version 1.0
Rickettsia felis URRWXCal2, complete genome - 1..1485148 1400 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 479 33.24 0 512704..513810 - 368 67458871 - RF_0479 - hypothetical protein 480 22.71 -2 513992..514876 + 294 67458872 - RF_0480 - hypothetical protein 481 28.96 0 514860..515705 + 281 67458873 - RF_0481 - hypothetical protein 482 34.62 0 515934..516710 + 258 67458874 cysQ RF_0482 - 3'(2'),5'-bisphosphate nucleotidase 483 33.71 0 516886..519546 - 886 67458875 mutS RF_0483 - DNA mismatch repair protein 484 26.59 -1 519606..519857 - 83 67458876 - RF_0484 - hypothetical protein 485 28.71 0 519809..520630 - 273 67458877 - RF_0485 - hypothetical protein 486 31.51 0 520697..521134 - 145 67458878 lacA RF_0486 - ribose-5-phosphate isomerase B 487 31.84 0 521186..521854 + 222 67458879 nlpD1 RF_0487 - membrane proteins related to metalloendopeptidase 488 30.58 0 521855..522544 + 229 67458880 - RF_0488 - metal-dependent hydrolase 489 27.50 -1 522563..522802 + 79 67458881 - RF_0489 - antitoxin of toxin-antitoxin stability system 490 25.09 -1 522808..523074 + 88 67458882 - RF_0490 - toxin of toxin-antitoxin system 491 36.38 +1 523092..523976 + 294 67458883 thyX RF_0491 - FAD-dependent thymidylate synthase 492 37.30 +1 524171..525505 + 444 67458884 tolB RF_0492 - translocation protein TolB 493 32.65 0 525904..526785 - 293 67458885 rpoH RF_0493 - RNA polymerase factor sigma-32 494 31.91 0 526871..527434 + 187 67458886 cox11 RF_0494 - cytochrome C oxidase assembly protein 495 31.53 0 527459..528511 - 350 67458887 - RF_0495 - hypothetical protein 496 40.71 +2 528722..529819 + 365 67458888 trmU RF_0496 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 497 35.12 0 529988..531385 + 465 67458889 atrC1 RF_0497 - cationic amino acid transporter-1 498 34.78 0 531673..532920 + 415 67458890 hisS RF_0498 - histidyl-tRNA synthetase 499 29.78 0 532984..533715 + 243 67458891 - RF_0499 - ABC transporter ATP-binding protein 500 31.15 0 533782..534606 + 274 67458892 - RF_0500 - ABC transporter ATP-binding protein 501 29.07 0 535407..536156 - 249 67458893 - RF_0501 - hypothetical protein 502 28.06 -1 536300..537058 - 252 67458894 - RF_0502 - hypothetical protein 503 25.41 -1 537798..538403 - 201 67458895 - RF_0503 - hypothetical protein 504 36.21 +1 538786..539514 + 242 67458896 tolQ RF_0504 - TolQ protein 505 36.11 +1 539514..539945 + 143 67458897 tolR RF_0505 - TolR protein 506 34.55 0 539935..540918 + 327 67458898 - RF_0506 - periplasmic protein TonB 507 28.40 0 541448..542299 - 283 67458899 - RF_0507 - hypothetical protein 508 27.64 -1 542439..543158 + 239 67458900 spoT2 RF_0508 - guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein 509 30.75 0 543109..544425 - 438 67458901 proP2 RF_0509 - proline/betaine transporter 510 33.46 0 544565..546100 - 511 67458902 aprE RF_0510 - alkaline protease secretion protein AprE 511 35.78 0 546302..548056 - 584 67458903 aprD RF_0511 - alkaline protease secretion ATP-binding protein AprD 512 33.04 0 548067..549083 - 338 67458904 asd RF_0512 - aspartate-semialdehyde dehydrogenase 513 28.89 0 549080..549439 - 119 67458905 pkcI RF_0513 - protein kinase C inhibitor 1 514 28.25 0 549574..549927 - 117 67458906 - RF_0514 - hypothetical protein 515 35.15 0 550319..550867 + 182 67458907 hslV RF_0515 - ATP-dependent protease peptidase subunit 516 35.03 0 550864..552216 + 450 67458908 hslU RF_0516 - ATP-dependent protease ATP-binding subunit 517 33.33 0 552379..552519 + 46 67458909 - RF_0517 - hypothetical protein 518 35.73 0 552665..553915 + 416 67458910 - RF_0518 - Mg chelatase-related protein 519 32.14 0 554105..555277 + 390 67458911 lpxB RF_0519 - lipid-A-disaccharide synthase 520 25.67 -1 555246..555545 - 99 67458912 - RF_0520 - hypothetical protein 521 30.69 0 555904..556923 + 339 67458913 - RF_0521 - hypothetical protein 522 29.41 0 557063..557368 + 101 67458914 cyaY RF_0522 - frataxin-like protein 523 30.13 0 557365..558114 + 249 67458915 - RF_0523 - hypothetical protein 524 31.25 0 558373..559140 + 255 67458916 - RF_0524 - hypothetical protein 525 30.01 0 559127..560029 + 300 67458917 - RF_0525 - hypothetical protein 526 30.94 0 560157..560741 + 194 67458918 bioY1 RF_0526 - BioY family protein 527 35.27 0 560751..561680 + 309 67458919 bioB RF_0527 - biotin synthase 528 37.88 +1 561893..562288 + 131 67458920 - RF_0528 - hypothetical protein 529 33.71 0 562734..564077 - 447 67458921 gltX RF_0529 - glutamyl-tRNA synthetase 530 35.05 0 564265..566595 - 776 67458922 topA RF_0530 - DNA topoisomerase I 531 33.42 0 566795..567943 - 382 67458923 dprA RF_0531 - putative DNA processing protein DprA 532 35.47 0 568114..568722 - 202 67458924 tdpX1 RF_0532 - thioredoxin peroxidase 1 533 36.32 +1 568798..569733 - 311 67458925 hflC1 RF_0533 - membrane protease subunit stomatin/prohibitin-like protein 534 28.81 0 570104..571672 - 522 67458926 - RF_0534 - hypothetical protein 535 31.83 0 571708..572172 + 154 67458927 - RF_0535 - Holliday junction resolvase-like protein 536 33.33 0 572451..572612 + 53 67458928 - RF_0536 - plasmid maintenance system antidote protein 537 21.67 -2 572700..572939 + 79 67458929 - RF_0537 - AbrB family transcriptional regulator 538 35.08 0 573036..573893 + 285 67458930 - RF_0538 - dTDP-4-dehydrorhamnose reductase 539 35.38 0 574092..575117 + 341 67458931 capD RF_0539 - CapD protein 540 36.24 +1 575110..576243 + 377 67458932 rffE RF_0540 - UDP-N-acetylglucosamine 2-epimerase 541 27.76 -1 576203..576955 + 250 67458933 - RF_0541 - hypothetical protein 542 27.35 -1 577562..578230 + 222 67458934 - RF_0542 - hypothetical protein 543 27.69 -1 578677..580485 + 602 67458935 - RF_0543 - glycosyltransferase 544 32.43 0 580490..581485 - 331 67458936 - RF_0544 - RND family efflux transporter MFP subunit 545 28.39 0 581921..582688 - 255 67458937 - RF_0545 - hypothetical protein 546 28.59 0 582698..583456 - 252 67458938 - RF_0546 - hydrolase or acyltransferase 547 32.74 0 583489..584661 + 390 67458939 - RF_0547 - glycosyltransferase 548 27.38 -1 584707..585495 - 262 67458940 - RF_0548 - ABC transporter, ATP-binding protein 549 34.79 0 586704..587321 - 205 162022123 rpsD RF_0549 - 30S ribosomal protein S4 550 33.01 0 587439..588356 + 305 67458942 cyoB RF_0550 - protoheme IX farnesyltransferase 551 31.74 0 588483..589358 - 291 67458943 - RF_0551 - putative lyase 552 27.71 -1 589474..589953 + 159 67458944 - RF_0552 - hypothetical protein 553 29.85 0 590865..593390 - 841 67458945 asmA RF_0553 - Outer membrane assembly protein 554 29.84 0 593667..594611 + 314 67458946 - RF_0554 - transposase 555 26.71 -1 594617..595114 - 165 67458947 rimM RF_0555 - 16S rRNA-processing protein 556 26.27 -1 595177..597810 + 877 67458948 - RF_0556 - hypothetical protein 557 32.51 0 597824..598066 + 80 67458949 xseB RF_0557 - exodeoxyribonuclease VII small subunit 558 33.05 0 598139..598486 + 115 67458950 - RF_0558 - hypothetical protein 559 31.95 0 598513..598947 + 144 67458951 - RF_0559 - hypothetical protein 560 35.39 0 599076..599609 - 177 67458952 mpg RF_0560 - 3-methyladenine DNA glycosylase 561 23.43 -2 599602..599904 - 100 67458953 - RF_0561 - hypothetical protein 562 31.73 0 599908..600156 - 82 67458954 - RF_0562 - hypothetical protein 563 34.13 0 600265..600768 - 167 67458955 nuoE RF_0563 - NADH dehydrogenase subunit E 564 38.69 +1 600944..602119 - 391 67458956 nuoD RF_0564 - NADH dehydrogenase subunit D 565 34.29 0 602257..602880 - 207 67458957 nuoC RF_0565 - NADH dehydrogenase subunit C 566 41.90 +2 602858..603382 - 174 67458958 nuoB RF_0566 - NADH dehydrogenase subunit B 567 32.26 0 603387..603758 - 123 67458959 nuoA RF_0567 - NADH dehydrogenase subunit A 568 32.03 0 603910..605133 - 407 67458960 - RF_0568 - hypothetical protein 569 28.90 0 605134..605607 - 157 67458961 - RF_0569 - hypothetical protein 570 33.73 0 605932..607191 + 419 67458962 - RF_0570 - Phage uncharacterized protein 571 32.68 0 607594..608514 + 306 67458963 xerD RF_0571 - site-specific tyrosine recombinase XerD 572 26.61 -1 608597..609667 + 356 67458964 - RF_0572 - hypothetical protein 573 27.88 -1 609779..609943 + 54 67458965 - RF_0573 - hypothetical protein 574 25.67 -1 610000..610821 + 273 67458966 - RF_0574 - hypothetical protein 575 34.99 0 611288..612070 - 260 67458967 fabI RF_0575 - enoyl-(acyl carrier protein) reductase 576 30.11 0 612146..613636 + 496 67458968 lnt RF_0576 - apolipoprotein N-acyltransferase 577 27.44 -1 613769..614260 + 163 67458969 - RF_0577 - hypothetical protein 578 33.21 0 615504..616301 + 265 67458970 - RF_0578 - hypothetical protein 32.00 MEAN 3.85 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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