version 1.0
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome - 1..4755700 4413 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1254 45.44 -1 1367132..1367602 + 156 62179832 ibp SC1262 - putative molecular chaperone (small heat shock protein) 1255 48.67 0 1367711..1367860 - 49 62179833 - SC1263 - putative inner membrane protein 1256 50.38 0 1367941..1368984 + 347 62179834 - SC1264 - hypothetical protein 1257 46.78 0 1369069..1369596 - 175 62179835 - SC1265 - putative inner membrane protein 1258 41.59 -1 1369745..1370059 - 104 62179836 - SC1266 - putative outer membrane lipoprotein 1259 54.11 0 1370741..1372381 + 546 62179837 oxd6A SC1267 - putative ABC transporter periplasmic binding protein 1260 52.86 0 1372378..1373355 + 325 62179838 oxd6B SC1268 - putative ABC transporter 1261 56.21 0 1373345..1374157 + 270 62179839 oxd6C SC1269 - putative ABC transporter 1262 54.89 0 1374151..1374948 + 265 62179840 oxd6D SC1270 - ABC transporter ATPase 1263 56.85 0 1374942..1375532 + 196 62179841 - SC1271 - ABC transporter ATPase 1264 49.03 0 1375614..1376747 - 377 62179842 oxd6E SC1272 - hypothetical protein 1265 52.29 0 1376941..1377267 + 108 62179843 - SC1273 - hypothetical protein 1266 46.39 0 1377461..1378111 + 216 62179844 yodA SC1274 - hypothetical protein 1267 54.50 0 1378220..1379008 + 262 62179845 aadA SC1275 - aminoglycoside resistance protein 1268 36.88 -2 1379099..1379746 + 215 62179846 - SC1276 - response regulator 1269 46.29 -1 1379815..1380663 + 282 62179847 ycgE SC1277 - putative transcriptional regulator 1270 38.55 -2 1380918..1381166 - 82 62179848 - SC1278 - hypothetical protein 1271 47.07 0 1381482..1382027 + 181 62179849 - SC1279 - chorismate mutase 1272 46.95 0 1382224..1382862 + 212 62179850 yeaS SC1280 - leucine export protein LeuE 1273 50.96 0 1383035..1383397 + 120 62179851 yeaR SC1281 - hypothetical protein 1274 48.09 0 1383400..1383582 + 60 62179852 yoaG SC1282 - putative cytoplasmic protein 1275 50.00 0 1383812..1384453 + 213 62179853 nor SC1283 - hypothetical protein 1276 37.10 -2 1384574..1384759 + 61 62179854 - SC1284 - hypothetical protein 1277 46.18 -1 1384767..1385015 + 82 62179855 yeaQ SC1285 - hypothetical protein 1278 55.56 0 1385448..1385699 + 83 62179856 yaoF SC1286 - putative hemolysin 1279 56.09 0 1385768..1386079 + 103 62179857 - SC1287 - hypothetical protein 1280 51.72 0 1386065..1386412 - 115 62179858 yeaO SC1288 - putative cytoplasmic protein 1281 58.31 +1 1386531..1387715 - 394 62179859 yeaN SC1289 - MFS family transporter 1282 55.09 0 1387816..1388610 + 264 62179860 yeaM SC1290 - AraC family helix-turn-helix transcriptional regulator 1283 56.82 0 1388590..1389036 - 148 62179861 yeaL SC1291 - hypothetical protein 1284 43.14 -1 1389023..1389175 + 50 62179862 - SC1292 - hypothetical protein 1285 42.03 -1 1389206..1389343 + 45 62179863 - SC1293 - putative inner membrane protein 1286 54.92 0 1389340..1389867 - 175 62179864 yeaK SC1294 - hypothetical protein 1287 45.11 -1 1389908..1391401 - 497 62179865 yeaJ SC1295 - methyl-accepting chemotaxis protein 1288 51.67 0 1392042..1393328 - 428 62179866 yeaH SC1296 - hypothetical protein 1289 50.38 0 1393451..1395415 - 654 62179867 yeaG SC1297 - hypothetical protein 1290 50.87 0 1395812..1396558 + 248 62179868 mipA SC1298 - scaffolding protein for murein-synthesizing holoenzyme 1291 50.04 0 1396848..1398044 + 398 62179869 chuR SC1299 - arylsulfatase regulator 1292 55.24 0 1398141..1398998 + 285 62179870 yeaE SC1300 - putative aldehyde reductase 1293 52.54 0 1399097..1399981 - 294 62179871 yeaD SC1301 - putative enzyme related to aldose 1-epimerase 1294 50.16 0 1399981..1400295 - 104 62179872 - SC1302 - hypothetical protein 1295 50.95 0 1400314..1401318 - 334 62179873 gapA SC1303 - glyceraldehyde-3-phosphate dehydrogenase 1296 51.13 0 1401621..1402064 + 147 62179874 yeaA SC1304 - methionine sulfoxide reductase B 1297 50.18 0 1402106..1402384 + 92 62179875 yeaC SC1305 - hypothetical protein 1298 51.08 0 1402772..1403002 - 76 62179876 - SC1306 - hypothetical protein 1299 52.92 0 1403277..1404353 + 358 62179877 ydjL SC1307 - hypothetical protein 1300 52.61 0 1404380..1405759 + 459 62179878 ydjK SC1308 - metabolite transport protein 1301 50.00 0 1405770..1406813 + 347 62179879 ydiJ SC1309 - hypothetical protein 1302 49.82 0 1406835..1407671 + 278 62179880 ydjI SC1310 - hypothetical protein 1303 47.21 0 1407622..1408623 + 333 62179881 ydjH SC1311 - putative sugar kinase ydjH 1304 52.35 0 1408639..1409616 + 325 62179882 ydjG SC1312 - oxidoreductase ydjG 1305 42.16 -1 1409746..1410504 + 252 62179883 ydjF SC1313 - putative transcriptional regulator YdjF 1306 46.50 0 1410640..1411998 + 452 62179884 ydjE SC1314 - metabolite transport protein 1307 57.05 0 1412134..1412757 - 207 62179885 pncA SC1315 - nicotinamidase/pyrazinamidase 1308 52.53 0 1412784..1413872 - 362 62179886 ansA SC1316 - cytoplasmic asparaginase I 1309 55.95 0 1413896..1415752 - 618 62179887 sppA SC1317 - protease 4 1310 56.70 0 1415926..1416477 + 183 62179888 ydjA SC1318 - hypothetical protein 1311 57.57 0 1416595..1417638 + 347 62179889 selD SC1319 - selenophosphate synthetase 1312 56.35 0 1417586..1419592 + 668 62179890 topB SC1320 - DNA topoisomerase III 1313 57.89 +1 1419622..1420965 - 447 62179891 gdhA SC1321 - glutamate dehydrogenase 1314 54.71 0 1421204..1421479 + 91 62179892 ynjH SC1322 - putative periplasmic protein 1315 57.79 +1 1421439..1421855 - 138 62179893 nudG SC1323 - pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 1316 52.66 0 1421928..1422734 - 268 62179894 xthA SC1324 - exonuclease III 1317 38.89 -2 1422869..1423048 + 59 62179895 - SC1325 - hypothetical protein 1318 55.83 0 1423180..1424406 + 408 62179896 argD SC1326 - bifunctional succinylornithine transaminase/acetylornithine transaminase 1319 54.29 0 1424397..1425923 + 508 62179897 astA SC1327 - arginine succinyltransferase 1320 58.31 +1 1425916..1426884 + 322 62179898 astE SC1328 - succinylglutamate desuccinylase 1321 50.00 0 1427220..1427705 + 161 62179899 spy SC1329 - periplasmic protein 1322 55.12 0 1427780..1428688 - 302 62179900 cho SC1330 - nucleotide excision repair endonuclease 1323 53.02 0 1428782..1429609 - 275 62179901 nadE SC1331 - NAD synthetase 1324 50.88 0 1429828..1430169 + 113 62179902 osmE SC1332 - DNA-binding transcriptional activator OsmE 1325 46.42 0 1430470..1430790 + 106 62179903 celA SC1333 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB 1326 50.77 0 1430873..1432231 + 452 62179904 celB SC1334 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC 1327 48.85 0 1432282..1432629 + 115 62179905 celC SC1335 - N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA 1328 43.42 -1 1432640..1433482 + 280 62179906 celD SC1336 - DNA-binding transcriptional regulator ChbR 1329 48.16 0 1433607..1434962 + 451 62179907 celF SC1337 - phospho-beta-glucosidase (cellobiose-6-phosphate hydrolase) 1330 53.75 0 1434975..1435733 + 252 62179908 celG SC1338 - hypothetical protein 1331 54.19 0 1435777..1438029 - 750 62179909 katE SC1339 - hydroperoxidase II 1332 51.85 0 1438394..1438636 + 80 62179910 cedA SC1340 - cell division modulator 1333 54.53 0 1438739..1440130 - 463 62179911 ydjN SC1341 - hypothetical protein 1334 53.74 0 1440267..1440854 - 195 162139593 ydjM SC1342 - hypothetical protein 1335 55.01 0 1441004..1441672 - 222 62179913 yniC SC1343 - 2-deoxyglucose-6-phosphatase 1336 45.81 -1 1441821..1442357 + 178 62179914 yniB SC1344 - hypothetical protein 1337 54.12 0 1442400..1443260 - 286 62179915 yniA SC1345 - hypothetical protein 1338 48.45 0 1443367..1443657 - 96 62179916 ydiZ SC1346 - hypothetical protein 1339 57.45 0 1443754..1444686 - 310 62179917 pfkB SC1347 - 6-phosphofructokinase 2 1340 50.33 0 1444975..1445733 + 252 62179918 ydiY SC1348 - putative salt-induced outer membrane protein 1341 47.29 0 1445782..1446741 - 319 62179919 - SC1349 - putative outer membrane protein 1342 33.33 -2 1446881..1446976 - 31 62179920 - SC1350 - hypothetical protein 1343 50.76 0 1447194..1448048 + 284 62179921 nucA SC1351 - putative DNA/RNA non-specific endonuclease 1344 50.80 0 1448308..1450236 + 642 62179922 thrS SC1352 - threonyl-tRNA synthetase 1345 47.13 0 1450348..1450782 + 144 62179923 infC SC1353 - translation initiation factor IF-3 1346 48.99 0 1450878..1451075 + 65 162139592 rpmI SC1354 - 50S ribosomal protein L35 1347 49.86 0 1451126..1451482 + 118 62179925 rplT SC1355 - 50S ribosomal protein L20 1348 53.66 0 1451784..1452767 + 327 62179926 pheS SC1356 - phenylalanyl-tRNA synthetase subunit alpha 1349 53.43 0 1452783..1455170 + 795 62179927 pheT SC1357 - phenylalanyl-tRNA synthetase subunit beta 1350 48.33 0 1455175..1455474 + 99 62179928 ihfA SC1358 - integration host factor subunit alpha 1351 59.12 +1 1455677..1456657 + 326 62179929 btuC SC1359 - vtamin B12-transporter permease 1352 49.64 0 1456749..1457300 + 183 62179930 btuE SC1360 - putative glutathione peroxidase 1353 56.40 0 1457300..1458049 + 249 62179931 btuD SC1361 - vitamin B12-transporter ATPase 52.01 MEAN 5.72 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0