version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1406 41.54 -1 1517742..1518143 + 133 62179984 ssaB SC1414 - secretion system apparatus SsaB 1407 42.17 -1 1518145..1519638 + 497 62179985 ssaC SC1415 - secretion system apparatus SsaC 1408 43.32 -1 1519619..1520830 + 403 62179986 ssaD SC1416 - secretion system apparatus SsaD 1409 42.39 -1 1520838..1521080 + 80 62179987 ssaE SC1417 - secretion system effector SsaE 1410 41.28 -1 1521289..1521615 + 108 62179988 sseA SC1418 - secretion system effector SseA 1411 43.49 -1 1521622..1522212 + 196 62179989 sseB SC1419 - secretion system effector SseB 1412 50.00 0 1522209..1522682 + 157 62179990 - SC1420 - secretion system chaparone SscA 1413 45.91 -1 1522685..1524139 + 484 62179991 sseC SC1421 - secretion system effector SseC 1414 48.81 0 1524155..1524742 + 195 62179992 sseD SC1422 - secretion system effector SseD 1415 45.32 -1 1524745..1525161 + 138 62179993 sseE SC1423 - secretion system effector SseE 1416 47.59 0 1525213..1525647 + 144 62179994 - SC1424 - secretion system chaparone SscB 1417 49.04 0 1525663..1526445 + 260 62179995 sseF SC1425 - secretion system effector SseF 1418 47.83 0 1526442..1527131 + 229 62179996 sseG SC1426 - secretion system effector SseG 1419 37.08 -2 1527174..1527440 + 88 62179997 ssaG SC1427 - secretion system apparatus SsaG 1420 43.64 -1 1527418..1527708 + 96 62179998 ssaH SC1428 - secretion system apparatus SsaH 1421 42.17 -1 1527720..1527968 + 82 62179999 ssaI SC1429 - secretion system apparatus SsaI 1422 41.87 -1 1527965..1528714 + 249 62180000 ssaJ SC1430 - secretion system apparatus SsaJ 1423 46.81 0 1528732..1529280 + 182 62180001 - SC1431 - putative cytoplasmic protein 1424 42.67 -1 1529277..1529951 + 224 62180002 ssaK SC1432 - secretion system apparatus SsaK 1425 45.62 -1 1529917..1530933 + 338 62180003 ssaL SC1433 - secretion system apparatus SsaL 1426 42.01 -1 1530991..1531359 + 122 62180004 ssaM SC1434 - secretion system apparatus SsaM 1427 46.63 0 1531344..1533389 + 681 62180005 ssaV SC1435 - secretion system apparatus protein SsaV 1428 51.08 0 1533379..1534680 + 433 62180006 ssaN SC1436 - type III secretion system ATPase 1429 43.52 -1 1534629..1535060 + 143 62180007 ssaO SC1437 - secretion system apparatus SsaO 1430 44.53 -1 1535041..1535415 + 124 62180008 ssaP SC1438 - secretion system apparatus SsaP 1431 45.72 -1 1535396..1536364 + 322 62180009 ssaQ SC1439 - type III secretion system protein 1432 43.06 -1 1536432..1537079 + 215 62180010 ssaR SC1440 - type III secretion system protein 1433 42.70 -1 1537076..1537342 + 88 62180011 ssaS SC1441 - secretion system apparatus SsaS 1434 38.97 -2 1537343..1538122 + 259 62180012 ssaT SC1442 - secretion system apparatus SsaT 1435 39.66 -2 1538119..1539177 + 352 62180013 ssaU SC1443 - secretion system apparatus protein SsaU 1436 53.57 0 1539650..1541023 - 457 62180014 ydhE SC1444 - multidrug efflux protein 1437 51.09 0 1541240..1541881 + 213 62180015 ribE SC1445 - riboflavin synthase subunit alpha 1438 48.56 0 1541923..1543071 - 382 62180016 cfa SC1446 - cyclopropane fatty acyl phospholipid synthase 1439 55.06 0 1543361..1544566 - 401 62180017 ydhC SC1447 - inner membrane transport protein YdhC 1440 56.91 0 1544679..1545611 + 310 62180018 ydhB SC1448 - putative DNA-binding transcriptional regulator 1441 54.58 0 1545608..1546633 - 341 62180019 purR SC1449 - DNA-binding transcriptional repressor PurR 1442 51.37 0 1547101..1547682 - 193 62180020 sodB SC1450 - superoxide dismutase 1443 51.23 0 1547809..1548663 - 284 62180021 ydhO SC1451 - putative cell wall-associated hydrolase 1444 50.86 0 1548966..1549313 + 115 62180022 ydhD SC1452 - hypothetical protein 1445 53.70 0 1549391..1550038 - 215 62180023 rnt SC1453 - ribonuclease T 1446 51.96 0 1550139..1550546 - 135 62180024 gloA SC1454 - glyoxalase I 1447 57.38 0 1550615..1551712 - 365 62180025 nemA SC1455 - N-ethylmaleimide reductase 1448 55.87 0 1551771..1552307 - 178 62180026 ydhM SC1456 - TetR/AcrR family transcriptional regulator 1449 51.25 0 1552473..1552712 + 79 62180027 ydhL SC1457 - putative oxidoreductase 1450 52.29 0 1552763..1553659 + 298 62180028 ydhF SC1458 - putative aldo/keto reductase 1451 56.32 0 1553739..1554260 + 173 62180029 sodC SC1459 - superoxide dismutase 1452 55.59 0 1554253..1556274 - 673 62180030 ydhK SC1460 - hypothetical protein 1453 50.28 0 1556274..1557176 - 300 62180031 ydhJ SC1461 - putative multidrug resistance efflux pump 1454 48.97 0 1557574..1558008 + 144 62180032 slyA SC1462 - transcriptional regulator SlyA 1455 54.41 0 1558056..1558520 - 154 62180033 slyB SC1463 - putative outer membrane lipoprotein 1456 57.13 0 1558792..1559913 + 373 62180034 anmK SC1464 - anhydro-N-acetylmuramic acid kinase 1457 45.76 -1 1560001..1560330 + 109 62180035 ydhA SC1465 - lysozyme inhibitor 1458 55.10 0 1560389..1561045 + 218 62180036 pdxH SC1466 - pyridoxamine 5'-phosphate oxidase 1459 53.18 0 1561172..1562446 + 424 62180037 tyrS SC1467 - tyrosyl-tRNA synthetase 1460 54.70 0 1562506..1563366 + 286 62180038 pdxY SC1468 - pyridoxamine kinase 1461 51.98 0 1563425..1564030 - 201 62180039 gst SC1469 - glutathionine S-transferase 1462 53.39 0 1564135..1565640 - 501 62180040 tppB SC1470 - putative tripeptide transporter permease 1463 51.42 0 1566241..1566876 - 211 62180041 nth SC1471 - endonuclease III 1464 53.68 0 1566876..1567568 - 230 62180042 ydgQ SC1472 - SoxR-reducing system protein RsxE 1465 52.17 0 1567571..1568191 - 206 62180043 ydgP SC1473 - electron transport complex protein RnfG 1466 56.00 0 1568195..1569253 - 352 62180044 rnfD SC1474 - electron transport complex protein RnfD 1467 59.39 +1 1569254..1571368 - 704 62180045 rnfC SC1475 - electron transport complex protein RnfC 1468 55.79 0 1571361..1571939 - 192 62180046 rnfB SC1476 - electron transport complex protein RnfB 1469 50.34 0 1571939..1572520 - 193 62180047 rnfA SC1477 - Na(+)-translocating NADH-quinone reductase subunit E 1470 51.47 0 1572597..1573037 - 146 62180048 ydgK SC1478 - hypothetical protein 1471 41.75 -1 1573126..1573410 - 94 62180049 ydgT SC1479 - oriC-binding nucleoid-associated protein 1472 55.42 0 1575087..1576100 - 337 62180050 add SC1480 - adenosine deaminase 1473 57.58 0 1576305..1576700 - 131 62180051 malY SC1481 - MalY protein 1474 57.70 0 1576710..1577300 + 196 62180052 malI SC1482 - maltose regulon regulatory protein malI 1475 52.29 0 1577358..1578866 - 502 62180053 ydgA SC1483 - hypothetical protein 1476 55.09 0 1578969..1580048 - 359 62180054 manA SC1484 - mannose-6-phosphate isomerase 1477 54.52 0 1580344..1581990 + 548 62180055 fumA SC1485 - fumarase A (fumarate hydratase class I), aerobic isozyme 1478 55.34 0 1582158..1583561 + 467 62180056 fumC SC1486 - fumarate hydratase 1479 52.90 0 1583558..1584487 - 309 62180057 tus SC1487 - DNA replication terminus site-binding protein 1480 54.07 0 1584563..1585864 - 433 62180058 rstB SC1488 - sensor protein RstB 1481 57.03 0 1585976..1587676 - 566 62180059 - SC1489 - putative periplasmic protein 1482 47.71 0 1587835..1588968 - 377 62180060 ompN SC1490 - outer membrane protein N, non-specific porin 1483 28.46 -2 1589025..1589270 + 81 62180061 - SC1491 - hypothetical protein 1484 37.85 -2 1589233..1589409 - 58 62180062 - SC1492 - hypothetical protein 1485 53.28 0 1589448..1590179 - 243 62180063 rstA SC1493 - DNA-binding transcriptional regulator RstA 1486 50.60 0 1590306..1590641 + 111 62180064 ydgC SC1494 - hypothetical protein 1487 54.01 0 1590703..1592085 - 460 62180065 ydgI SC1495 - putative amino acid transporter 1488 53.44 0 1592384..1593328 - 314 62180066 ydgH SC1496 - hypothetical protein 1489 54.77 0 1593855..1595384 + 509 62180067 pntA SC1497 - NAD(P) transhydrogenase subunit alpha 1490 54.72 0 1595395..1596783 + 462 62180068 pntB SC1498 - pyridine nucleotide transhydrogenase 1491 45.61 -1 1598127..1598297 + 56 62180069 - SC1499 - hypothetical protein 1492 44.63 -1 1598409..1598771 + 120 62180070 ydgF SC1500 - multidrug efflux system protein MdtJ 1493 55.76 0 1598758..1599087 + 109 62180071 ydgE SC1501 - multidrug efflux system protein MdtI 1494 56.81 0 1599127..1599948 - 273 62180072 ydgD SC1502 - putative protease 1495 50.60 0 1600217..1600465 - 82 162139590 asr SC1503 - acid shock protein precursor 1496 55.02 0 1600860..1602113 - 417 62180074 ynfM SC1504 - putative MFS familty transport protein 1497 57.22 0 1602233..1603132 + 299 62180075 ynfL SC1505 - LysR family transcriptional regulator 1498 52.01 0 1603260..1604480 + 406 62180076 mlc SC1506 - ptsG and ptsHI transcriptional repressor 1499 52.16 0 1604605..1605300 + 231 62180077 bioD SC1507 - putative dithiobiotin synthetase 1500 52.74 0 1606681..1607829 - 382 62180078 opbA SC1508 - ABC-type proline/glycine betaine transport systems, ATPase component 1501 55.25 0 1607829..1608476 - 215 62180079 opcB SC1509 - putative binding-protein-dependent transport system, inner membrane component 1502 52.27 0 1608486..1609388 - 300 62180080 opcC SC1510 - putative periplasmic component, ABC transport system 1503 54.43 0 1609417..1610127 - 236 62180081 yehW SC1511 - ABC-type transport systems, permease components 1504 54.31 0 1610432..1611046 - 204 62180082 ynfI SC1512 - twin-argninine leader-binding protein DmsD 1505 56.88 0 1611089..1611946 - 285 62180083 ynfH SC1513 - putative dimethylsulfoxide reductase 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0