version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 143 54.11 0 163772..164209 - 145 62178713 ppdD SC0143 - putative major pilin subunit 144 57.83 +1 164431..165324 - 297 162139623 nadC SC0144 - quinolinate phosphoribosyltransferase 145 55.32 0 165412..165975 + 187 62178715 ampD SC0145 - N-acetyl-anhydromuranmyl-L-alanine amidase 146 55.79 0 165972..166826 + 284 62178716 ampE SC0146 - regulatory protein AmpE 147 53.42 0 166918..167868 - 316 62178717 abf2 SC0147 - putative cytoplasmic protein 148 50.68 0 167868..169274 - 468 62178718 yicJ SC0148 - Na+:galactoside symporter family permease 149 55.53 0 169438..170811 - 457 62178719 aroP SC0149 - aromatic amino acid transporter 150 56.34 0 171374..172138 + 254 62178720 pdhR SC0150 - transcriptional regulator PdhR 151 54.32 0 172298..174961 + 887 62178721 aceE SC0151 - pyruvate dehydrogenase subunit E1 152 55.74 0 174976..176559 + 527 62178722 aceF SC0152 - dihydrolipoamide acetyltransferase 153 54.27 0 176758..178185 + 475 62178723 lpdA SC0153 - dihydrolipoamide dehydrogenase 154 57.19 0 178474..178758 + 94 62178724 - SC0154 - putative outer membrane protein 155 57.07 0 178796..179587 - 263 62178725 - SC0155 - putative periplasmic protein 156 57.16 0 179600..181219 - 539 62178726 yacH SC0156 - hypothetical protein 157 57.89 +1 181608..184205 + 865 62178727 acnB SC0157 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 158 41.94 -1 184245..184709 - 154 62178728 yieI SC0158 - putative inner membrane protein 159 54.32 0 185119..185442 - 107 62178729 ptp SC0159 - putative phosphotyrosine protein phosphatase 160 51.79 0 185713..186075 + 120 162139622 yacL SC0160 - hypothetical protein 161 57.65 0 186310..187263 + 317 62178731 kdgT SC0161 - 2-keto-3-deoxygluconate permease 162 57.86 +1 187260..188531 + 423 62178732 ygbK SC0162 - putative inner membrane protein 163 55.49 0 188521..189504 + 327 62178733 pdxA SC0163 - 4-hydroxythreonine-4-phosphate dehydrogenase 2 164 55.08 0 189514..190281 + 255 62178734 ygbI SC0164 - LysR family transcriptional regulator 165 49.81 0 190311..191105 - 264 62178735 speD SC0165 - S-adenosylmethionine decarboxylase 166 53.54 0 191126..191986 - 286 62178736 speE SC0166 - spermidine synthase 167 47.41 0 192093..192440 - 115 62178737 yacC SC0167 - hypothetical protein 168 56.36 0 192642..194252 + 536 62178738 cueO SC0168 - multicopper oxidase 169 57.53 0 194330..196738 - 802 62178739 gcd SC0169 - glucose dehydrogenase 170 51.02 0 196926..197462 + 178 162139621 hpt SC0170 - hypoxanthine-guanine phosphoribosyltransferase 171 50.08 0 197520..198182 - 220 162139620 yadF SC0171 - carbonic anhydrase 172 49.51 0 198291..199217 + 308 62178742 yadG SC0172 - putative ABC-type multidrug transport system, ATPase component 173 53.96 0 199214..199984 + 256 62178743 yadH SC0173 - ABC transporter membrane protein 174 52.22 0 200101..201180 - 359 62178744 stiH SC0174 - putative fimbriae 175 55.39 0 201189..203732 - 847 62178745 stiC SC0175 - putativie fimbrial usher 176 53.36 0 203759..204442 - 227 62178746 stiB SC0176 - putative fimbrial chaparone 177 52.41 0 204490..205029 - 179 62178747 stiA SC0177 - putative fimbrial subunit 178 51.02 0 205399..205839 + 146 62178748 yadI SC0178 - putative PTS enzyme 179 50.24 0 205901..207130 + 409 62178749 yadE SC0179 - hypothetical protein 180 53.28 0 207137..207517 - 126 62178750 panD SC0180 - aspartate alpha-decarboxylase 181 54.97 0 207612..208466 - 284 62178751 panC SC0181 - pantoate--beta-alanine ligase 182 56.57 0 208592..209383 - 263 62178752 panB SC0182 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 183 57.50 0 209504..209983 - 159 62178753 folK SC0183 - 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase 184 56.17 0 209980..211398 - 472 62178754 pcnB SC0184 - poly(A) polymerase I 185 58.19 +1 211539..212435 - 298 162139619 yadB SC0185 - glutamyl-Q tRNA(Asp) synthetase 186 53.73 0 212504..212959 - 151 162139618 dksA SC0186 - DnaK transcriptional regulator DksA 187 50.07 0 213136..213840 - 234 62178757 sfsA SC0187 - sugar fermentation stimulation protein A 188 62.71 +1 213857..214387 - 176 62178758 ligT SC0188 - 2'-5' RNA ligase 189 59.39 +1 214415..216889 + 824 62178759 hrpB SC0189 - ATP-dependent RNA helicase HrpB 190 56.72 0 217030..219552 + 840 62178760 mrcB SC0190 - penicillin-binding protein 1b 191 51.00 0 219845..222034 + 729 62178761 fhuA SC0191 - ferrichrome outer membrane transporter 192 59.02 +1 222083..222880 + 265 162139617 fhuC SC0192 - iron-hydroxamate transporter ATP-binding subunit 193 58.81 +1 222880..223770 + 296 62178763 fhuD SC0193 - iron-hydroxamate transporter substrate-binding subunit 194 60.54 +1 223767..225824 + 685 62178764 fhuB SC0194 - iron-hydroxamate transporter permease subunit 195 51.52 0 226764..227324 + 186 62178765 stfA SC0195 - putative fimbrial subunit 196 55.08 0 227410..230067 + 885 62178766 stfC SC0196 - putative fimbrial outer membrane usher 197 54.32 0 230085..230837 + 250 62178767 stfD SC0197 - putative periplasmic fimbrial chaperone 198 55.95 0 230856..231368 + 170 62178768 stfE SC0198 - putaive minor fimbrial subunit 199 47.38 0 231365..231841 + 158 62178769 stfF SC0199 - putative minor fimbrial subunit 200 51.79 0 231841..232371 + 176 62178770 stfG SC0200 - putative minor fimbrial subunit; putative adhesin 201 49.65 0 232371..233216 + 281 62178771 yadU SC0201 - hypothetical protein 202 58.78 +1 233324..234604 - 426 62178772 hemL SC0202 - glutamate-1-semialdehyde aminotransferase 203 57.10 0 234774..236195 + 473 62178773 yadQ SC0203 - chloride channel protein 204 48.72 0 236232..236621 + 129 62178774 yadR SC0204 - iron-sulfur cluster insertion protein ErpA 205 56.89 0 236722..237345 - 207 62178775 yadS SC0205 - hypothetical protein 206 55.31 0 237382..238182 - 266 62178776 btuF SC0206 - vitamin B12-transporter protein BtuF 207 56.94 0 238175..238873 - 232 62178777 pfs SC0207 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 208 48.88 0 238958..240475 + 505 62178778 dgt SC0208 - deoxyguanosinetriphosphate triphosphohydrolase 209 54.00 0 240596..242032 + 478 62178779 htrA SC0209 - serine endoprotease 210 54.84 0 242185..243342 + 385 62178780 cdaR SC0210 - carbohydrate diacid transcriptional activator CdaR 211 46.51 0 243431..243817 - 128 62178781 yaeH SC0211 - hypothetical protein 212 51.31 0 244064..245365 + 433 62178782 shiA SC0212 - putative inner membrane protein 213 53.82 0 245402..246226 - 274 62178783 dapD SC0213 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 214 55.97 0 246256..248928 - 890 62178784 glnD SC0214 - PII uridylyl-transferase 215 52.70 0 249041..249835 - 264 62178785 map SC0215 - methionine aminopeptidase 216 51.24 0 250286..251011 + 241 62178786 rpsB SC0216 - 30S ribosomal protein S2 217 52.46 0 251269..252120 + 283 162139616 tsf SC0217 - elongation factor Ts 218 53.72 0 252265..252990 + 241 62178788 pyrH SC0218 - uridylate kinase 219 51.08 0 253137..253694 + 185 62178789 frr SC0219 - ribosome recycling factor 220 56.14 0 253894..255033 + 379 62178790 dxr SC0220 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 221 51.12 0 255346..256104 + 252 62178791 uppS SC0221 - undecaprenyl pyrophosphate synthase 222 52.68 0 256117..256974 + 285 162139615 cdsA SC0222 - CDP-diglyceride synthase 223 53.07 0 256986..258338 + 450 62178793 yaeL SC0223 - zinc metallopeptidase 224 52.48 0 258370..260787 + 805 62178794 yaeT SC0224 - outer membrane protein assembly factor YaeT 225 47.53 0 260910..261395 + 161 62178795 hlpA SC0225 - periplasmic chaperone 226 52.14 0 261399..262424 + 341 62178796 lpxD SC0226 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 227 50.55 0 262440..262985 + 181 62178797 fabZ SC0227 - (3R)-hydroxymyristoyl-ACP dehydratase 228 53.49 0 262989..263777 + 262 62178798 lpxA SC0228 - UDP-N-acetylglucosamine acyltransferase 229 55.87 0 263777..264925 + 382 62178799 lpxB SC0229 - lipid-A-disaccharide synthase 230 55.95 0 264922..265518 + 198 62178800 rnhB SC0230 - ribonuclease HII 231 56.01 0 265542..269024 + 1160 62178801 dnaE SC0231 - DNA polymerase III subunit alpha 232 54.90 0 269037..269996 + 319 62178802 accA SC0232 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 233 55.27 0 270177..271940 + 587 62178803 chi2 SC0233 - putative endochitinase 234 52.01 0 272016..274157 + 713 62178804 ldcC SC0234 - lysine decarboxylase 2, constitutive 235 52.31 0 274213..274602 + 129 62178805 yaeR SC0235 - hypothetical protein 236 59.09 +1 274665..275957 + 430 62178806 tilS SC0236 - tRNA(Ile)-lysidine synthetase 237 44.06 -1 276041..276301 - 86 62178807 rof SC0237 - Rho-binding antiterminator 238 49.75 0 276288..276488 - 66 62178808 yaeP SC0238 - hypothetical protein 239 55.49 0 276686..277231 + 181 62178809 yaeQ SC0239 - hypothetical protein 240 55.32 0 277228..277650 + 140 62178810 yaeJ SC0240 - hypothetical protein 241 54.68 0 278453..280171 - 572 162139614 proS SC0241 - prolyl-tRNA synthetase 242 55.23 0 280282..280989 - 235 62178812 yaeB SC0242 - hypothetical protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0