version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1579 55.23 0 1691487..1692002 + 171 62180157 yncA SC1587 - putative acyltransferase 1580 55.33 0 1692002..1692451 + 149 62180158 ydcZ SC1588 - hypothetical protein 1581 56.84 0 1692456..1692689 - 77 62180159 ydcY SC1589 - hypothetical protein 1582 55.96 0 1692913..1694238 + 441 62180160 srfA SC1590 - ssrAB activated gene 1583 55.20 0 1694243..1697224 + 993 62180161 srfB SC1591 - ssrAB activated gene 1584 57.06 0 1697221..1699365 + 714 62180162 srfC SC1592 - ssrAB activated gene: coiled-coil structure 1585 43.94 -1 1699410..1699673 - 87 62180163 ydcX SC1593 - putative inner membrane protein 1586 55.79 0 1699982..1701406 - 474 162139585 ydcW SC1594 - gamma-aminobutyraldehyde dehydrogenase 1587 53.05 0 1701542..1702966 - 474 62180165 ydcR SC1595 - GntR family transcriptional regulator 1588 47.34 0 1703102..1703872 - 256 62180166 pdgL SC1596 - periplasmic dipeptidase for D-ala-D-ala digestion in peptidoglycan 1589 41.99 -1 1704131..1704361 - 76 62180167 - SC1597 - putative inner membrane protein 1590 40.10 -2 1704394..1704792 - 132 62180168 ugtL SC1598 - hypothetical protein 1591 37.43 -2 1705329..1706279 + 316 162139584 sifB SC1599 - secreted effector protein 1592 51.95 0 1706553..1706783 + 76 62180170 yncJ SC1600 - hypothetical protein 1593 52.72 0 1706784..1708748 - 654 62180171 ydcP SC1601 - putative collagenase 1594 53.07 0 1708827..1709363 - 178 62180172 ydcN SC1602 - putative oxidoreductase/putative repressor 1595 56.74 0 1709394..1710632 + 412 62180173 ydcO SC1603 - putative benzoate membrane transport protein 1596 49.92 0 1710686..1711312 - 208 62180174 ydcL SC1604 - putative outer membrane lipoprotein 1597 49.92 0 1711518..1712114 - 198 62180175 tehB SC1605 - tellurite resistance protein TehB 1598 55.13 0 1712101..1713114 - 337 62180176 tehA SC1606 - potassium-tellurite ethidium and proflavin transporter 1599 50.56 0 1714199..1714738 - 179 62180177 rimL SC1607 - ribosomal-protein-L7/L12-serine acetyltransferase 1600 55.41 0 1714955..1716073 + 372 62180178 sgcX SC1608 - putative cellulase protein 1601 50.00 0 1716070..1716351 + 93 62180179 sgcB SC1609 - putative PTS system, enzymeIIB component 1602 52.13 0 1716362..1717675 + 437 62180180 sgcC SC1610 - putative PTS system enzyme IIC component 1603 52.91 0 1717689..1718495 + 268 62180181 sgcQ SC1611 - putative nucleoside triphosphatase 1604 57.31 0 1718627..1719064 + 145 62180182 sgcA SC1612 - putative sugar specific PTS enzyme II 1605 56.40 0 1719076..1719708 + 210 62180183 sgcE SC1613 - ribulose-phosphate 3-epimerase 1606 51.39 0 1719724..1720515 + 263 62180184 sgcR SC1614 - DeoR family transcriptional regulator 1607 51.83 0 1720515..1720952 + 145 62180185 aac6 SC1615 - cryptic aminoglycoside resistance gene 1608 48.13 0 1720999..1722201 - 400 62180186 gox SC1616 - putative oxidase 1609 42.71 -1 1722213..1722788 - 191 62180187 yceI SC1617 - putative periplasmic protein 1610 54.37 0 1722984..1724699 - 571 62180188 mdoD SC1618 - glucan biosynthesis protein D 1611 54.24 0 1726416..1727759 - 447 62180189 ydcj SC1619 - putative cytoplasmic protein 1612 53.58 0 1727983..1728975 + 330 62180190 ydcI SC1620 - LysR family transcriptional regulator 1613 54.00 0 1729036..1730661 - 541 62180191 trg SC1621 - methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor 1614 53.17 0 1730830..1731948 - 372 62180192 adh3 SC1622 - alcohol dehydrogenase class III 1615 48.29 0 1731980..1732360 - 126 62180193 yohL SC1623 - putative cytoplasmic protein 1616 41.54 -1 1732778..1733179 + 133 62180194 dpr SC1624 - putative dipicolinate reductase 1617 41.87 -1 1733607..1733969 - 120 62180195 tfpB SC1625 - putative inner membrane protein 1618 39.12 -2 1734452..1735678 + 408 62180196 sseJ SC1626 - translocated effector: regulated by SPI-2 1619 46.96 0 1735799..1736143 - 114 62180197 - SC1627 - putative inner membrane protein 1620 41.99 -1 1737050..1737280 + 76 62180198 - SC1628 - putative periplasmic binding protein 1621 41.98 -1 1737817..1738464 + 215 62180199 yckA SC1629 - putative amino acid ABC transporter permease component 1622 43.99 -1 1738489..1739220 + 243 62180200 gltL SC1630 - putative ABC-type polar amino acid transport system, ATPase component 1623 43.32 -1 1739217..1739897 + 226 62180201 - SC1631 - putative ABC-type transport system membrane spanning protein 1624 48.10 0 1740034..1740534 + 166 62180202 - SC1632 - putative inner membrane protein 1625 46.67 0 1740813..1740962 + 49 62180203 - SC1633 - hypothetical protein 1626 46.61 0 1742046..1742708 + 220 62180204 ybcY SC1634 - putative SAM-dependent methyltransferase 1627 54.81 0 1743626..1744426 - 266 62180205 ydcF SC1635 - hypothetical protein 1628 53.80 0 1744490..1748335 - 1281 162139583 hrpA SC1636 - ATP-dependent RNA helicase HrpA 1629 53.47 0 1748593..1749198 + 201 62180207 acpD SC1637 - azoreductase 1630 50.00 0 1749195..1749644 - 149 62180208 - SC1638 - putative inner membrane protein 1631 52.16 0 1749787..1750110 - 107 62180209 ydbL SC1639 - putative periplasmic protein 1632 45.31 -1 1750118..1750309 - 63 62180210 ynbE SC1640 - putative outer membrane lipoprotein 1633 55.59 0 1750309..1752945 - 878 62180211 ydbH SC1641 - hypothetical protein 1634 51.41 0 1753212..1754201 + 329 62180212 ldhA SC1642 - D-lactate dehydrogenase 1635 52.55 0 1754312..1754722 + 136 62180213 hslJ SC1643 - heat-inducible protein 1636 57.68 0 1754766..1755032 - 88 62180214 ydbJ SC1644 - putative cytoplasmic protein 1637 54.95 0 1755308..1758832 + 1174 62180215 nifJ SC1645 - putative pyruvate-flavodoxin oxidoreductase 1638 47.59 0 1759314..1759748 + 144 62180216 ynaF SC1646 - hypothetical protein 1639 41.30 -1 1759798..1760136 - 112 62180217 emrE SC1647 - putative membrane transporter of cations 1640 48.23 0 1760300..1760440 + 46 62180218 intR SC1648 - putative lambdoid prophage Rac integrase 1641 50.53 0 1760492..1761427 + 311 62180219 ydaO SC1649 - C32 tRNA thiolase 1642 54.73 0 1761471..1762844 - 457 62180220 dbpA SC1650 - ATP-dependent RNA helicase DbpA 1643 52.54 0 1763332..1764315 - 327 62180221 zntB SC1651 - zinc transporter 1644 47.82 0 1764539..1765615 - 358 62180222 mcp SC1652 - putative methyl-accepting chemotaxis protein 1645 35.63 -2 1765626..1765799 - 57 62180223 - SC1653 - hypothetical protein 1646 52.84 0 1766008..1766571 - 187 62180224 ydaL SC1654 - Smr domain-containing protein 1647 55.04 0 1766829..1767344 + 171 62180225 ogt SC1655 - O-6-alkylguanine-DNA:cysteine-protein methyltransferase 1648 50.07 0 1767540..1768292 + 250 162139582 fnr SC1656 - fumarate/nitrate reduction transcriptional regulator 1649 51.79 0 1768443..1769390 + 315 62180227 ydaA SC1657 - universal stress protein UspE 1650 43.93 -1 1769445..1769831 - 128 62180228 ynaJ SC1658 - hypothetical protein 1651 44.86 -1 1769938..1770969 + 343 62180229 ynaI SC1659 - hypothetical protein 1652 51.41 0 1771052..1771654 - 200 62180230 ydcN SC1660 - putative transcriptional regulator 1653 54.44 0 1771698..1772384 + 228 62180231 - SC1661 - hypothetical protein 1654 42.18 -1 1772412..1772750 + 112 62180232 - SC1662 - hypothetical protein 1655 40.79 -1 1773513..1774343 - 276 62180233 - SC1663 - hypothetical protein 1656 47.99 0 1776384..1777229 - 281 62180234 - SC1664 - putative serine/threonine protein kinase 1657 38.46 -2 1777523..1778380 + 285 62180235 cafR SC1665 - AraC family regulatory protein 1658 42.71 -1 1778827..1779882 + 351 62180236 - SC1666 - putative cytoplasmic protein 1659 46.67 0 1780096..1780350 - 84 62180237 - SC1667 - putative outer membrane lipoprotein 1660 57.70 0 1780461..1781051 - 196 62180238 yjgJ SC1668 - AraC family regulatory protein 1661 57.14 0 1781129..1781842 + 237 62180239 yjgI SC1669 - oxidoreductase 1662 47.01 0 1781933..1782802 - 289 62180240 - SC1670 - aldo/keto reductase family protein 1663 55.19 0 1783079..1783984 - 301 62180241 yjgC SC1671 - LysR family transcriptional regulator 1664 50.37 0 1784843..1786744 - 633 62180242 mppA SC1672 - periplasmic murein tripeptide transport protein, also negative regulator of mulitple antibiotic resistance 1665 57.89 +1 1786934..1787662 + 242 62180243 ycjI SC1673 - murein peptide amidase A 1666 57.56 0 1787637..1788602 - 321 62180244 ycjG SC1674 - putative chloromuconate cycloisomerase (muconate cycloisomerase) 1667 49.70 0 1788718..1789224 + 168 62180245 tpx SC1675 - thiol peroxidase 1668 53.44 0 1789313..1790854 - 513 62180246 tyrR SC1676 - DNA-binding transcriptional regulator TyrR 1669 57.16 0 1791002..1792063 - 353 62180247 ycjF SC1677 - hypothetical protein 1670 53.70 0 1792060..1793463 - 467 62180248 ycjX SC1678 - putative ATPase 1671 43.17 -1 1793606..1793920 - 104 62180249 pspE SC1679 - thiosulfate:cyanide sulfurtransferase (rhodanese) 1672 55.91 0 1793996..1794181 - 61 62180250 pspD SC1680 - peripheral inner membrane phage-shock protein 1673 51.94 0 1794237..1794596 - 119 62180251 pspC SC1681 - DNA-binding transcriptional activator PspC 1674 54.22 0 1794596..1794820 - 74 62180252 pspB SC1682 - phage shock protein B 1675 51.42 0 1794880..1795548 - 222 62180253 pspA SC1683 - phage shock protein PspA 1676 54.33 0 1795719..1796699 + 326 162139581 pspF SC1684 - phage shock protein operon transcriptional activator 1677 53.70 0 1796787..1798460 + 557 62180255 sapA SC1685 - peptide ABC transporter periplasmic-binding protein 1678 53.00 0 1798457..1799422 + 321 62180256 sapB SC1686 - peptide ABC transporter 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0