version 1.0
Rhodobacter sphaeroides ATCC 17025, complete genome - 1..3217726 3111 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2544 72.97 +1 2610335..2611048 - 237 146278602 recO Rsph17025_2568 - DNA repair protein RecO 2545 71.73 0 2611073..2611408 - 111 146278603 - Rsph17025_2569 - hypothetical protein 2546 68.74 0 2611405..2612319 - 304 146278604 era Rsph17025_2570 - GTP-binding protein Era 2547 72.32 +1 2612312..2613001 - 229 146278605 - Rsph17025_2571 - ribonuclease III 2548 63.88 -1 2612998..2613786 - 262 146278606 - Rsph17025_2572 - signal peptidase I 2549 69.32 0 2613856..2614269 - 137 146278607 acpS Rsph17025_2573 - 4'-phosphopantetheinyl transferase 2550 71.20 0 2614292..2615041 - 249 146278608 - Rsph17025_2574 - pyridoxal phosphate biosynthetic protein PdxJ 2551 65.60 0 2615087..2615743 - 218 146278609 - Rsph17025_2575 - hypothetical protein 2552 65.44 0 2615762..2617879 - 705 146278610 - Rsph17025_2576 - (p)ppGpp synthetase I, SpoT/RelA 2553 64.69 -1 2617910..2618263 - 117 146278611 - Rsph17025_2577 - DNA-directed RNA polymerase subunit omega 2554 65.92 0 2618347..2618883 - 178 146278612 - Rsph17025_2578 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 2555 62.83 -1 2619074..2619646 + 190 146278613 - Rsph17025_2579 - hypothetical protein 2556 68.12 0 2619775..2620734 + 319 146278614 - Rsph17025_2580 - hydroxymethylbutenyl pyrophosphate reductase 2557 67.33 0 2620752..2621204 + 150 146278615 - Rsph17025_2581 - hypothetical protein 2558 67.92 0 2621211..2622248 - 345 146278616 - Rsph17025_2582 - alanine racemase 2559 68.55 0 2622959..2623330 + 123 146278617 - Rsph17025_2583 - hypothetical protein 2560 75.81 +2 2623327..2624310 + 327 146278618 - Rsph17025_2584 - peptidase S49 2561 58.50 -2 2624372..2624824 - 150 146278619 - Rsph17025_2585 - GCN5-related N-acetyltransferase 2562 68.40 0 2625468..2625698 + 76 146278620 - Rsph17025_2586 - hypothetical protein 2563 72.03 +1 2626307..2626567 + 86 146278621 - Rsph17025_2587 - hypothetical protein 2564 69.92 0 2626569..2628473 + 634 146278622 - Rsph17025_2588 - Ig family protein 2565 64.24 -1 2628657..2628944 + 95 146278623 - Rsph17025_2589 - hypothetical protein 2566 69.02 0 2628935..2631358 + 807 146278624 - Rsph17025_2590 - hypothetical protein 2567 65.77 0 2631387..2632163 - 258 146278625 - Rsph17025_2591 - enoyl-CoA hydratase/isomerase 2568 70.42 0 2632224..2633075 - 283 146278626 - Rsph17025_2592 - formamidopyrimidine-DNA glycosylase 2569 63.61 -1 2633169..2633921 + 250 146278627 - Rsph17025_2593 - ubiquinone/menaquinone biosynthesis methyltransferase 2570 68.04 0 2633923..2635452 + 509 146278628 - Rsph17025_2594 - 2-polyprenylphenol 6-hydroxylase 2571 68.49 0 2635447..2636103 - 218 146278629 flgD Rsph17025_2595 - flagellar basal body rod modification protein 2572 71.29 0 2636112..2637128 - 338 146278630 - Rsph17025_2596 - hypothetical protein 2573 65.59 0 2638484..2638762 + 92 146278631 - Rsph17025_2597 - hypothetical protein 2574 71.68 0 2638752..2639090 + 112 146278632 - Rsph17025_2598 - hypothetical protein 2575 69.26 0 2639101..2640411 - 436 146278633 - Rsph17025_2599 - FliI/YscN family ATPase 2576 67.45 0 2640495..2640878 + 127 146278634 flgB Rsph17025_2600 - flagellar basal body rod protein FlgB 2577 63.78 -1 2640881..2641261 + 126 146278635 flgC Rsph17025_2601 - flagellar basal body rod protein FlgC 2578 69.76 0 2641275..2641565 + 96 146278636 fliE Rsph17025_2602 - flagellar hook-basal body protein FliE 2579 65.17 0 2641565..2641831 + 88 146278637 - Rsph17025_2603 - export protein FliQ 2580 67.50 0 2641833..2642552 + 239 146278638 flgF Rsph17025_2604 - flagellar basal body rod protein FlgF 2581 66.92 0 2642549..2643334 + 261 146278639 flgG Rsph17025_2605 - flagellar basal body rod protein FlgG 2582 70.71 0 2643334..2643753 + 139 146278640 flgA Rsph17025_2606 - flagellar basal body P-ring biosynthesis protein FlgA 2583 66.94 0 2643764..2644483 + 239 146278641 flgH Rsph17025_2607 - flagellar basal body L-ring protein 2584 60.30 -2 2644641..2645237 - 198 146278642 - Rsph17025_2608 - hypothetical protein 2585 64.40 -1 2645587..2646555 - 322 146278643 - Rsph17025_2610 - transposase, IS4 family protein 2586 66.11 0 2647135..2648214 - 359 146278644 flhB Rsph17025_2611 - flagellar biosynthesis protein FlhB 2587 68.47 0 2648211..2648987 - 258 146278645 - Rsph17025_2612 - type III secretion system inner membrane R protein 2588 67.34 0 2648984..2651053 - 689 146278646 flhA Rsph17025_2613 - flagellar biosynthesis protein FlhA 2589 69.71 0 2651058..2651747 - 229 146278647 - Rsph17025_2614 - lytic transglycosylase, catalytic 2590 65.75 0 2651898..2653199 - 433 146278648 - Rsph17025_2615 - xylose isomerase 2591 73.00 +1 2653196..2654632 - 478 146278649 - Rsph17025_2616 - xylulokinase 2592 65.77 0 2654633..2655415 - 260 146278650 - Rsph17025_2617 - ABC transporter related 2593 67.74 0 2655412..2656710 - 432 146278651 - Rsph17025_2618 - inner-membrane translocator 2594 67.93 0 2656789..2657814 - 341 146278652 - Rsph17025_2619 - D-xylose ABC transporter, periplasmic substrate-binding protein 2595 71.36 0 2658009..2659286 + 425 146278653 - Rsph17025_2620 - ROK family protein 2596 69.00 0 2659415..2661298 + 627 146278654 - Rsph17025_2621 - surface antigen (D15) 2597 70.63 0 2661298..2665128 + 1276 146278655 - Rsph17025_2622 - hypothetical protein 2598 67.98 0 2665132..2665968 - 278 146278656 - Rsph17025_2623 - putative ribonuclease BN 2599 66.24 0 2666043..2666276 - 77 146278657 - Rsph17025_2624 - hypothetical protein 2600 62.42 -1 2666361..2667020 - 219 146278658 - Rsph17025_2625 - hypothetical protein 2601 65.97 0 2667017..2669179 - 720 146278659 - Rsph17025_2626 - protein of unknown function DUF940, membrane lipoprotein putative 2602 65.39 0 2669273..2671159 - 628 146278660 - Rsph17025_2627 - polysaccharide biosynthesis protein CapD 2603 63.72 -1 2671306..2671950 - 214 146278661 - Rsph17025_2628 - sugar transferase 2604 75.18 +1 2671947..2672780 - 277 146278662 - Rsph17025_2629 - NAD-dependent epimerase/dehydratase 2605 69.37 0 2672781..2673224 - 147 146278663 - Rsph17025_2630 - MarR family transcriptional regulator 2606 70.28 0 2673224..2674054 - 276 146278664 - Rsph17025_2631 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2607 69.77 0 2674061..2674318 - 85 146278665 - Rsph17025_2632 - glutaredoxin 3 2608 70.82 0 2674354..2675076 - 240 146278666 - Rsph17025_2633 - amidophosphoribosyltransferase-like protein 2609 71.79 0 2675108..2675926 + 272 146278667 - Rsph17025_2634 - hypothetical protein 2610 64.73 -1 2675964..2677097 + 377 146278668 hemH Rsph17025_2635 - ferrochelatase 2611 66.67 0 2677163..2677357 + 64 146278669 - Rsph17025_2636 - hypothetical protein 2612 67.28 0 2677499..2678149 - 216 146278670 - Rsph17025_2637 - ErfK/YbiS/YcfS/YnhG family protein 2613 68.89 0 2678280..2678819 + 179 146278671 - Rsph17025_2638 - Allergen V5/Tpx-1 family protein 2614 61.41 -1 2678867..2679361 - 164 146278672 - Rsph17025_2639 - ErfK/YbiS/YcfS/YnhG family protein 2615 74.24 +1 2679475..2680689 - 404 146278673 - Rsph17025_2640 - SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase-like protein 2616 69.27 0 2680686..2682530 - 614 146278674 - Rsph17025_2641 - ABC transporter related 2617 68.78 0 2682527..2684371 - 614 146278675 - Rsph17025_2642 - ABC transporter related 2618 74.72 +1 2684436..2685578 - 380 146278676 - Rsph17025_2643 - polynucleotide adenylyltransferase region 2619 71.60 0 2685575..2686162 - 195 146278677 - Rsph17025_2644 - NUDIX hydrolase 2620 67.58 0 2686155..2687144 - 329 146278678 - Rsph17025_2645 - Hsp33 protein 2621 69.63 0 2687217..2687654 + 145 146278679 - Rsph17025_2646 - NUDIX hydrolase 2622 68.02 0 2687676..2688932 - 418 146278680 - Rsph17025_2647 - response regulator receiver protein 2623 65.81 0 2689119..2689469 + 116 146278681 - Rsph17025_2648 - Hpt protein 2624 68.27 0 2689432..2690679 - 415 146278682 - Rsph17025_2649 - threonine dehydratase 2625 64.87 0 2690798..2692024 + 408 146278683 - Rsph17025_2650 - argininosuccinate synthase 2626 71.32 0 2692097..2692762 + 221 146278684 - Rsph17025_2651 - hypothetical protein 2627 67.50 0 2692752..2693474 - 240 146278685 - Rsph17025_2652 - hypothetical protein 2628 65.11 0 2693471..2694370 - 299 146278686 - Rsph17025_2653 - aminotransferase, class IV 2629 66.71 0 2694478..2696733 - 751 146278687 - Rsph17025_2654 - malic enzyme 2630 70.77 0 2696862..2699492 + 876 146278688 - Rsph17025_2655 - DNA mismatch repair protein 2631 69.34 0 2699586..2700146 - 186 146278689 - Rsph17025_2656 - GrpE protein 2632 66.67 0 2700152..2701204 - 350 146278690 hrcA Rsph17025_2657 - heat-inducible transcription repressor 2633 69.19 0 2701355..2702068 + 237 146278691 - Rsph17025_2658 - ribonuclease PH 2634 67.32 0 2702065..2702676 + 203 146278692 - Rsph17025_2659 - putative deoxyribonucleotide triphosphate pyrophosphatase 2635 66.13 0 2702673..2703047 + 124 146278693 - Rsph17025_2660 - endoribonuclease L-PSP 2636 67.44 0 2703050..2704207 + 385 146278694 - Rsph17025_2661 - coproporphyrinogen III oxidase 2637 66.67 0 2704209..2704562 + 117 146278695 - Rsph17025_2662 - hypothetical protein 2638 65.23 0 2704537..2705439 - 300 146278696 - Rsph17025_2663 - parB-like partition protein 2639 62.29 -1 2705442..2706263 - 273 146278697 - Rsph17025_2664 - cobyrinic acid a,c-diamide synthase 2640 61.72 -1 2706256..2706882 - 208 146278698 - Rsph17025_2665 - methyltransferase GidB 2641 62.45 -1 2706879..2708753 - 624 146278699 - Rsph17025_2666 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 2642 65.81 0 2708756..2710042 - 428 146278700 trmE Rsph17025_2667 - tRNA modification GTPase TrmE 2643 63.44 -1 2710069..2711337 - 422 146278701 rho Rsph17025_2668 - transcription termination factor Rho 68.34 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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