version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1966 60.73 +1 2080963..2081670 + 235 62180546 fliH SC1976 - flagellar assembly protein H 1967 59.66 +1 2081670..2083040 + 456 62180547 fliI SC1977 - flagellum-specific ATP synthase 1968 51.35 0 2083062..2083505 + 147 62180548 fliJ SC1978 - flagellar biosynthesis chaperone 1969 61.58 +1 2083502..2084719 + 405 62180549 fliK SC1979 - flagellar hook-length control protein 1970 54.70 0 2084824..2085291 + 155 162139573 fliL SC1980 - flagellar basal body-associated protein FliL 1971 53.33 0 2085296..2086300 + 334 62180551 fliM SC1981 - flagellar motor switch protein FliM 1972 54.35 0 2086297..2086710 + 137 62180552 fliN SC1982 - flagellar motor switch protein FliN 1973 60.32 +1 2086710..2087087 + 125 62180553 fliO SC1983 - flagellar biosynthesis protein FliO 1974 53.66 0 2087087..2087824 + 245 62180554 fliP SC1984 - flagellar biosynthesis protein FliP 1975 51.85 0 2087834..2088103 + 89 62180555 fliQ SC1985 - flagellar biosynthesis protein FliQ 1976 51.57 0 2088112..2088906 + 264 62180556 fliR SC1986 - flagellar biosynthesis protein FliR 1977 38.78 -2 2089188..2089811 + 207 62180557 rcsA SC1987 - capsular/exo- polysaccharide synthesis transcriptional regulator 1978 53.33 0 2089850..2090044 - 64 62180558 dsrB SC1988 - hypothetical protein 1979 47.81 0 2090173..2090400 + 75 62180559 yodD SC1989 - hypothetical protein 1980 55.51 0 2090710..2091525 + 271 62180560 yedP SC1990 - mannosyl-3-phosphoglycerate phosphatase 1981 53.53 0 2091504..2093216 - 570 62180561 yedQ SC1991 - hypothetical protein 1982 52.44 0 2093381..2093626 - 81 62180562 yodC SC1992 - hypothetical protein 1983 56.24 0 2094730..2095650 + 306 62180563 yedA SC1993 - hypothetical protein 1984 56.69 0 2095639..2096109 - 156 62180564 vsr SC1994 - DNA mismatch endonuclease, patch repair protein 1985 53.81 0 2096090..2097520 - 476 62180565 dcm SC1995 - DNA cytosine methylase 1986 54.89 0 2097594..2098289 - 231 62180566 yedJ SC1996 - hypothetical protein 1987 56.73 0 2098369..2098680 - 103 62180567 yedR SC1997 - hypothetical protein 1988 50.67 0 2099330..2100523 + 397 62180568 ompS SC1998 - putative porin 1989 40.39 -2 2100782..2101192 - 136 62180569 cspB SC1999 - putative cold-shock protein 1990 54.69 0 2101647..2102915 - 422 62180570 umuC SC2000 - DNA polymerase V subunit UmuC 1991 49.52 0 2102918..2103337 - 139 62180571 umuD SC2001 - DNA polymerase V subunit UmuD 1992 49.38 0 2103464..2103625 - 53 62180572 - SC2002 - hypothetical protein 1993 50.27 0 2104086..2104817 + 243 62180573 yeeI SC2003 - hypothetical protein 1994 48.54 0 2105173..2105343 + 56 62180574 - SC2004 - hypothetical protein 1995 50.26 0 2105357..2105545 + 62 62180575 int SC2005 - putative P4-type integrase 1996 41.90 -1 2105552..2105656 - 34 62180576 - SC2006 - hypothetical protein 1997 54.65 0 2107147..2107845 + 232 62180578 - SC2008 - putative branched chain amino acid transport protein 1998 46.99 0 2107730..2107978 + 82 62180579 - SC2009 - hypothetical protein 1999 31.45 -2 2108166..2108324 - 52 62180580 - SC2010 - hypothetical protein 2000 44.12 -1 2108419..2110356 + 645 62180581 ybeQ SC2011 - TPR repeat-containing protein 2001 46.33 0 2110413..2112143 + 576 62180582 - SC2012 - putative periplasmic protein 2002 60.00 +1 2112174..2112308 + 44 62180583 - SC2013 - hypothetical protein 2003 60.00 +1 2112201..2112305 - 34 62180584 yajQ SC2014 - hypothetical protein 2004 61.49 +1 2112353..2112526 + 57 62180585 - SC2015 - hypothetical protein 2005 54.90 0 2112677..2112931 - 84 62180586 - SC2016 - hypothetical protein 2006 54.09 0 2113048..2114502 - 484 62180587 amn SC2017 - AMP nucleosidase 2007 40.98 -1 2114698..2115024 - 108 62180588 - SC2018 - putative cytoplasmic protein 2008 46.51 0 2115018..2115404 - 128 62180589 - SC2019 - hypothetical protein 2009 38.27 -2 2115401..2115481 - 26 62180590 - SC2020 - hypothetical protein 2010 53.43 0 2116117..2117574 - 485 162139572 yeeO SC2021 - hypothetical protein 2011 47.37 0 2117814..2117984 - 56 62180592 - SC2022 - hypothetical protein 2012 52.58 0 2118035..2118964 - 309 62180593 erfK SC2023 - hypothetical protein 2013 58.76 +1 2119042..2120142 - 366 62180594 cobT SC2024 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2014 56.59 0 2120139..2120882 - 247 62180595 cobS SC2025 - cobalamin synthase 2015 55.13 0 2120879..2121424 - 181 62180596 cobU SC2026 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 2016 55.88 0 2121421..2122941 - 506 62180597 cbiP SC2027 - cobyric acid synthase 2017 52.80 0 2122938..2123579 - 213 62180598 cbiO SC2028 - synthesis of vitamin B12 adenosyl cobalamide precursor 2018 54.19 0 2123762..2124442 - 226 62180599 cboQ SC2029 - synthesis of vitamin B12 adenosyl cobalamide precursor 2019 49.29 0 2124426..2124707 - 93 62180600 cbiN SC2030 - cobalt transport protein CbiN 2020 54.63 0 2124709..2125356 - 215 162139571 cbiM SC2031 - cobalt transport protein CbiM 2021 57.42 0 2125443..2126156 - 237 62180602 cbiL SC2032 - cobalt-precorrin-2 C(20)-methyltransferase 2022 55.60 0 2126153..2126947 - 264 62180603 cbiK SC2033 - synthesis of vitamin B12 adenosyl cobalamide precursor 2023 59.34 +1 2126950..2127741 - 263 62180604 cbiJ SC2034 - cobalt-precorrin-6x reductase 2024 56.47 0 2127738..2128463 - 241 62180605 cbiH SC2035 - precorrin-3B C17-methyltransferase 2025 55.21 0 2128463..2129518 - 351 62180606 cbiG SC2036 - cobalamin biosynthesis protein CbiG 2026 57.11 0 2129499..2130272 - 257 62180607 cbiF SC2037 - synthesis of vitamin B12 adenosyl cobalamide precursor 2027 56.13 0 2130256..2130834 - 192 62180608 cbiT SC2038 - cobalt-precorrin-6Y C(15)-methyltransferase 2028 57.92 +1 2130824..2131429 - 201 62180609 cbiE SC2039 - cobalt-precorrin-6Y C(5)-methyltransferase 2029 55.44 0 2131423..2132562 - 379 62180610 cbiD SC2040 - cobalt-precorrin-6A synthase 2030 55.45 0 2132562..2133194 - 210 62180611 cbiC SC2041 - precorrin-8X methylmutase 2031 59.06 +1 2133205..2134164 - 319 62180612 cobD SC2042 - cobalamin biosynthesis protein 2032 55.87 0 2134161..2135540 - 459 62180613 cbiA SC2043 - cobyrinic acid a,c-diamide synthase 2033 45.83 -1 2136138..2137049 - 303 62180614 pocR SC2044 - propanediol utilization transcriptional regulator 2034 48.34 0 2137266..2138378 - 370 62180615 pduF SC2045 - propanediol utilization: propanediol diffusion facilitator 2035 53.68 0 2138585..2138869 + 94 62180616 pduA SC2046 - propanediol utilization: polyhedral bodies 2036 59.78 +1 2138866..2139678 + 270 62180617 pudB SC2047 - propanediol utilization: polyhedral bodies 2037 56.82 0 2139697..2141361 + 554 62180618 pduC SC2048 - propanediol utilization: dehydratase, large subunit 2038 56.74 0 2141372..2142046 + 224 62180619 pduD SC2049 - propanediol utilization: dehydratase, medium subunit 2039 57.09 0 2142061..2142582 + 173 62180620 pduE SC2050 - propanediol utilization: dehydratase, small subunit 2040 59.85 +1 2142598..2144430 + 610 62180621 pduG SC2051 - propanediol utilization: diol dehydratase reactivation 2041 58.40 +1 2144420..2144770 + 116 62180622 pduH SC2052 - propanediol utilization: diol dehydratase reactivation 2042 55.80 0 2144789..2145064 + 91 62180623 pduJ SC2053 - propanediol utilization: polyhedral bodies 2043 55.49 0 2145068..2145550 + 160 62180624 pduK SC2054 - propanediol utilization: polyhedral bodies 2044 59.87 +1 2145550..2146182 + 210 62180625 pduL SC2055 - hypothetical protein 2045 61.38 +1 2146179..2146670 + 163 62180626 pduM SC2056 - hypothetical protein 2046 60.87 +1 2146674..2146949 + 91 62180627 pduN SC2057 - propanediol utilization: polyhedral bodies 2047 60.63 +1 2146959..2147969 + 336 62180628 pduO SC2058 - hypothetical protein 2048 58.71 +1 2147966..2149360 + 464 62180629 pduP SC2059 - propanediol utilization: CoA-dependent propionaldehyde dehydrogenase 2049 60.47 +1 2149372..2150484 + 370 62180630 pduQ SC2060 - propanediol utilization: propanol dehydrogenase 2050 61.58 +1 2150481..2151836 + 451 62180631 pduS SC2061 - propanediol utilization: polyhedral bodies 2051 54.55 0 2151839..2152168 + 109 62180632 pduT SC2062 - propanediol utilization: polyhedral bodies 2052 57.49 0 2152092..2152298 - 68 62180633 - SC2063 - hypothetical protein 2053 56.94 0 2152149..2152292 + 47 62180634 pduU SC2064 - propanediol utilization: polyhedral bodies 2054 55.85 0 2152297..2152749 + 150 62180635 pduV SC2065 - propanediol utilization 2055 52.43 0 2152734..2153948 + 404 62180636 pduW SC2066 - propionate kinase 2056 55.37 0 2154006..2154908 + 300 62180637 pduX SC2067 - hypothetical protein 2057 46.43 0 2154942..2155277 - 111 62180638 yeeX SC2068 - hypothetical protein 2058 53.82 0 2155522..2156580 - 352 62180639 yeeA SC2069 - hypothetical protein 2059 51.28 0 2156699..2157166 - 155 62180640 sbmC SC2070 - DNA gyrase inhibitor 2060 52.43 0 2157317..2158489 - 390 62180641 dacD SC2071 - D-alanyl-D-alanine carboxypeptidase 2061 51.90 0 2158613..2159377 - 254 62180642 - SC2072 - hydrogen sulfide production: membrane anchoring protein 2062 53.89 0 2159374..2159952 - 192 62180643 phsB SC2073 - hydrogen sulfide production: iron- sulfur subunit; electron transfer 2063 55.60 0 2159967..2162243 - 758 62180644 phsA SC2074 - hydrogen sulfide production: membrane anchoring protein 2064 49.66 0 2162487..2162633 - 48 62180645 - SC2075 - putative cytoplasmic protein 2065 50.18 0 2163504..2165207 + 567 62180646 sopA SC2076 - hypothetical protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0