version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1527 53.38 0 1633977..1634879 + 300 62180105 ydeD SC1535 - O-acetylserine/cysteine export protein 1528 50.00 0 1634998..1635255 - 85 62180106 marB SC1536 - hypothetical protein 1529 46.61 0 1635242..1635625 - 127 62180107 marA SC1537 - DNA-binding transcriptional activator MarA 1530 48.05 0 1635645..1636079 - 144 62180108 marR SC1538 - DNA-binding transcriptional repressor MarR 1531 53.45 0 1636338..1637003 + 221 62180109 marC SC1539 - multiple drug resistance protein MarC 1532 53.06 0 1637050..1638240 - 396 62180110 ydeA SC1540 - sugar efflux transporter 1533 56.80 0 1639331..1640719 + 462 62180111 yneI SC1541 - putative succinate-semialdehyde dehydrogenase 1534 54.58 0 1640792..1641718 + 308 62180112 yneH SC1542 - glutaminase 1535 54.44 0 1641718..1642077 + 119 62180113 yneG SC1543 - hypothetical protein 1536 45.57 -1 1642301..1643248 + 315 62180114 yneE SC1544 - putative inner membrane protein 1537 48.99 0 1643304..1643846 - 180 62180115 - SC1545 - putative outer membrane protein 1538 43.43 -1 1643734..1643931 - 65 62180116 - SC1546 - hypothetical protein 1539 46.02 -1 1644563..1645681 + 372 62180117 ompC SC1547 - putative outer membrane protein 1540 50.29 0 1645822..1646163 - 113 62180118 hybF SC1548 - putative hydrogenase 1541 54.14 0 1646176..1646997 - 273 62180119 hupK SC1549 - putative dehydrogenase protein 1542 50.00 0 1647051..1648112 - 353 62180120 hoxQ SC1550 - putative hydrogenase 1543 53.04 0 1648130..1648540 - 136 62180121 hyaE SC1551 - putative hydrogenase 1544 56.33 0 1648537..1648836 - 99 62180122 hupF SC1552 - putative hydrogenase protein 1545 53.04 0 1648836..1649444 - 202 62180123 hupD SC1553 - putative hydrogenase maturation protease 1546 51.11 0 1649450..1650124 - 224 62180124 cybH SC1554 - putative Ni/Fe-hydrogenase 1 b-type cytochrome subunit 1547 53.73 0 1650144..1650947 - 267 62180125 mbhL SC1555 - putative hydrogenase-1 large subunit 1548 51.52 0 1650950..1651279 - 109 62180126 mbhS SC1556 - putative hydrogenase-1 small subunit 1549 44.31 -1 1651177..1651686 - 169 62180127 pqaA SC1557 - PhoPQ-regulated protein 1550 50.00 0 1652035..1652172 - 45 62180128 - SC1558 - putative multidrug efflux protein 1551 54.70 0 1652136..1652603 - 155 62180129 - SC1559 - putative monooxygenase 1552 53.93 0 1653209..1654543 - 444 62180130 treY SC1560 - putative glycosyl hydrolase 1553 53.95 0 1654540..1656324 - 594 62180131 treZ SC1561 - putative alpha amylase 1554 54.07 0 1656453..1657238 - 261 62180132 - SC1562 - putative outer membrane or secreted lipoprotein 1555 44.85 -1 1657381..1657710 - 109 62180133 hdeB SC1563 - acid-resistance protein 1556 51.85 0 1658060..1658491 - 143 62180134 osmC SC1564 - putative resistance protein, osmotically inducible 1557 49.07 0 1659003..1659218 + 71 62180135 yddX SC1565 - biofilm-dependent modulation protein 1558 50.00 0 1659313..1659456 + 47 62180136 rpsV SC1566 - 30S ribosomal subunit S22 1559 52.88 0 1659597..1661330 + 577 62180137 sfcA SC1567 - malate dehydrogenase 1560 53.31 0 1661616..1662626 + 336 62180138 adhP SC1568 - alcohol dehydrogenase 1561 48.40 0 1662717..1663373 - 218 62180139 fdnI SC1569 - formate dehydrogenase-N subunit gamma 1562 53.79 0 1663366..1664250 - 294 62180140 fdnH SC1570 - formate dehydrogenase-N, Fe-S beta subunit, nitrate-inducible 1563 50.23 0 1667589..1668470 + 293 162139587 yddG SC1571 - hypothetical protein 1564 50.41 0 1668993..1670081 + 362 62180142 nmpC SC1572 - new outer membrane protein; porin 1565 55.10 0 1670165..1670605 + 146 62180143 - SC1573 - putative cytoplasmic protein 1566 57.80 +1 1670630..1672117 - 495 62180144 smvA SC1574 - methyl viologen resistance 1567 56.48 0 1672235..1672813 + 192 62180145 - SC1575 - TetR family transcriptional regulator 1568 52.27 0 1673027..1674415 + 462 62180146 narU SC1576 - major facilitator superfamily nitrate extrusion protein 1569 53.66 0 1678244..1679788 + 514 62180147 narY SC1577 - nitrate reductase 2, beta subunit 1570 54.46 0 1679788..1681155 + 455 62180148 narV SC1578 - nitrate reductase 2, gamma subunit 1571 53.13 0 1681260..1682153 + 297 62180149 yddE SC1579 - hypothetical protein 1572 48.21 0 1682189..1682356 - 55 62180150 nhoA SC1580 - putative arylamine N-acetyltransferase 1573 42.34 -1 1682657..1683289 - 210 62180151 - SC1581 - hypothetical protein 1574 53.41 0 1683802..1685295 + 497 62180152 ansP SC1582 - L-asparagine APC transporter 1575 43.24 -1 1685372..1685593 - 73 62180153 ygdR SC1583 - putative outer membrane lipoprotein 1576 51.60 0 1685738..1686799 - 353 62180154 yncE SC1584 - putative periplasmic protein 1577 53.04 0 1687063..1689183 + 706 162139586 yncD SC1585 - paral putative outer membrane receptor 1578 53.78 0 1690238..1691308 - 356 62180156 yncB SC1586 - putative NADP-dependent oxidoreductase 1579 55.23 0 1691487..1692002 + 171 62180157 yncA SC1587 - putative acyltransferase 1580 55.33 0 1692002..1692451 + 149 62180158 ydcZ SC1588 - hypothetical protein 1581 56.84 0 1692456..1692689 - 77 62180159 ydcY SC1589 - hypothetical protein 1582 55.96 0 1692913..1694238 + 441 62180160 srfA SC1590 - ssrAB activated gene 1583 55.20 0 1694243..1697224 + 993 62180161 srfB SC1591 - ssrAB activated gene 1584 57.06 0 1697221..1699365 + 714 62180162 srfC SC1592 - ssrAB activated gene: coiled-coil structure 1585 43.94 -1 1699410..1699673 - 87 62180163 ydcX SC1593 - putative inner membrane protein 1586 55.79 0 1699982..1701406 - 474 162139585 ydcW SC1594 - gamma-aminobutyraldehyde dehydrogenase 1587 53.05 0 1701542..1702966 - 474 62180165 ydcR SC1595 - GntR family transcriptional regulator 1588 47.34 0 1703102..1703872 - 256 62180166 pdgL SC1596 - periplasmic dipeptidase for D-ala-D-ala digestion in peptidoglycan 1589 41.99 -1 1704131..1704361 - 76 62180167 - SC1597 - putative inner membrane protein 1590 40.10 -2 1704394..1704792 - 132 62180168 ugtL SC1598 - hypothetical protein 1591 37.43 -2 1705329..1706279 + 316 162139584 sifB SC1599 - secreted effector protein 1592 51.95 0 1706553..1706783 + 76 62180170 yncJ SC1600 - hypothetical protein 1593 52.72 0 1706784..1708748 - 654 62180171 ydcP SC1601 - putative collagenase 1594 53.07 0 1708827..1709363 - 178 62180172 ydcN SC1602 - putative oxidoreductase/putative repressor 1595 56.74 0 1709394..1710632 + 412 62180173 ydcO SC1603 - putative benzoate membrane transport protein 1596 49.92 0 1710686..1711312 - 208 62180174 ydcL SC1604 - putative outer membrane lipoprotein 1597 49.92 0 1711518..1712114 - 198 62180175 tehB SC1605 - tellurite resistance protein TehB 1598 55.13 0 1712101..1713114 - 337 62180176 tehA SC1606 - potassium-tellurite ethidium and proflavin transporter 1599 50.56 0 1714199..1714738 - 179 62180177 rimL SC1607 - ribosomal-protein-L7/L12-serine acetyltransferase 1600 55.41 0 1714955..1716073 + 372 62180178 sgcX SC1608 - putative cellulase protein 1601 50.00 0 1716070..1716351 + 93 62180179 sgcB SC1609 - putative PTS system, enzymeIIB component 1602 52.13 0 1716362..1717675 + 437 62180180 sgcC SC1610 - putative PTS system enzyme IIC component 1603 52.91 0 1717689..1718495 + 268 62180181 sgcQ SC1611 - putative nucleoside triphosphatase 1604 57.31 0 1718627..1719064 + 145 62180182 sgcA SC1612 - putative sugar specific PTS enzyme II 1605 56.40 0 1719076..1719708 + 210 62180183 sgcE SC1613 - ribulose-phosphate 3-epimerase 1606 51.39 0 1719724..1720515 + 263 62180184 sgcR SC1614 - DeoR family transcriptional regulator 1607 51.83 0 1720515..1720952 + 145 62180185 aac6 SC1615 - cryptic aminoglycoside resistance gene 1608 48.13 0 1720999..1722201 - 400 62180186 gox SC1616 - putative oxidase 1609 42.71 -1 1722213..1722788 - 191 62180187 yceI SC1617 - putative periplasmic protein 1610 54.37 0 1722984..1724699 - 571 62180188 mdoD SC1618 - glucan biosynthesis protein D 1611 54.24 0 1726416..1727759 - 447 62180189 ydcj SC1619 - putative cytoplasmic protein 1612 53.58 0 1727983..1728975 + 330 62180190 ydcI SC1620 - LysR family transcriptional regulator 1613 54.00 0 1729036..1730661 - 541 62180191 trg SC1621 - methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor 1614 53.17 0 1730830..1731948 - 372 62180192 adh3 SC1622 - alcohol dehydrogenase class III 1615 48.29 0 1731980..1732360 - 126 62180193 yohL SC1623 - putative cytoplasmic protein 1616 41.54 -1 1732778..1733179 + 133 62180194 dpr SC1624 - putative dipicolinate reductase 1617 41.87 -1 1733607..1733969 - 120 62180195 tfpB SC1625 - putative inner membrane protein 1618 39.12 -2 1734452..1735678 + 408 62180196 sseJ SC1626 - translocated effector: regulated by SPI-2 1619 46.96 0 1735799..1736143 - 114 62180197 - SC1627 - putative inner membrane protein 1620 41.99 -1 1737050..1737280 + 76 62180198 - SC1628 - putative periplasmic binding protein 1621 41.98 -1 1737817..1738464 + 215 62180199 yckA SC1629 - putative amino acid ABC transporter permease component 1622 43.99 -1 1738489..1739220 + 243 62180200 gltL SC1630 - putative ABC-type polar amino acid transport system, ATPase component 1623 43.32 -1 1739217..1739897 + 226 62180201 - SC1631 - putative ABC-type transport system membrane spanning protein 1624 48.10 0 1740034..1740534 + 166 62180202 - SC1632 - putative inner membrane protein 1625 46.67 0 1740813..1740962 + 49 62180203 - SC1633 - hypothetical protein 1626 46.61 0 1742046..1742708 + 220 62180204 ybcY SC1634 - putative SAM-dependent methyltransferase 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0