version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1609 42.71 -1 1722213..1722788 - 191 62180187 yceI SC1617 - putative periplasmic protein 1610 54.37 0 1722984..1724699 - 571 62180188 mdoD SC1618 - glucan biosynthesis protein D 1611 54.24 0 1726416..1727759 - 447 62180189 ydcj SC1619 - putative cytoplasmic protein 1612 53.58 0 1727983..1728975 + 330 62180190 ydcI SC1620 - LysR family transcriptional regulator 1613 54.00 0 1729036..1730661 - 541 62180191 trg SC1621 - methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor 1614 53.17 0 1730830..1731948 - 372 62180192 adh3 SC1622 - alcohol dehydrogenase class III 1615 48.29 0 1731980..1732360 - 126 62180193 yohL SC1623 - putative cytoplasmic protein 1616 41.54 -1 1732778..1733179 + 133 62180194 dpr SC1624 - putative dipicolinate reductase 1617 41.87 -1 1733607..1733969 - 120 62180195 tfpB SC1625 - putative inner membrane protein 1618 39.12 -2 1734452..1735678 + 408 62180196 sseJ SC1626 - translocated effector: regulated by SPI-2 1619 46.96 0 1735799..1736143 - 114 62180197 - SC1627 - putative inner membrane protein 1620 41.99 -1 1737050..1737280 + 76 62180198 - SC1628 - putative periplasmic binding protein 1621 41.98 -1 1737817..1738464 + 215 62180199 yckA SC1629 - putative amino acid ABC transporter permease component 1622 43.99 -1 1738489..1739220 + 243 62180200 gltL SC1630 - putative ABC-type polar amino acid transport system, ATPase component 1623 43.32 -1 1739217..1739897 + 226 62180201 - SC1631 - putative ABC-type transport system membrane spanning protein 1624 48.10 0 1740034..1740534 + 166 62180202 - SC1632 - putative inner membrane protein 1625 46.67 0 1740813..1740962 + 49 62180203 - SC1633 - hypothetical protein 1626 46.61 0 1742046..1742708 + 220 62180204 ybcY SC1634 - putative SAM-dependent methyltransferase 1627 54.81 0 1743626..1744426 - 266 62180205 ydcF SC1635 - hypothetical protein 1628 53.80 0 1744490..1748335 - 1281 162139583 hrpA SC1636 - ATP-dependent RNA helicase HrpA 1629 53.47 0 1748593..1749198 + 201 62180207 acpD SC1637 - azoreductase 1630 50.00 0 1749195..1749644 - 149 62180208 - SC1638 - putative inner membrane protein 1631 52.16 0 1749787..1750110 - 107 62180209 ydbL SC1639 - putative periplasmic protein 1632 45.31 -1 1750118..1750309 - 63 62180210 ynbE SC1640 - putative outer membrane lipoprotein 1633 55.59 0 1750309..1752945 - 878 62180211 ydbH SC1641 - hypothetical protein 1634 51.41 0 1753212..1754201 + 329 62180212 ldhA SC1642 - D-lactate dehydrogenase 1635 52.55 0 1754312..1754722 + 136 62180213 hslJ SC1643 - heat-inducible protein 1636 57.68 0 1754766..1755032 - 88 62180214 ydbJ SC1644 - putative cytoplasmic protein 1637 54.95 0 1755308..1758832 + 1174 62180215 nifJ SC1645 - putative pyruvate-flavodoxin oxidoreductase 1638 47.59 0 1759314..1759748 + 144 62180216 ynaF SC1646 - hypothetical protein 1639 41.30 -1 1759798..1760136 - 112 62180217 emrE SC1647 - putative membrane transporter of cations 1640 48.23 0 1760300..1760440 + 46 62180218 intR SC1648 - putative lambdoid prophage Rac integrase 1641 50.53 0 1760492..1761427 + 311 62180219 ydaO SC1649 - C32 tRNA thiolase 1642 54.73 0 1761471..1762844 - 457 62180220 dbpA SC1650 - ATP-dependent RNA helicase DbpA 1643 52.54 0 1763332..1764315 - 327 62180221 zntB SC1651 - zinc transporter 1644 47.82 0 1764539..1765615 - 358 62180222 mcp SC1652 - putative methyl-accepting chemotaxis protein 1645 35.63 -2 1765626..1765799 - 57 62180223 - SC1653 - hypothetical protein 1646 52.84 0 1766008..1766571 - 187 62180224 ydaL SC1654 - Smr domain-containing protein 1647 55.04 0 1766829..1767344 + 171 62180225 ogt SC1655 - O-6-alkylguanine-DNA:cysteine-protein methyltransferase 1648 50.07 0 1767540..1768292 + 250 162139582 fnr SC1656 - fumarate/nitrate reduction transcriptional regulator 1649 51.79 0 1768443..1769390 + 315 62180227 ydaA SC1657 - universal stress protein UspE 1650 43.93 -1 1769445..1769831 - 128 62180228 ynaJ SC1658 - hypothetical protein 1651 44.86 -1 1769938..1770969 + 343 62180229 ynaI SC1659 - hypothetical protein 1652 51.41 0 1771052..1771654 - 200 62180230 ydcN SC1660 - putative transcriptional regulator 1653 54.44 0 1771698..1772384 + 228 62180231 - SC1661 - hypothetical protein 1654 42.18 -1 1772412..1772750 + 112 62180232 - SC1662 - hypothetical protein 1655 40.79 -1 1773513..1774343 - 276 62180233 - SC1663 - hypothetical protein 1656 47.99 0 1776384..1777229 - 281 62180234 - SC1664 - putative serine/threonine protein kinase 1657 38.46 -2 1777523..1778380 + 285 62180235 cafR SC1665 - AraC family regulatory protein 1658 42.71 -1 1778827..1779882 + 351 62180236 - SC1666 - putative cytoplasmic protein 1659 46.67 0 1780096..1780350 - 84 62180237 - SC1667 - putative outer membrane lipoprotein 1660 57.70 0 1780461..1781051 - 196 62180238 yjgJ SC1668 - AraC family regulatory protein 1661 57.14 0 1781129..1781842 + 237 62180239 yjgI SC1669 - oxidoreductase 1662 47.01 0 1781933..1782802 - 289 62180240 - SC1670 - aldo/keto reductase family protein 1663 55.19 0 1783079..1783984 - 301 62180241 yjgC SC1671 - LysR family transcriptional regulator 1664 50.37 0 1784843..1786744 - 633 62180242 mppA SC1672 - periplasmic murein tripeptide transport protein, also negative regulator of mulitple antibiotic resistance 1665 57.89 +1 1786934..1787662 + 242 62180243 ycjI SC1673 - murein peptide amidase A 1666 57.56 0 1787637..1788602 - 321 62180244 ycjG SC1674 - putative chloromuconate cycloisomerase (muconate cycloisomerase) 1667 49.70 0 1788718..1789224 + 168 62180245 tpx SC1675 - thiol peroxidase 1668 53.44 0 1789313..1790854 - 513 62180246 tyrR SC1676 - DNA-binding transcriptional regulator TyrR 1669 57.16 0 1791002..1792063 - 353 62180247 ycjF SC1677 - hypothetical protein 1670 53.70 0 1792060..1793463 - 467 62180248 ycjX SC1678 - putative ATPase 1671 43.17 -1 1793606..1793920 - 104 62180249 pspE SC1679 - thiosulfate:cyanide sulfurtransferase (rhodanese) 1672 55.91 0 1793996..1794181 - 61 62180250 pspD SC1680 - peripheral inner membrane phage-shock protein 1673 51.94 0 1794237..1794596 - 119 62180251 pspC SC1681 - DNA-binding transcriptional activator PspC 1674 54.22 0 1794596..1794820 - 74 62180252 pspB SC1682 - phage shock protein B 1675 51.42 0 1794880..1795548 - 222 62180253 pspA SC1683 - phage shock protein PspA 1676 54.33 0 1795719..1796699 + 326 162139581 pspF SC1684 - phage shock protein operon transcriptional activator 1677 53.70 0 1796787..1798460 + 557 62180255 sapA SC1685 - peptide ABC transporter periplasmic-binding protein 1678 53.00 0 1798457..1799422 + 321 62180256 sapB SC1686 - peptide ABC transporter 1679 57.91 +1 1799409..1800299 + 296 62180257 sapC SC1687 - peptide ABC transporter 1680 52.37 0 1800299..1801291 + 330 62180258 sapD SC1688 - peptide ABC transporter ATP-binding protein 1681 53.90 0 1801293..1802099 + 268 62180259 sapF SC1689 - peptide ABC transporter ATP-binding protein 1682 48.31 0 1802115..1802822 - 235 62180260 ydiV SC1690 - hypothetical protein 1683 39.96 -2 1803288..1804661 - 457 62180261 - SC1691 - hypothetical protein 1684 28.89 -2 1804696..1804875 + 59 62180262 - SC1692 - putative e6 protein 1685 49.00 0 1804850..1805149 + 99 62180263 ycjE SC1693 - putative cytoplasmic protein 1686 54.12 0 1805267..1806055 + 262 62180264 fabI SC1694 - enoyl-(acyl carrier protein) reductase 1687 55.48 0 1806255..1807175 + 306 62180265 yciW SC1695 - putative cytoplasmic protein 1688 55.71 0 1807477..1809411 + 644 62180266 rnb SC1696 - exoribonuclease II 1689 50.58 0 1809673..1811655 + 660 62180267 yciR SC1697 - RNase II stability modulator 1690 47.42 0 1811744..1811956 + 70 62180268 - SC1698 - hypothetical protein 1691 50.20 0 1812043..1812795 + 250 62180269 yciT SC1699 - DeoR family transcriptional regulator 1692 59.36 +1 1813054..1813272 + 72 62180270 osmB SC1700 - lipoprotein 1693 46.18 -1 1813392..1813718 - 108 62180271 yciH SC1701 - translation initiation factor Sui1 1694 56.64 0 1813718..1814455 - 245 62180272 pyrF SC1702 - orotidine 5'-phosphate decarboxylase 1695 51.62 0 1814646..1815815 - 389 62180273 yciM SC1703 - hypothetical protein 1696 51.13 0 1815822..1816130 - 102 62180274 yciS SC1704 - hypothetical protein 1697 56.34 0 1816280..1817044 - 254 62180275 pgpB SC1705 - phosphatidylglycerophosphatase B 1698 50.59 0 1817240..1817830 + 196 62180276 ribA SC1706 - GTP cyclohydrolase II 1699 55.64 0 1817886..1820561 - 891 62180277 acnA SC1707 - aconitate hydratase 1700 54.39 0 1820946..1821116 - 56 62180278 - SC1708 - hypothetical protein 1701 49.46 0 1821117..1821302 - 61 62180279 yciX SC1709 - hypothetical protein 1702 51.90 0 1821538..1822512 - 324 62180280 cysB SC1710 - transcriptional regulator CysB 1703 54.12 0 1822924..1825521 - 865 62180281 topA SC1711 - DNA topoisomerase I 1704 48.02 0 1825924..1826175 + 83 62180282 yciN SC1712 - hypothetical protein 1705 54.35 0 1826217..1827263 - 348 62180283 sohB SC1713 - putative periplasmic protease 1706 56.69 0 1827501..1828262 + 253 62180284 yciK SC1714 - short chain dehydrogenase 1707 53.64 0 1828259..1828849 + 196 62180285 btuR SC1715 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1708 56.62 0 1828936..1829811 - 291 62180286 yciL SC1716 - 23S rRNA pseudouridylate synthase B 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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