version 1.0
Rhodobacter sphaeroides ATCC 17025, complete genome - 1..3217726 3111 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2470 70.68 0 2542506..2543777 + 423 146278528 - Rsph17025_2494 - succinyl-diaminopimelate desuccinylase 2471 71.53 0 2543823..2544665 - 280 146278529 - Rsph17025_2495 - pantoate--beta-alanine ligase 2472 68.94 0 2544662..2545495 - 277 146278530 panB Rsph17025_2496 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2473 68.91 0 2545620..2546423 - 267 146278531 - Rsph17025_2497 - ErfK/YbiS/YcfS/YnhG family protein 2474 65.92 0 2546549..2547754 - 401 146278532 - Rsph17025_2498 - peptidase M24 2475 62.60 -1 2547993..2548361 - 122 146278533 - Rsph17025_2499 - ferredoxin 2476 62.23 -1 2548595..2549383 - 262 146278534 - Rsph17025_2500 - ABC transporter related 2477 66.33 0 2549393..2550571 - 392 146278535 - Rsph17025_2501 - polar amino acid ABC transporter, inner membrane subunit 2478 65.08 0 2550724..2551986 - 420 146278536 - Rsph17025_2502 - polar amino acid ABC transporter, inner membrane subunit 2479 66.76 0 2552130..2553146 - 338 146278537 - Rsph17025_2503 - cationic amino acid ABC transporter, periplasmic binding protein 2480 71.89 +1 2553376..2554083 - 235 146278538 - Rsph17025_2504 - ATP12 ATPase 2481 68.49 0 2554083..2555123 - 346 146278539 - Rsph17025_2505 - RluA family pseudouridine synthase 2482 68.72 0 2555337..2556650 - 437 146278540 - Rsph17025_2506 - recombination factor protein RarA 2483 69.70 0 2556689..2558074 - 461 146278541 - Rsph17025_2507 - protease Do 2484 62.25 -1 2558128..2558739 - 203 146278542 - Rsph17025_2508 - response regulator receiver protein 2485 67.38 0 2559006..2559425 - 139 146278543 rplQ Rsph17025_2509 - 50S ribosomal protein L17 2486 63.82 -1 2559523..2560539 - 338 146278544 - Rsph17025_2510 - DNA-directed RNA polymerase subunit alpha 2487 65.13 0 2560655..2561044 - 129 146278545 - Rsph17025_2511 - 30S ribosomal protein S11 2488 65.04 0 2561059..2561427 - 122 146278546 rpsM Rsph17025_2512 - 30S ribosomal protein S13 2489 65.75 0 2561604..2562257 - 217 146278547 - Rsph17025_2513 - adenylate kinase 2490 63.28 -1 2562268..2563626 - 452 146278548 secY Rsph17025_2514 - preprotein translocase subunit SecY 2491 68.12 0 2563727..2564209 - 160 146278549 rplO Rsph17025_2515 - 50S ribosomal protein L15 2492 65.61 0 2564366..2564554 - 62 146278550 rpmD Rsph17025_2516 - 50S ribosomal protein L30 2493 67.20 0 2564567..2565130 - 187 146278551 rpsE Rsph17025_2517 - 30S ribosomal protein S5 2494 65.56 0 2565142..2565501 - 119 146278552 rplR Rsph17025_2518 - 50S ribosomal protein L18 2495 65.54 0 2565513..2566046 - 177 146278553 rplF Rsph17025_2519 - 50S ribosomal protein L6 2496 64.66 -1 2566057..2566455 - 132 146278554 rpsH Rsph17025_2520 - 30S ribosomal protein S8 2497 60.78 -2 2566468..2566773 - 101 146278555 rpsN Rsph17025_2521 - 30S ribosomal protein S14 2498 61.68 -1 2566793..2567353 - 186 146278556 rplE Rsph17025_2522 - 50S ribosomal protein L5 2499 64.38 -1 2567353..2567658 - 101 146278557 rplX Rsph17025_2523 - 50S ribosomal protein L24 2500 63.14 -1 2567658..2568026 - 122 146278558 rplN Rsph17025_2524 - 50S ribosomal protein L14 2501 61.73 -1 2568100..2568342 - 80 146278559 rpsQ Rsph17025_2525 - 30S ribosomal protein S17 2502 66.67 0 2568356..2568559 - 67 146278560 - Rsph17025_2526 - 50S ribosomal protein L29 2503 65.46 0 2568798..2569211 - 137 146278561 rplP Rsph17025_2527 - 50S ribosomal protein L16 2504 66.11 0 2569224..2569940 - 238 146278562 rpsC Rsph17025_2528 - 30S ribosomal protein S3 2505 62.20 -1 2569940..2570320 - 126 146278563 rplV Rsph17025_2529 - 50S ribosomal protein L22 2506 57.71 -2 2570324..2570602 - 92 146278564 rpsS Rsph17025_2530 - 30S ribosomal protein S19 2507 67.02 0 2570606..2571445 - 279 146278565 rplB Rsph17025_2531 - 50S ribosomal protein L2 2508 60.61 -2 2571568..2571864 - 98 146278566 rplW Rsph17025_2532 - 50S ribosomal protein L23 2509 64.57 -1 2571861..2572481 - 206 146278567 rplD Rsph17025_2533 - 50S ribosomal protein L4 2510 66.39 0 2572471..2573190 - 239 146278568 rplC Rsph17025_2534 - 50S ribosomal protein L3 2511 62.14 -1 2573204..2573512 - 102 146278569 rpsJ Rsph17025_2535 - 30S ribosomal protein S10 2512 64.46 -1 2573585..2574760 - 391 146278570 - Rsph17025_2536 - elongation factor Tu 2513 64.21 -1 2574835..2576952 - 705 146278571 - Rsph17025_2537 - elongation factor G 2514 63.91 -1 2576978..2577448 - 156 146278572 - Rsph17025_2538 - 30S ribosomal protein S7 2515 62.10 -1 2577461..2577832 - 123 146278573 rpsL Rsph17025_2539 - 30S ribosomal protein S12 2516 68.50 0 2578045..2578971 - 308 146278574 - Rsph17025_2540 - hypothetical protein 2517 64.81 -1 2579147..2583394 - 1415 146278575 - Rsph17025_2541 - DNA-directed RNA polymerase subunit beta' 2518 65.26 0 2583476..2587609 - 1377 146278576 rpoB Rsph17025_2542 - DNA-directed RNA polymerase subunit beta 2519 61.60 -1 2587855..2588229 - 124 146278577 rplL Rsph17025_2543 - 50S ribosomal protein L7/L12 2520 63.76 -1 2588299..2588814 - 171 146278578 rplJ Rsph17025_2544 - 50S ribosomal protein L10 2521 66.95 0 2589051..2589749 - 232 146278579 rplA Rsph17025_2545 - 50S ribosomal protein L1 2522 65.12 0 2589753..2590205 - 150 146278580 rplK Rsph17025_2546 - 50S ribosomal protein L11 2523 63.50 -1 2590298..2590834 - 178 146278581 - Rsph17025_2547 - NusG antitermination factor 2524 62.56 -1 2590996..2591190 - 64 146278582 secE Rsph17025_2548 - preprotein translocase subunit SecE 2525 64.46 -1 2591531..2592706 - 391 146278583 - Rsph17025_2549 - elongation factor Tu 2526 66.15 0 2592808..2593383 - 191 146278584 - Rsph17025_2550 - hypothetical protein 2527 68.27 0 2593532..2595835 - 767 146278585 - Rsph17025_2551 - DNA topoisomerase IV subunit A 2528 73.93 +1 2595968..2596504 + 178 146278586 - Rsph17025_2552 - SH3 type 3 domain-containing protein 2529 69.98 0 2596593..2597408 + 271 146278587 - Rsph17025_2553 - short-chain dehydrogenase/reductase SDR 2530 62.86 -1 2597535..2597744 + 69 146278588 - Rsph17025_2554 - hypothetical protein 2531 69.08 0 2597745..2598323 + 192 146278589 - Rsph17025_2555 - ATP--cobalamin adenosyltransferase 2532 65.49 0 2598454..2599215 + 253 146278590 - Rsph17025_2556 - electron transfer flavoprotein beta-subunit 2533 69.36 0 2599215..2600141 + 308 146278591 - Rsph17025_2557 - electron transfer flavoprotein, alpha subunit 2534 67.03 0 2600190..2601014 - 274 146278592 - Rsph17025_2558 - hypothetical protein 2535 63.81 -1 2601183..2602058 + 291 146278593 - Rsph17025_2559 - 3-hydroxybutyryl-CoA dehydrogenase 2536 65.19 0 2602071..2602340 - 89 146278594 - Rsph17025_2560 - phosphotransferase system, phosphocarrier protein HPr 2537 67.42 0 2602337..2602735 - 132 146278595 - Rsph17025_2561 - PTS system fructose subfamily IIA component 2538 67.55 0 2602732..2603640 - 302 146278596 - Rsph17025_2562 - hypothetical protein 2539 67.60 0 2603662..2604090 - 142 146278597 - Rsph17025_2563 - HPr kinase 2540 67.57 0 2604087..2605739 - 550 146278598 - Rsph17025_2564 - integral membrane sensor signal transduction histidine kinase 2541 62.70 -1 2605927..2606556 + 209 146278599 - Rsph17025_2565 - hypothetical protein 2542 65.23 0 2606871..2608469 + 532 146278600 - Rsph17025_2566 - phosphoenolpyruvate carboxykinase 2543 67.57 0 2608635..2610302 + 555 146278601 - Rsph17025_2567 - acyl-CoA dehydrogenase domain-containing protein 2544 72.97 +1 2610335..2611048 - 237 146278602 recO Rsph17025_2568 - DNA repair protein RecO 2545 71.73 0 2611073..2611408 - 111 146278603 - Rsph17025_2569 - hypothetical protein 2546 68.74 0 2611405..2612319 - 304 146278604 era Rsph17025_2570 - GTP-binding protein Era 2547 72.32 +1 2612312..2613001 - 229 146278605 - Rsph17025_2571 - ribonuclease III 2548 63.88 -1 2612998..2613786 - 262 146278606 - Rsph17025_2572 - signal peptidase I 2549 69.32 0 2613856..2614269 - 137 146278607 acpS Rsph17025_2573 - 4'-phosphopantetheinyl transferase 2550 71.20 0 2614292..2615041 - 249 146278608 - Rsph17025_2574 - pyridoxal phosphate biosynthetic protein PdxJ 2551 65.60 0 2615087..2615743 - 218 146278609 - Rsph17025_2575 - hypothetical protein 2552 65.44 0 2615762..2617879 - 705 146278610 - Rsph17025_2576 - (p)ppGpp synthetase I, SpoT/RelA 2553 64.69 -1 2617910..2618263 - 117 146278611 - Rsph17025_2577 - DNA-directed RNA polymerase subunit omega 2554 65.92 0 2618347..2618883 - 178 146278612 - Rsph17025_2578 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 2555 62.83 -1 2619074..2619646 + 190 146278613 - Rsph17025_2579 - hypothetical protein 2556 68.12 0 2619775..2620734 + 319 146278614 - Rsph17025_2580 - hydroxymethylbutenyl pyrophosphate reductase 2557 67.33 0 2620752..2621204 + 150 146278615 - Rsph17025_2581 - hypothetical protein 2558 67.92 0 2621211..2622248 - 345 146278616 - Rsph17025_2582 - alanine racemase 2559 68.55 0 2622959..2623330 + 123 146278617 - Rsph17025_2583 - hypothetical protein 2560 75.81 +2 2623327..2624310 + 327 146278618 - Rsph17025_2584 - peptidase S49 2561 58.50 -2 2624372..2624824 - 150 146278619 - Rsph17025_2585 - GCN5-related N-acetyltransferase 2562 68.40 0 2625468..2625698 + 76 146278620 - Rsph17025_2586 - hypothetical protein 2563 72.03 +1 2626307..2626567 + 86 146278621 - Rsph17025_2587 - hypothetical protein 2564 69.92 0 2626569..2628473 + 634 146278622 - Rsph17025_2588 - Ig family protein 2565 64.24 -1 2628657..2628944 + 95 146278623 - Rsph17025_2589 - hypothetical protein 2566 69.02 0 2628935..2631358 + 807 146278624 - Rsph17025_2590 - hypothetical protein 2567 65.77 0 2631387..2632163 - 258 146278625 - Rsph17025_2591 - enoyl-CoA hydratase/isomerase 2568 70.42 0 2632224..2633075 - 283 146278626 - Rsph17025_2592 - formamidopyrimidine-DNA glycosylase 2569 63.61 -1 2633169..2633921 + 250 146278627 - Rsph17025_2593 - ubiquinone/menaquinone biosynthesis methyltransferase 68.34 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0