309 62180593 erfK SC2023 - hypothetical protein 2013 58.76 +1 2119042..2120142 - 366 62180594 cobT SC2024 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2014 56.59 0 2120139..2120882 - 247 62180595 cobS SC2025 - cobalamin synthase 2015 55.13 0 2120879..2121424 - 181 62180596 cobU SC2026 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 2016 55.88 0 2121421..2122941 - 506 62180597 cbiP SC2027 - cobyric acid synthase 2017 52.80 0 2122938..2123579 - 213 62180598 cbiO SC2028 - synthesis of vitamin B12 adenosyl cobalamide precursor 2018 54.19 0 2123762..2124442 - 226 62180599 cboQ SC2029 - synthesis of vitamin B12 adenosyl cobalamide precursor 2019 49.29 0 2124426..2124707 - 93 62180600 cbiN SC2030 - cobalt transport protein CbiN 2020 54.63 0 2124709..2125356 - 215 162139571 cbiM SC2031 - cobalt transport protein CbiM 2021 57.42 0 2125443..2126156 - 237 62180602 cbiL SC2032 - cobalt-precorrin-2 C(20)-methyltransferase 2022 55.60 0 2126153..2126947 - 264 62180603 cbiK SC2033 - synthesis of vitamin B12 adenosyl cobalamide precursor 2023 59.34 +1 2126950..2127741 - 263 62180604 cbiJ SC2034 - cobalt-precorrin-6x reductase 2024 56.47 0 2127738..2128463 - 241 62180605 cbiH SC2035 - precorrin-3B C17-methyltransferase 2025 55.21 0 2128463..2129518 - 351 62180606 cbiG SC2036 - cobalamin biosynthesis protein CbiG 2026 57.11 0 2129499..2130272 - 257 62180607 cbiF SC2037 - synthesis of vitamin B12 adenosyl cobalamide precursor 2027 56.13 0 2130256..2130834 - 192 62180608 cbiT SC2038 - cobalt-precorrin-6Y C(15)-methyltransferase 2028 57.92 +1 2130824..2131429 - 201 62180609 cbiE SC2039 - cobalt-precorrin-6Y C(5)-methyltransferase 2029 55.44 0 2131423..2132562 - 379 62180610 cbiD SC2040 - cobalt-precorrin-6A synthase 2030 55.45 0 2132562..2133194 - 210 62180611 cbiC SC2041 - precorrin-8X methylmutase 2031 59.06 +1 2133205..2134164 - 319 62180612 cobD SC2042 - cobalamin biosynthesis protein 2032 55.87 0 2134161..2135540 - 459 62180613 cbiA SC2043 - cobyrinic acid a,c-diamide synthase 2033 45.83 -1 2136138..2137049 - 303 62180614 pocR SC2044 - propanediol utilization transcriptional regulator 2034 48.34 0 2137266..2138378 - 370 62180615 pduF SC2045 - propanediol utilization: propanediol diffusion facilitator 2035 53.68 0 2138585..2138869 + 94 62180616 pduA SC2046 - propanediol utilization: polyhedral bodies 2036 59.78 +1 2138866..2139678 + 270 62180617 pudB SC2047 - propanediol utilization: polyhedral bodies 2037 56.82 0 2139697..2141361 + 554 62180618 pduC SC2048 - propanediol utilization: dehydratase, large subunit 2038 56.74 0 2141372..2142046 + 224 62180619 pduD SC2049 - propanediol utilization: dehydratase, medium subunit 2039 57.09 0 2142061..2142582 + 173 62180620 pduE SC2050 - propanediol utilization: dehydratase, small subunit 2040 59.85 +1 2142598..2144430 + 610 62180621 pduG SC2051 - propanediol utilization: diol dehydratase reactivation 2041 58.40 +1 2144420..2144770 + 116 62180622 pduH SC2052 - propanediol utilization: diol dehydratase reactivation 2042 55.80 0 2144789..2145064 + 91 62180623 pduJ SC2053 - propanediol utilization: polyhedral bodies 2043 55.49 0 2145068..2145550 + 160 62180624 pduK SC2054 - propanediol utilization: polyhedral bodies 2044 59.87 +1 2145550..2146182 + 210 62180625 pduL SC2055 - hypothetical protein 2045 61.38 +1 2146179..2146670 + 163 62180626 pduM SC2056 - hypothetical protein 2046 60.87 +1 2146674..2146949 + 91 62180627 pduN SC2057 - propanediol utilization: polyhedral bodies 2047 60.63 +1 2146959..2147969 + 336 62180628 pduO SC2058 - hypothetical protein 2048 58.71 +1 2147966..2149360 + 464 62180629 pduP SC2059 - propanediol utilization: CoA-dependent propionaldehyde dehydrogenase 2049 60.47 +1 2149372..2150484 + 370 62180630 pduQ SC2060 - propanediol utilization: propanol dehydrogenase 2050 61.58 +1 2150481..2151836 + 451 62180631 pduS SC2061 - propanediol utilization: polyhedral bodies 2051 54.55 0 2151839..2152168 + 109 62180632 pduT SC2062 - propanediol utilization: polyhedral bodies 2052 57.49 0 2152092..2152298 - 68 62180633 - SC2063 - hypothetical protein 2053 56.94 0 2152149..2152292 + 47 62180634 pduU SC2064 - propanediol utilization: polyhedral bodies 2054 55.85 0 2152297..2152749 + 150 62180635 pduV SC2065 - propanediol utilization 2055 52.43 0 2152734..2153948 + 404 62180636 pduW SC2066 - propionate kinase 2056 55.37 0 2154006..2154908 + 300 62180637 pduX SC2067 - hypothetical protein 2057 46.43 0 2154942..2155277 - 111 62180638 yeeX SC2068 - hypothetical protein 2058 53.82 0 2155522..2156580 - 352 62180639 yeeA SC2069 - hypothetical protein 2059 51.28 0 2156699..2157166 - 155 62180640 sbmC SC2070 - DNA gyrase inhibitor 2060 52.43 0 2157317..2158489 - 390 62180641 dacD SC2071 - D-alanyl-D-alanine carboxypeptidase 2061 51.90 0 2158613..2159377 - 254 62180642 - SC2072 - hydrogen sulfide production: membrane anchoring protein 2062 53.89 0 2159374..2159952 - 192 62180643 phsB SC2073 - hydrogen sulfide production: iron- sulfur subunit; electron transfer 2063 55.60 0 2159967..2162243 - 758 62180644 phsA SC2074 - hydrogen sulfide production: membrane anchoring protein 2064 49.66 0 2162487..2162633 - 48 62180645 - SC2075 - putative cytoplasmic protein 2065 50.18 0 2163504..2165207 + 567 62180646 sopA SC2076 - hypothetical protein 2066 54.30 0 2165574..2167004 + 476 62180647 sbcB SC2077 - exonuclease I 2067 53.77 0 2167140..2168504 - 454 62180648 yeeF SC2078 - amino acid APC transporter 2068 52.46 0 2168784..2169698 - 304 62180649 yeeY SC2079 - LysR family transcriptional regulator 2069 56.97 0 2169744..2170568 - 274 62180650 yeeZ SC2080 - hypothetical protein 2070 55.89 0 2170918..2171817 + 299 62180651 hisG SC2081 - ATP phosphoribosyltransferase 2071 58.24 +1 2171920..2173224 + 434 62180652 hisD SC2082 - histidinol dehydrogenase 2072 55.93 0 2173221..2174300 + 359 62180653 - SC2083 - histidinol-phosphate aminotransferase 2073 52.06 0 2174297..2175364 + 355 62180654 hisB SC2084 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 2074 56.73 0 2175361..2175954 + 197 62180655 hisH SC2085 - imidazole glycerol phosphate synthase subunit HisH 2075 58.40 +1 2175954..2176691 + 245 62180656 hisA SC2086 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2076 55.21 0 2176673..2177449 + 258 62180657 hisF SC2087 - imidazole glycerol phosphate synthase subunit HisF 2077 52.94 0 2177443..2178054 + 203 62180658 hisI SC2088 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 2078 50.29 0 2178135..2179172 - 345 62180659 wzzB SC2089 - regulator of length of O-antigen component of lipopolysaccharide chains 2079 43.62 -1 2179261..2180427 - 388 62180660 udg SC2090 - UDP-glucose/GDP-mannose dehydrogenase 2080 51.88 0 2180664..2182070 - 468 62180661 gnd SC2091 - 6-phosphogluconate dehydrogenase 2081 29.86 -2 2182207..2183733 - 508 62180662 - SC2092 - putative 12 transmembrane segment protein 2082 61.12 +1 2184019..2185389 - 456 62180663 manB SC2093 - phosphomannomutase in colanic acid gene cluster 2083 38.83 -2 2185404..2186822 - 472 62180664 manC SC2094 - phosphomannomutase in colanic acid gene cluster 2084 31.31 -2 2186819..2188051 - 410 62180665 - SC2095 - hypothetical protein 2085 30.36 -2 2188005..2189012 - 335 62180666 - SC2096 - hypothetical protein 2086 30.34 -2 2188996..2189997 - 333 62180667 - SC2097 - hypothetical protein 2087 28.98 -2 2189997..2191076 - 359 62180668 - SC2098 - O-antigen polymerase 2088 50.34 0 2191461..2192483 - 340 62180669 galF SC2099 - UTP--glucose-1-phosphate uridylyltransferase subunit GalF 2089 51.28 0 2192532..2193935 - 467 62180670 wcaM SC2100 - putative colanic acid biosynthesis protein 2090 56.27 0 2193946..2195166 - 406 62180671 wcaL SC2101 - putative glycosyl transferase in colanic acid gene cluster 2091 52.85 0 2195163..2196443 - 426 62180672 wcaK SC2102 - putative pyruvyl transferase 2092 51.86 0 2196465..2197943 - 492 62180673 wzxC SC2103 - colanic acid exporter 2093 53.26 0 2198045..2199439 - 464 62180674 wcaJ SC2104 - putative UDP-glucose lipid carrier transferase 2094 62.14 +1 2199493..2200863 - 456 62180675 cpsG SC2105 - phosphomannomutase in colanic acid gene cluster 2095 60.22 +1 2200974..2202416 - 480 62180676 manC SC2106 - mannose-1-phosphate in colanic acid gene cluster 2096 57.84 +1 2202413..2203636 - 407 62180677 wcaI SC2107 - putative glycosyl transferase 2097 59.70 +1 2203633..2204106 - 157 62180678 wcaI SC2108 - putative glycosyl transferase in colanic acid biosynthesis 2098 60.04 +1 2204109..2205074 - 321 62180679 wcaG SC2109 - GDP fucose synthetase 2099 56.95 0 2205077..2206198 - 373 62180680 gmd SC2110 - GDP-D-mannose dehydratase in colanic acid gene cluster 2100 50.45 0 2206222..2206776 - 184 62180681 wcaF SC2111 - putative colanic acid biosynthesis acetyltransferase WcaF 2101 48.86 0 2206792..2207538 - 248 62180682 wcaE SC2112 - putative glycosyl transferase 2102 42.88 -1 2207551..2208765 - 404 62180683 wcaD SC2113 - putative colanic acid biosynthesis protein 2103 55.83 0 2208740..2209957 - 405 62180684 wcaC SC2114 - putative glycosyl transferase 2104 56.03 0 2209954..2210442 - 162 62180685 wcaB SC2115 - putative colanic acid biosynthesis acetyltransferase WcaB 2105 50.89 0 2210445..2211287 - 280 62180686 wcaA SC2116 - glycosyl transferase 2106 53.75 0 2211374..2213533 - 719 62180687 wzc SC2117 - tyrosine kinase 2107 59.34 +1 2213530..2213952 - 140 62180688 wzb SC2118 - tyrosine phosphatase 2108 53.86 0 2213985..2215124 - 379 62180689 wza SC2119 - putative polysaccharide export protein, outer membrane 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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