version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1451 56.32 0 1553739..1554260 + 173 62180029 sodC SC1459 - superoxide dismutase 1452 55.59 0 1554253..1556274 - 673 62180030 ydhK SC1460 - hypothetical protein 1453 50.28 0 1556274..1557176 - 300 62180031 ydhJ SC1461 - putative multidrug resistance efflux pump 1454 48.97 0 1557574..1558008 + 144 62180032 slyA SC1462 - transcriptional regulator SlyA 1455 54.41 0 1558056..1558520 - 154 62180033 slyB SC1463 - putative outer membrane lipoprotein 1456 57.13 0 1558792..1559913 + 373 62180034 anmK SC1464 - anhydro-N-acetylmuramic acid kinase 1457 45.76 -1 1560001..1560330 + 109 62180035 ydhA SC1465 - lysozyme inhibitor 1458 55.10 0 1560389..1561045 + 218 62180036 pdxH SC1466 - pyridoxamine 5'-phosphate oxidase 1459 53.18 0 1561172..1562446 + 424 62180037 tyrS SC1467 - tyrosyl-tRNA synthetase 1460 54.70 0 1562506..1563366 + 286 62180038 pdxY SC1468 - pyridoxamine kinase 1461 51.98 0 1563425..1564030 - 201 62180039 gst SC1469 - glutathionine S-transferase 1462 53.39 0 1564135..1565640 - 501 62180040 tppB SC1470 - putative tripeptide transporter permease 1463 51.42 0 1566241..1566876 - 211 62180041 nth SC1471 - endonuclease III 1464 53.68 0 1566876..1567568 - 230 62180042 ydgQ SC1472 - SoxR-reducing system protein RsxE 1465 52.17 0 1567571..1568191 - 206 62180043 ydgP SC1473 - electron transport complex protein RnfG 1466 56.00 0 1568195..1569253 - 352 62180044 rnfD SC1474 - electron transport complex protein RnfD 1467 59.39 +1 1569254..1571368 - 704 62180045 rnfC SC1475 - electron transport complex protein RnfC 1468 55.79 0 1571361..1571939 - 192 62180046 rnfB SC1476 - electron transport complex protein RnfB 1469 50.34 0 1571939..1572520 - 193 62180047 rnfA SC1477 - Na(+)-translocating NADH-quinone reductase subunit E 1470 51.47 0 1572597..1573037 - 146 62180048 ydgK SC1478 - hypothetical protein 1471 41.75 -1 1573126..1573410 - 94 62180049 ydgT SC1479 - oriC-binding nucleoid-associated protein 1472 55.42 0 1575087..1576100 - 337 62180050 add SC1480 - adenosine deaminase 1473 57.58 0 1576305..1576700 - 131 62180051 malY SC1481 - MalY protein 1474 57.70 0 1576710..1577300 + 196 62180052 malI SC1482 - maltose regulon regulatory protein malI 1475 52.29 0 1577358..1578866 - 502 62180053 ydgA SC1483 - hypothetical protein 1476 55.09 0 1578969..1580048 - 359 62180054 manA SC1484 - mannose-6-phosphate isomerase 1477 54.52 0 1580344..1581990 + 548 62180055 fumA SC1485 - fumarase A (fumarate hydratase class I), aerobic isozyme 1478 55.34 0 1582158..1583561 + 467 62180056 fumC SC1486 - fumarate hydratase 1479 52.90 0 1583558..1584487 - 309 62180057 tus SC1487 - DNA replication terminus site-binding protein 1480 54.07 0 1584563..1585864 - 433 62180058 rstB SC1488 - sensor protein RstB 1481 57.03 0 1585976..1587676 - 566 62180059 - SC1489 - putative periplasmic protein 1482 47.71 0 1587835..1588968 - 377 62180060 ompN SC1490 - outer membrane protein N, non-specific porin 1483 28.46 -2 1589025..1589270 + 81 62180061 - SC1491 - hypothetical protein 1484 37.85 -2 1589233..1589409 - 58 62180062 - SC1492 - hypothetical protein 1485 53.28 0 1589448..1590179 - 243 62180063 rstA SC1493 - DNA-binding transcriptional regulator RstA 1486 50.60 0 1590306..1590641 + 111 62180064 ydgC SC1494 - hypothetical protein 1487 54.01 0 1590703..1592085 - 460 62180065 ydgI SC1495 - putative amino acid transporter 1488 53.44 0 1592384..1593328 - 314 62180066 ydgH SC1496 - hypothetical protein 1489 54.77 0 1593855..1595384 + 509 62180067 pntA SC1497 - NAD(P) transhydrogenase subunit alpha 1490 54.72 0 1595395..1596783 + 462 62180068 pntB SC1498 - pyridine nucleotide transhydrogenase 1491 45.61 -1 1598127..1598297 + 56 62180069 - SC1499 - hypothetical protein 1492 44.63 -1 1598409..1598771 + 120 62180070 ydgF SC1500 - multidrug efflux system protein MdtJ 1493 55.76 0 1598758..1599087 + 109 62180071 ydgE SC1501 - multidrug efflux system protein MdtI 1494 56.81 0 1599127..1599948 - 273 62180072 ydgD SC1502 - putative protease 1495 50.60 0 1600217..1600465 - 82 162139590 asr SC1503 - acid shock protein precursor 1496 55.02 0 1600860..1602113 - 417 62180074 ynfM SC1504 - putative MFS familty transport protein 1497 57.22 0 1602233..1603132 + 299 62180075 ynfL SC1505 - LysR family transcriptional regulator 1498 52.01 0 1603260..1604480 + 406 62180076 mlc SC1506 - ptsG and ptsHI transcriptional repressor 1499 52.16 0 1604605..1605300 + 231 62180077 bioD SC1507 - putative dithiobiotin synthetase 1500 52.74 0 1606681..1607829 - 382 62180078 opbA SC1508 - ABC-type proline/glycine betaine transport systems, ATPase component 1501 55.25 0 1607829..1608476 - 215 62180079 opcB SC1509 - putative binding-protein-dependent transport system, inner membrane component 1502 52.27 0 1608486..1609388 - 300 62180080 opcC SC1510 - putative periplasmic component, ABC transport system 1503 54.43 0 1609417..1610127 - 236 62180081 yehW SC1511 - ABC-type transport systems, permease components 1504 54.31 0 1610432..1611046 - 204 62180082 ynfI SC1512 - twin-argninine leader-binding protein DmsD 1505 56.88 0 1611089..1611946 - 285 62180083 ynfH SC1513 - putative dimethylsulfoxide reductase 1506 60.05 +1 1611948..1612370 - 140 62180084 dmsB SC1514 - anaerobic dimethyl sulfoxide reductase, subunit B 1507 55.01 0 1612578..1615013 - 811 62180085 ynfF SC1515 - putative dimethyl sulphoxide reductase 1508 54.22 0 1615112..1617553 - 813 62180086 ynfE SC1516 - putative dimethyl sulphoxide reductase, chain A1 1509 55.02 0 1617707..1618015 - 102 62180087 ynfD SC1517 - putative outer membrane protein 1510 50.35 0 1618119..1618829 + 236 162139589 ynfC SC1518 - hypothetical protein 1511 48.13 0 1618870..1619430 - 186 62180089 speG SC1519 - spermidine N1-acetyltransferase 1512 52.34 0 1619466..1619807 - 113 62180090 ynfB SC1520 - hypothetical protein 1513 56.55 0 1619950..1620285 + 111 162139588 ynfA SC1521 - hypothetical protein 1514 54.65 0 1620407..1621621 + 404 62180092 rspA SC1522 - putative dehydratase, starvation sensing protein 1515 51.27 0 1621632..1622651 + 339 62180093 rspB SC1523 - putative dehydrogenase 1516 50.00 0 1622705..1624216 + 503 62180094 ydfJ SC1524 - putative membrane transport protein 1517 55.90 0 1624227..1625693 + 488 62180095 ydfI SC1525 - putative mannitol dehydrogenase 1518 51.69 0 1625760..1626026 - 88 62180096 ydfZ SC1526 - hypothetical protein 1519 50.66 0 1626144..1626830 - 228 62180097 ydfH SC1527 - GntR family transcriptional regulator 1520 53.28 0 1626960..1627706 - 248 62180098 ydfG SC1528 - 3-hydroxy acid dehydrogenase 1521 53.70 0 1627845..1629887 + 680 62180099 dcp SC1529 - dipeptidyl carboxypeptidase II 1522 46.15 -1 1630180..1630413 + 77 62180100 yciG SC1530 - putative cytoplasmic protein 1523 47.47 0 1630285..1630482 - 65 62180101 yciF SC1531 - hypothetical protein 1524 48.48 0 1630533..1631060 - 175 62180102 ydeJ SC1532 - competence damage-inducible protein A 1525 47.07 0 1631487..1631879 + 130 62180103 ydeI SC1533 - hypothetical protein 1526 51.80 0 1632553..1633749 - 398 62180104 ydeE SC1534 - putative MFS-type transporter YdeE 1527 53.38 0 1633977..1634879 + 300 62180105 ydeD SC1535 - O-acetylserine/cysteine export protein 1528 50.00 0 1634998..1635255 - 85 62180106 marB SC1536 - hypothetical protein 1529 46.61 0 1635242..1635625 - 127 62180107 marA SC1537 - DNA-binding transcriptional activator MarA 1530 48.05 0 1635645..1636079 - 144 62180108 marR SC1538 - DNA-binding transcriptional repressor MarR 1531 53.45 0 1636338..1637003 + 221 62180109 marC SC1539 - multiple drug resistance protein MarC 1532 53.06 0 1637050..1638240 - 396 62180110 ydeA SC1540 - sugar efflux transporter 1533 56.80 0 1639331..1640719 + 462 62180111 yneI SC1541 - putative succinate-semialdehyde dehydrogenase 1534 54.58 0 1640792..1641718 + 308 62180112 yneH SC1542 - glutaminase 1535 54.44 0 1641718..1642077 + 119 62180113 yneG SC1543 - hypothetical protein 1536 45.57 -1 1642301..1643248 + 315 62180114 yneE SC1544 - putative inner membrane protein 1537 48.99 0 1643304..1643846 - 180 62180115 - SC1545 - putative outer membrane protein 1538 43.43 -1 1643734..1643931 - 65 62180116 - SC1546 - hypothetical protein 1539 46.02 -1 1644563..1645681 + 372 62180117 ompC SC1547 - putative outer membrane protein 1540 50.29 0 1645822..1646163 - 113 62180118 hybF SC1548 - putative hydrogenase 1541 54.14 0 1646176..1646997 - 273 62180119 hupK SC1549 - putative dehydrogenase protein 1542 50.00 0 1647051..1648112 - 353 62180120 hoxQ SC1550 - putative hydrogenase 1543 53.04 0 1648130..1648540 - 136 62180121 hyaE SC1551 - putative hydrogenase 1544 56.33 0 1648537..1648836 - 99 62180122 hupF SC1552 - putative hydrogenase protein 1545 53.04 0 1648836..1649444 - 202 62180123 hupD SC1553 - putative hydrogenase maturation protease 1546 51.11 0 1649450..1650124 - 224 62180124 cybH SC1554 - putative Ni/Fe-hydrogenase 1 b-type cytochrome subunit 1547 53.73 0 1650144..1650947 - 267 62180125 mbhL SC1555 - putative hydrogenase-1 large subunit 1548 51.52 0 1650950..1651279 - 109 62180126 mbhS SC1556 - putative hydrogenase-1 small subunit 1549 44.31 -1 1651177..1651686 - 169 62180127 pqaA SC1557 - PhoPQ-regulated protein 1550 50.00 0 1652035..1652172 - 45 62180128 - SC1558 - putative multidrug efflux protein 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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