version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1742 48.80 0 1864184..1864642 + 152 62180320 ychJ SC1750 - hypothetical protein 1743 50.77 0 1864693..1865535 + 280 162139580 purU SC1751 - formyltetrahydrofolate deformylase 1744 49.41 0 1866706..1868235 - 509 62180323 ybeQ SC1753 - TPR repeat-containing protein 1745 43.52 -1 1868220..1868435 + 71 62180324 - SC1754 - hypothetical protein 1746 55.16 0 1868477..1869154 - 225 62180325 narI SC1755 - nitrate reductase 1, cytochrome b(NR), gamma subunit 1747 55.27 0 1869154..1869864 - 236 62180326 narJ SC1756 - nitrate reductase 1, delta subunit, chaperone required for molybdenum cofactor assembly in nitrate reductase 1 1748 55.21 0 1869861..1871396 - 511 62180327 narH SC1757 - nitrate reductase 1, FeS (beta) subunit 1749 56.09 0 1871393..1875136 - 1247 62180328 narG SC1758 - nitrate reductase 1, alpha subunit 1750 54.32 0 1875524..1876957 - 477 62180329 narK SC1759 - major facilitator superfamily nitrite extrusion protein 1751 53.81 0 1877262..1879058 + 598 62180330 narX SC1760 - nitrate/nitrite sensor protein NarX 1752 53.46 0 1879051..1879701 + 216 62180331 narL SC1761 - transcriptional regulator NarL 1753 53.07 0 1879702..1881231 - 509 62180332 ychP SC1762 - hypothetical protein 1754 51.98 0 1881303..1881656 + 117 62180333 ychN SC1763 - hypothetical protein 1755 45.02 -1 1881736..1881966 - 76 62180334 chaB SC1764 - cation transport regulator 1756 50.68 0 1882233..1883333 + 366 62180335 chaA SC1765 - calcium/sodium:proton antiporter 1757 55.09 0 1883387..1884241 - 284 62180336 kdsA SC1766 - 2-dehydro-3-deoxyphosphooctonate aldolase 1758 48.77 0 1884279..1885088 - 269 62180337 ychA SC1767 - putative transcriptional regulator 1759 51.03 0 1885092..1885481 - 129 62180338 sirC SC1768 - putative transcriptional regulator 1760 58.75 +1 1885478..1886311 - 277 62180339 hemK SC1769 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1761 57.71 0 1886311..1887393 - 360 62180340 prfA SC1770 - peptide chain release factor 1 1762 56.64 0 1887434..1888690 - 418 62180341 hemA SC1771 - glutamyl-tRNA reductase 1763 56.09 0 1889004..1889627 + 207 62180342 lolB SC1772 - outer membrane lipoprotein LolB 1764 54.93 0 1889624..1890475 + 283 62180343 ipk SC1773 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1765 54.34 0 1890675..1891688 + 337 62180344 prsA SC1774 - ribose-phosphate pyrophosphokinase 1766 56.52 0 1891813..1893498 + 561 62180345 ychM SC1775 - putative sulfate transporter YchM 1767 51.25 0 1893543..1893821 - 92 62180346 ychH SC1776 - hypothetical protein 1768 51.56 0 1894073..1894681 + 202 62180347 pth SC1777 - peptidyl-tRNA hydrolase 1769 52.75 0 1894798..1895889 + 363 62180348 ychF SC1778 - translation-associated GTPase 1770 32.75 -2 1896582..1896923 + 113 62180349 - SC1779 - hypothetical protein 1771 31.70 -2 1897458..1897763 + 101 62180350 - SC1780 - hypothetical protein 1772 38.55 -2 1898239..1899504 - 421 62180351 - SC1781 - putative cytoplasmic protein 1773 57.30 0 1900029..1901117 + 362 62180352 mbhS SC1782 - hydrogenase-1 small subunit 1774 55.33 0 1902927..1903658 + 243 62180353 cybH SC1783 - hydrogenase 1 b-type cytochrome subunit 1775 57.62 0 1903655..1904251 + 198 62180354 hyaD SC1784 - hydrogenase 1 maturation protease 1776 57.78 +1 1904241..1904645 + 134 62180355 hyaE SC1785 - hydrogenase-1 operon protein HyaE 1777 59.13 +1 1904642..1905490 + 282 62180356 hyaF SC1786 - putative hydrogenase-1 protein 1778 50.00 0 1908270..1908359 + 29 62180357 - SC1787 - hypothetical protein 1779 55.81 0 1908703..1910028 + 441 62180358 gdh SC1788 - glutamic dehyrogenase 1780 55.58 0 1910242..1911954 + 570 62180359 treA SC1789 - trehalase 1781 56.08 0 1912017..1912271 - 84 62180360 ymgE SC1790 - putative transglycosylase-associated protein 1782 52.79 0 1912440..1913174 + 244 62180361 ycgR SC1791 - hypothetical protein 1783 53.10 0 1913188..1913799 - 203 62180362 emtA SC1792 - membrane-bound lytic murein transglycosylase E 1784 56.33 0 1913971..1914879 + 302 62180363 ldcA SC1793 - L,D-carboxypeptidase A 1785 54.50 0 1914982..1916715 + 577 62180364 ycgO SC1794 - potassium/proton antiporter 1786 57.24 0 1916778..1917848 - 356 62180365 dadX SC1795 - alanine racemase 1787 56.27 0 1917862..1919160 - 432 62180366 dadA SC1796 - D-amino acid dehydrogenase small subunit 1788 49.90 0 1919483..1921015 + 510 62180367 ycgB SC1797 - hypothetical protein 1789 52.02 0 1921062..1921805 - 247 62180368 fadR SC1798 - fatty acid metabolism regulator 1790 53.14 0 1922001..1923545 + 514 62180369 nhaB SC1799 - sodium/proton antiporter 1791 54.99 0 1923687..1924217 + 176 62180370 dsbB SC1800 - disulfide bond formation protein B 1792 51.17 0 1924326..1924667 + 113 62180371 yeaR SC1801 - putative cytoplasmic protein 1793 45.98 -1 1924738..1924911 - 57 62180372 rpmF SC1802 - hypothetical protein 1794 50.72 0 1925104..1925241 - 45 62180373 - SC1803 - hypothetical protein 1795 49.22 0 1925593..1926039 - 148 162139579 ycgN SC1804 - hypothetical protein 1796 53.33 0 1926132..1926791 - 219 62180375 ycgM SC1805 - hypothetical protein 1797 45.35 -1 1926841..1927173 - 110 62180376 ycgL SC1806 - putative cytoplasmic protein 1798 51.41 0 1927260..1927967 + 235 62180377 minC SC1807 - septum formation inhibitor 1799 51.91 0 1927991..1928803 + 270 62180378 minD SC1808 - cell division inhibitor MinD 1800 43.45 -1 1928807..1929073 + 88 62180379 minE SC1809 - cell division topological specificity factor MinE 1801 55.32 0 1929195..1930322 - 375 62180380 rnd SC1810 - ribonuclease D 1802 52.40 0 1930394..1931935 - 513 62180381 fadD SC1811 - long-chain-fatty-acid--CoA ligase 1803 37.20 -2 1932099..1932305 + 68 62180382 - SC1812 - hypothetical protein 1804 56.01 0 1932284..1932865 - 193 62180383 slp SC1813 - putative outer membrane protein 1805 60.34 +1 1932937..1933632 - 231 62180384 yeaZ SC1814 - putative molecular chaperone 1806 56.25 0 1933690..1935600 - 636 62180385 yoaA SC1815 - putative DNA helicase 1807 50.14 0 1935732..1936076 + 114 62180386 yoaB SC1816 - hypothetical protein 1808 50.56 0 1936082..1936261 - 59 62180387 yoaH SC1817 - hypothetical protein 1809 55.46 0 1936342..1937706 + 454 62180388 pabB SC1818 - para-aminobenzoate synthase component I 1810 58.89 +1 1937710..1938288 + 192 62180389 yeaB SC1819 - hypothetical protein 1811 55.68 0 1938570..1939916 + 448 62180390 sdaA SC1820 - L-serine deaminase I/L-threonine deaminase I 1812 53.52 0 1939952..1941655 + 567 62180391 yoaD SC1821 - hypothetical protein 1813 55.71 0 1941677..1943236 - 519 62180392 yoaE SC1822 - putative inner membrane protein 1814 41.96 -1 1943224..1943559 - 111 62180393 - SC1823 - putative cytoplasmic protein 1815 52.73 0 1943709..1944677 + 322 62180394 manX SC1824 - sugar specific PTS family mannose-specific enzyme IIAB 1816 56.18 0 1944730..1945530 + 266 62180395 manY SC1825 - sugar specific PTS family mannose-specific enzyme IIC 1817 54.59 0 1945534..1946394 + 286 62180396 manZ SC1826 - mannose-specific PTS system protein IID 1818 45.53 -1 1946453..1946911 + 152 62180397 yobD SC1827 - hypothetical protein 1819 53.30 0 1947267..1947887 + 206 62180398 yebN SC1828 - hypothetical protein 1820 56.17 0 1947884..1948693 - 269 62180399 rrmA SC1829 - 23S rRNA methyltransferase A 1821 52.75 0 1948758..1950503 - 581 62180400 ftsI SC1830 - putative penicillin-binding protein-3 1822 47.14 0 1950723..1950932 - 69 62180401 cspC SC1831 - cold shock-like protein CspC 1823 40.28 -2 1950945..1951088 - 47 62180402 yobF SC1832 - putative cytoplasmic protein 1824 53.26 0 1951664..1951939 + 91 62180403 insA SC1833 - insertion element IS1 1/2/3/5/6 protein insA 1825 54.76 0 1951858..1952361 + 167 62180404 insB SC1834 - IS1 transposase 1826 49.65 0 1952513..1952800 - 95 62180405 yebO SC1835 - hypothetical protein 1827 43.75 -1 1952871..1953014 - 47 62180406 yobG SC1836 - hypothetical protein 1828 52.50 0 1953172..1953411 + 79 62180407 - SC1837 - hypothetical protein 1829 49.37 0 1953623..1954414 - 263 62180408 kdgR SC1838 - IclR family transcriptional regulator 1830 54.95 0 1954590..1955963 + 457 62180409 yebQ SC1839 - putative transport protein 1831 52.95 0 1956011..1956892 - 293 62180410 htpX SC1840 - heat shock protein HtpX 1832 51.93 0 1957086..1959134 - 682 62180411 prc SC1841 - carboxy-terminal protease 1833 53.71 0 1959154..1959840 - 228 62180412 proQ SC1842 - putative solute/DNA competence effector 1834 50.77 0 1959938..1960522 - 194 62180413 yebR SC1843 - GAF domain-containing protein 1835 52.02 0 1960564..1961847 + 427 62180414 yebS SC1844 - hypothetical protein 1836 54.45 0 1961774..1964449 + 891 62180415 yebT SC1845 - hypothetical protein 1837 55.07 0 1964527..1965966 + 479 162139578 yebU SC1846 - rRNA (cytosine-C(5)-)-methyltransferase RsmF 1838 50.42 0 1966081..1966320 + 79 62180417 yebV SC1847 - hypothetical protein 1839 48.44 0 1966430..1966621 + 63 62180418 - SC1848 - hypothetical protein 1840 52.84 0 1966640..1967290 - 216 162139577 pphA SC1849 - serine/threonine protein phosphatase 1 1841 47.88 0 1967513..1967677 - 54 62180420 - SC1850 - putative inner membrane protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0