version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1680 52.37 0 1800299..1801291 + 330 62180258 sapD SC1688 - peptide ABC transporter ATP-binding protein 1681 53.90 0 1801293..1802099 + 268 62180259 sapF SC1689 - peptide ABC transporter ATP-binding protein 1682 48.31 0 1802115..1802822 - 235 62180260 ydiV SC1690 - hypothetical protein 1683 39.96 -2 1803288..1804661 - 457 62180261 - SC1691 - hypothetical protein 1684 28.89 -2 1804696..1804875 + 59 62180262 - SC1692 - putative e6 protein 1685 49.00 0 1804850..1805149 + 99 62180263 ycjE SC1693 - putative cytoplasmic protein 1686 54.12 0 1805267..1806055 + 262 62180264 fabI SC1694 - enoyl-(acyl carrier protein) reductase 1687 55.48 0 1806255..1807175 + 306 62180265 yciW SC1695 - putative cytoplasmic protein 1688 55.71 0 1807477..1809411 + 644 62180266 rnb SC1696 - exoribonuclease II 1689 50.58 0 1809673..1811655 + 660 62180267 yciR SC1697 - RNase II stability modulator 1690 47.42 0 1811744..1811956 + 70 62180268 - SC1698 - hypothetical protein 1691 50.20 0 1812043..1812795 + 250 62180269 yciT SC1699 - DeoR family transcriptional regulator 1692 59.36 +1 1813054..1813272 + 72 62180270 osmB SC1700 - lipoprotein 1693 46.18 -1 1813392..1813718 - 108 62180271 yciH SC1701 - translation initiation factor Sui1 1694 56.64 0 1813718..1814455 - 245 62180272 pyrF SC1702 - orotidine 5'-phosphate decarboxylase 1695 51.62 0 1814646..1815815 - 389 62180273 yciM SC1703 - hypothetical protein 1696 51.13 0 1815822..1816130 - 102 62180274 yciS SC1704 - hypothetical protein 1697 56.34 0 1816280..1817044 - 254 62180275 pgpB SC1705 - phosphatidylglycerophosphatase B 1698 50.59 0 1817240..1817830 + 196 62180276 ribA SC1706 - GTP cyclohydrolase II 1699 55.64 0 1817886..1820561 - 891 62180277 acnA SC1707 - aconitate hydratase 1700 54.39 0 1820946..1821116 - 56 62180278 - SC1708 - hypothetical protein 1701 49.46 0 1821117..1821302 - 61 62180279 yciX SC1709 - hypothetical protein 1702 51.90 0 1821538..1822512 - 324 62180280 cysB SC1710 - transcriptional regulator CysB 1703 54.12 0 1822924..1825521 - 865 62180281 topA SC1711 - DNA topoisomerase I 1704 48.02 0 1825924..1826175 + 83 62180282 yciN SC1712 - hypothetical protein 1705 54.35 0 1826217..1827263 - 348 62180283 sohB SC1713 - putative periplasmic protease 1706 56.69 0 1827501..1828262 + 253 62180284 yciK SC1714 - short chain dehydrogenase 1707 53.64 0 1828259..1828849 + 196 62180285 btuR SC1715 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1708 56.62 0 1828936..1829811 - 291 62180286 yciL SC1716 - 23S rRNA pseudouridylate synthase B 1709 53.62 0 1829912..1830532 - 206 62180287 yciO SC1717 - hypothetical protein 1710 56.01 0 1830540..1831421 - 293 62180288 trpH SC1718 - trpR controlled transcriptional unit in the 5' upstream region of the trp operon 1711 58.09 +1 1831682..1833244 + 520 62180289 trpE SC1719 - anthranilate synthase component I 1712 57.27 0 1833244..1834839 + 531 62180290 trpD SC1720 - bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase 1713 55.11 0 1834843..1836201 + 452 62180291 trpC SC1721 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 1714 56.03 0 1836211..1837404 + 397 62180292 trpB SC1722 - tryptophan synthase subunit beta 1715 57.13 0 1837404..1838210 + 268 62180293 trpA SC1723 - tryptophan synthase subunit alpha 1716 51.37 0 1838690..1838872 + 60 62180294 yciG SC1724 - putative cytoplasmic protein 1717 42.86 -1 1838962..1839465 + 167 62180295 yciF SC1725 - hypothetical protein 1718 43.20 -1 1839539..1840045 + 168 62180296 yciE SC1726 - hypothetical protein 1719 54.15 0 1840065..1840943 + 292 62180297 ctjC SC1727 - hypothetical protein 1720 52.58 0 1841025..1841663 - 212 62180298 ompW SC1728 - outer membrane protein W 1721 51.36 0 1842001..1842405 + 134 62180299 ykgJ SC1729 - hypothetical protein 1722 51.34 0 1842431..1843174 + 247 62180300 yciC SC1730 - hypothetical protein 1723 47.22 0 1843231..1843770 + 179 62180301 yciB SC1731 - intracellular septation protein A 1724 54.23 0 1843931..1844332 + 133 62180302 yciA SC1732 - acyl-CoA thioester hydrolase 1725 54.26 0 1844391..1845236 - 281 62180303 tonB SC1733 - transport protein TonB 1726 53.54 0 1845337..1845633 + 98 62180304 yciI SC1734 - YciI-like protein 1727 53.80 0 1845993..1847453 + 486 62180305 cls SC1735 - cardiolipin synthetase 1728 50.61 0 1847487..1847816 + 109 62180306 yciU SC1736 - dsDNA-mimic protein 1729 48.03 0 1847864..1848700 - 278 62180307 cikL SC1737 - putative voltage-gated potassium channel 1730 53.93 0 1848748..1849752 - 334 62180308 oppF SC1738 - oligopeptide ABC transporter ATP-binding protein 1731 52.38 0 1849749..1850756 - 335 62180309 oppD SC1739 - oligopeptide transporter ATP-binding component 1732 52.70 0 1850768..1851676 - 302 62180310 oppC SC1740 - oligoeptide ABC transporter 1733 50.92 0 1851691..1852611 - 306 62180311 oppB SC1741 - oligopeptide transporter permease 1734 47.80 0 1852733..1854481 - 582 62180312 oppA SC1742 - oligopeptide ABC transporter periplasmic-binding protein 1735 50.77 0 1855130..1855777 - 215 62180313 ychE SC1743 - hypothetical protein 1736 53.12 0 1856254..1858932 + 892 62180314 adhE SC1744 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase 1737 48.71 0 1859129..1859746 - 205 62180315 tdk SC1745 - thymidine kinase 1738 45.65 -1 1860409..1860822 + 137 62180316 hns SC1746 - global DNA-binding transcriptional dual regulator H-NS 1739 49.72 0 1860953..1861861 - 302 62180317 galU SC1747 - UTP--glucose-1-phosphate uridylyltransferase subunit GalU 1740 50.69 0 1862064..1863077 - 337 62180318 hnr SC1748 - response regulator of RpoS 1741 50.77 0 1863168..1864073 - 301 62180319 ychK SC1749 - hypothetical protein 1742 48.80 0 1864184..1864642 + 152 62180320 ychJ SC1750 - hypothetical protein 1743 50.77 0 1864693..1865535 + 280 162139580 purU SC1751 - formyltetrahydrofolate deformylase 1744 49.41 0 1866706..1868235 - 509 62180323 ybeQ SC1753 - TPR repeat-containing protein 1745 43.52 -1 1868220..1868435 + 71 62180324 - SC1754 - hypothetical protein 1746 55.16 0 1868477..1869154 - 225 62180325 narI SC1755 - nitrate reductase 1, cytochrome b(NR), gamma subunit 1747 55.27 0 1869154..1869864 - 236 62180326 narJ SC1756 - nitrate reductase 1, delta subunit, chaperone required for molybdenum cofactor assembly in nitrate reductase 1 1748 55.21 0 1869861..1871396 - 511 62180327 narH SC1757 - nitrate reductase 1, FeS (beta) subunit 1749 56.09 0 1871393..1875136 - 1247 62180328 narG SC1758 - nitrate reductase 1, alpha subunit 1750 54.32 0 1875524..1876957 - 477 62180329 narK SC1759 - major facilitator superfamily nitrite extrusion protein 1751 53.81 0 1877262..1879058 + 598 62180330 narX SC1760 - nitrate/nitrite sensor protein NarX 1752 53.46 0 1879051..1879701 + 216 62180331 narL SC1761 - transcriptional regulator NarL 1753 53.07 0 1879702..1881231 - 509 62180332 ychP SC1762 - hypothetical protein 1754 51.98 0 1881303..1881656 + 117 62180333 ychN SC1763 - hypothetical protein 1755 45.02 -1 1881736..1881966 - 76 62180334 chaB SC1764 - cation transport regulator 1756 50.68 0 1882233..1883333 + 366 62180335 chaA SC1765 - calcium/sodium:proton antiporter 1757 55.09 0 1883387..1884241 - 284 62180336 kdsA SC1766 - 2-dehydro-3-deoxyphosphooctonate aldolase 1758 48.77 0 1884279..1885088 - 269 62180337 ychA SC1767 - putative transcriptional regulator 1759 51.03 0 1885092..1885481 - 129 62180338 sirC SC1768 - putative transcriptional regulator 1760 58.75 +1 1885478..1886311 - 277 62180339 hemK SC1769 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1761 57.71 0 1886311..1887393 - 360 62180340 prfA SC1770 - peptide chain release factor 1 1762 56.64 0 1887434..1888690 - 418 62180341 hemA SC1771 - glutamyl-tRNA reductase 1763 56.09 0 1889004..1889627 + 207 62180342 lolB SC1772 - outer membrane lipoprotein LolB 1764 54.93 0 1889624..1890475 + 283 62180343 ipk SC1773 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1765 54.34 0 1890675..1891688 + 337 62180344 prsA SC1774 - ribose-phosphate pyrophosphokinase 1766 56.52 0 1891813..1893498 + 561 62180345 ychM SC1775 - putative sulfate transporter YchM 1767 51.25 0 1893543..1893821 - 92 62180346 ychH SC1776 - hypothetical protein 1768 51.56 0 1894073..1894681 + 202 62180347 pth SC1777 - peptidyl-tRNA hydrolase 1769 52.75 0 1894798..1895889 + 363 62180348 ychF SC1778 - translation-associated GTPase 1770 32.75 -2 1896582..1896923 + 113 62180349 - SC1779 - hypothetical protein 1771 31.70 -2 1897458..1897763 + 101 62180350 - SC1780 - hypothetical protein 1772 38.55 -2 1898239..1899504 - 421 62180351 - SC1781 - putative cytoplasmic protein 1773 57.30 0 1900029..1901117 + 362 62180352 mbhS SC1782 - hydrogenase-1 small subunit 1774 55.33 0 1902927..1903658 + 243 62180353 cybH SC1783 - hydrogenase 1 b-type cytochrome subunit 1775 57.62 0 1903655..1904251 + 198 62180354 hyaD SC1784 - hydrogenase 1 maturation protease 1776 57.78 +1 1904241..1904645 + 134 62180355 hyaE SC1785 - hydrogenase-1 operon protein HyaE 1777 59.13 +1 1904642..1905490 + 282 62180356 hyaF SC1786 - putative hydrogenase-1 protein 1778 50.00 0 1908270..1908359 + 29 62180357 - SC1787 - hypothetical protein 1779 55.81 0 1908703..1910028 + 441 62180358 gdh SC1788 - glutamic dehyrogenase 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0