version 1.0
Rhodobacter sphaeroides ATCC 17025, complete genome - 1..3217726 3111 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 271 66.09 0 265086..266978 - 630 146276329 - Rsph17025_0273 - AMP-dependent synthetase and ligase 272 68.42 0 267140..269419 - 759 146276330 - Rsph17025_0274 - malic enzyme 273 71.50 0 269585..269977 + 130 146276331 - Rsph17025_0275 - cytidine deaminase 274 71.94 +1 269979..271286 + 435 146276332 deoA Rsph17025_0276 - thymidine phosphorylase 275 72.77 +1 271286..272482 + 398 146276333 - Rsph17025_0277 - phosphopentomutase 276 68.60 0 272479..273462 + 327 146276334 - Rsph17025_0278 - adenosine deaminase 277 63.51 -1 273455..274087 + 210 146276335 - Rsph17025_0279 - uracil phosphoribosyltransferase 278 75.78 +2 274153..275085 + 310 146276336 - Rsph17025_0280 - sporulation domain-containing protein 279 70.49 0 275207..276226 - 339 146276337 - Rsph17025_0281 - hypothetical protein 280 67.15 0 276310..277956 - 548 146276338 - Rsph17025_0282 - AMP-dependent synthetase and ligase 281 70.63 0 278056..278988 + 310 146276339 - Rsph17025_0283 - hypothetical protein 282 71.90 +1 279006..279635 - 209 146276340 - Rsph17025_0284 - methyltransferase type 11 283 70.43 0 279745..280647 - 300 146276341 - Rsph17025_0285 - GntR family transcriptional regulator 284 67.98 0 280769..281761 + 330 146276342 - Rsph17025_0286 - alcohol dehydrogenase 285 69.93 0 281852..283354 + 500 146276343 - Rsph17025_0287 - Altronate dehydratase 286 72.74 +1 283430..285223 + 597 146276344 - Rsph17025_0288 - integral membrane sensor signal transduction histidine kinase 287 73.33 +1 285220..286539 + 439 146276345 - Rsph17025_0289 - two component, sigma54 specific, Fis family transcriptional regulator 288 66.67 0 286749..287702 + 317 146276346 - Rsph17025_0290 - TRAP transporter solute receptor TAXI family protein 289 68.47 0 287812..289920 + 702 146276347 - Rsph17025_0291 - TRAP transporter, 4TM/12TM fusion protein 290 73.71 +1 289917..290285 + 122 146276348 - Rsph17025_0292 - hypothetical protein 291 69.79 0 290305..291585 - 426 146276349 - Rsph17025_0293 - guanine deaminase 292 68.26 0 291715..293094 + 459 146276350 - Rsph17025_0294 - magnesium transporter 293 72.87 +1 293091..293654 + 187 146276351 - Rsph17025_0295 - 5-formyltetrahydrofolate cyclo-ligase 294 65.37 0 293651..294961 - 436 146276352 - Rsph17025_0296 - ATPase with chaperone activity-like protein 295 66.67 0 294983..295474 - 163 146276353 - Rsph17025_0297 - hypothetical protein 296 66.78 0 295489..296334 - 281 146276354 - Rsph17025_0298 - hypothetical protein 297 68.08 0 296373..296939 - 188 146276355 - Rsph17025_0299 - TPR repeat-containing protein 298 66.26 0 296946..297917 - 323 146276356 - Rsph17025_0300 - type II secretion system protein 299 64.29 -1 297922..298890 - 322 146276357 - Rsph17025_0301 - type II secretion system protein 300 67.15 0 298898..300352 - 484 146276358 - Rsph17025_0302 - type II secretion system protein E 301 66.75 0 300373..301644 - 423 146276359 - Rsph17025_0303 - ATPase involved in chromosome partitioning-like protein 302 65.41 0 301864..302502 - 212 146276360 - Rsph17025_0304 - OmpA/MotB domain-containing protein 303 66.38 0 302506..303891 - 461 146276361 - Rsph17025_0305 - type II and III secretion system protein 304 71.43 0 304084..304965 - 293 146276362 - Rsph17025_0306 - lytic transglycosylase, catalytic 305 56.37 -2 305315..305518 + 67 146276363 - Rsph17025_0307 - hypothetical protein 306 57.35 -2 305685..305888 + 67 146276364 - Rsph17025_0308 - hypothetical protein 307 64.48 -1 305961..306785 + 274 146276365 - Rsph17025_0309 - Flp pilus assembly protein CpaB-like protein 308 68.04 0 307200..307490 + 96 146276366 - Rsph17025_0310 - hypothetical protein 309 60.89 -2 307708..307932 + 74 146276367 - Rsph17025_0311 - hypothetical protein 310 66.78 0 308315..309178 + 287 146276368 - Rsph17025_0313 - hypothetical protein 311 67.04 0 309303..310115 - 270 146276369 - Rsph17025_0314 - transposase 312 67.85 0 311797..312303 + 168 146276370 - Rsph17025_0316 - hypothetical protein 313 62.04 -1 312309..312632 + 107 146276371 - Rsph17025_0317 - hypothetical protein 314 64.58 -1 313952..314335 + 127 146276372 - Rsph17025_0320 - hypothetical protein 315 69.94 0 314742..315749 + 335 146276373 - Rsph17025_0321 - tRNA-dihydrouridine synthase A 316 70.09 0 315835..316653 + 272 146276374 - Rsph17025_0322 - hypothetical protein 317 67.00 0 316811..318301 - 496 146276375 - Rsph17025_0323 - replicative DNA helicase 318 68.38 0 318570..319268 - 232 146276376 pyrE Rsph17025_0324 - orotate phosphoribosyltransferase 319 71.47 0 319311..320351 - 346 146276377 - Rsph17025_0325 - dihydroorotase 320 74.05 +1 320448..320975 + 175 146276378 - Rsph17025_0326 - metal dependent phosphohydrolase 321 70.05 0 321139..322053 + 304 146276379 - Rsph17025_0327 - ATPase 322 72.35 +1 322158..323354 + 398 146276380 - Rsph17025_0328 - VWA containing CoxE family protein 323 71.10 0 323496..323924 + 142 146276381 - Rsph17025_0329 - hypothetical protein 324 72.64 +1 324174..326366 + 730 146276382 - Rsph17025_0330 - OmpA/MotB domain-containing protein 325 73.25 +1 326455..327426 + 323 146276383 - Rsph17025_0331 - hypothetical protein 326 74.48 +1 327426..328436 + 336 146276384 - Rsph17025_0332 - molybdopterin binding domain-containing protein 327 63.59 -1 328481..329065 - 194 146276385 infC Rsph17025_0333 - translation initiation factor IF-3 328 75.16 +1 329188..329823 + 211 146276386 - Rsph17025_0334 - hypothetical protein 329 65.30 0 329915..330721 - 268 146276387 - Rsph17025_0335 - oxidoreductase FAD-binding subunit 330 68.14 0 330784..331191 - 135 146276388 - Rsph17025_0336 - hypothetical protein 331 68.39 0 331188..331943 - 251 146276389 - Rsph17025_0337 - phosphoadenosine phosphosulfate reductase 332 66.25 0 331933..333603 - 556 146276390 - Rsph17025_0338 - nitrite/sulfite reductase hemoprotein beta subunit 333 70.26 0 333622..333927 - 101 146276391 - Rsph17025_0339 - hypothetical protein 334 71.32 0 333924..334697 - 257 146276392 - Rsph17025_0340 - uroporphyrin-III C-methyltransferase 335 64.29 -1 334831..335292 + 153 146276393 - Rsph17025_0341 - AsnC family transcriptional regulator 336 70.92 0 335399..336622 - 407 146276394 - Rsph17025_0342 - cytochrome P450 337 71.68 0 336878..337615 - 245 146276395 - Rsph17025_0343 - Triose-phosphate isomerase 338 63.87 -1 337684..338040 - 118 146276396 - Rsph17025_0344 - iron-sulfur cluster assembly accessory protein 339 63.36 -1 338161..338523 - 120 146276397 - Rsph17025_0345 - hypothetical protein 340 70.09 0 338715..339971 + 418 146276398 - Rsph17025_0346 - metallophosphoesterase 341 73.76 +1 339971..343354 + 1127 146276399 - Rsph17025_0347 - hypothetical protein 342 68.31 0 343399..344496 - 365 146276400 - Rsph17025_0348 - translation-associated GTPase 343 70.45 0 344766..345557 + 263 146276401 trpA Rsph17025_0349 - tryptophan synthase subunit alpha 344 66.84 0 345785..346948 + 387 146276402 - Rsph17025_0350 - L-lactate dehydrogenase (cytochrome) 345 63.56 -1 347086..347697 + 203 146276403 - Rsph17025_0351 - 50S ribosomal protein L25/general stress protein Ctc 346 69.76 0 347844..348521 + 225 146276404 - Rsph17025_0352 - peptidyl-tRNA hydrolase 347 70.33 0 348531..349295 - 254 146276405 ppnK Rsph17025_0353 - inorganic polyphosphate/ATP-NAD kinase 348 68.36 0 349462..350757 + 431 146276406 - Rsph17025_0354 - serine hydroxymethyltransferase 349 70.97 0 350797..351168 - 123 146276407 - Rsph17025_0355 - hypothetical protein 350 69.78 0 351262..352032 + 256 146276408 - Rsph17025_0356 - alpha/beta hydrolase fold 351 64.12 -1 352071..352580 - 169 146276409 - Rsph17025_0357 - cytochrome B561 352 61.02 -2 352610..352786 - 58 146276410 - Rsph17025_0358 - hypothetical protein 353 69.82 0 353146..354507 - 453 146276411 - Rsph17025_0359 - DEAD/DEAH box helicase domain-containing protein 354 67.90 0 354767..355498 - 243 146276412 - Rsph17025_0360 - hemolysin-type calcium-binding region 355 67.33 0 355681..359010 - 1109 146276413 carB Rsph17025_0361 - carbamoyl phosphate synthase large subunit 356 70.50 0 359165..360337 + 390 146276414 - Rsph17025_0362 - para-aminobenzoate synthase component I 357 74.04 +1 360280..360957 + 225 146276415 - Rsph17025_0363 - hypothetical protein 358 67.74 0 360997..361650 + 217 146276416 - Rsph17025_0364 - abortive infection protein 359 66.50 0 361831..363606 + 591 146276417 aspS Rsph17025_0365 - aspartyl-tRNA synthetase 360 69.93 0 363610..364314 + 234 146276418 - Rsph17025_0366 - GCN5-related N-acetyltransferase 361 72.56 +1 364325..365020 - 231 146276419 - Rsph17025_0367 - response regulator receiver protein 362 65.43 0 365171..365575 + 134 146276420 - Rsph17025_0368 - methylmalonyl-CoA epimerase 363 68.79 0 365572..365853 + 93 146276421 - Rsph17025_0369 - hypothetical protein 364 67.82 0 365894..366589 - 231 146276422 - Rsph17025_0370 - hypothetical protein 365 72.37 +1 366586..367164 - 192 146276423 - Rsph17025_0371 - nitroreductase 366 64.53 -1 367423..369012 + 529 146276424 - Rsph17025_0372 - extracellular solute-binding protein 367 67.69 0 369013..370083 + 356 146276425 - Rsph17025_0373 - binding-protein-dependent transport systems inner membrane component 368 70.87 0 370080..370982 + 300 146276426 - Rsph17025_0374 - binding-protein-dependent transport systems inner membrane component 369 71.03 0 371104..371928 + 274 146276427 - Rsph17025_0375 - ABC transporter related 370 71.43 0 371928..372683 + 251 146276428 - Rsph17025_0376 - ABC transporter related 68.34 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
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