version 1.0
Rhodobacter sphaeroides ATCC 17025, complete genome - 1..3217726 3111 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2392 72.72 +1 2463215..2465164 - 649 146278450 - Rsph17025_2416 - hypothetical protein 2393 73.17 +1 2465489..2466703 + 404 146278451 - Rsph17025_2417 - peptidase S1 and S6, chymotrypsin/Hap 2394 73.99 +1 2466703..2467794 + 363 146278452 - Rsph17025_2418 - hypothetical protein 2395 70.91 0 2467798..2469093 + 431 146278453 - Rsph17025_2419 - hypothetical protein 2396 72.02 +1 2469090..2471498 + 802 146278454 - Rsph17025_2420 - DNA/RNA non-specific endonuclease 2397 72.18 +1 2471609..2472007 + 132 146278455 - Rsph17025_2421 - rhodanese domain-containing protein 2398 70.05 0 2472034..2472624 + 196 146278456 - Rsph17025_2422 - two component LuxR family transcriptional regulator 2399 72.43 +1 2472851..2474863 + 670 146278457 - Rsph17025_2423 - PAS/PAC sensor hybrid histidine kinase 2400 68.59 0 2474860..2476263 - 467 146278458 - Rsph17025_2424 - glycoside hydrolase family protein 2401 69.03 0 2476436..2477449 - 337 146278459 - Rsph17025_2425 - NAD-dependent epimerase/dehydratase 2402 71.96 +1 2477515..2478591 - 358 146278460 - Rsph17025_2426 - hypothetical protein 2403 71.34 0 2478588..2479679 - 363 146278461 - Rsph17025_2427 - hypothetical protein 2404 72.43 +1 2479679..2480788 - 369 146278462 - Rsph17025_2428 - hypothetical protein 2405 72.57 +1 2480790..2481890 - 366 146278463 - Rsph17025_2429 - glycosyl transferase, group 1 2406 71.00 0 2481887..2483896 - 669 146278464 - Rsph17025_2430 - NAD-dependent epimerase/dehydratase 2407 70.64 0 2483893..2484999 - 368 146278465 - Rsph17025_2431 - NAD-dependent epimerase/dehydratase 2408 70.29 0 2485094..2486224 + 376 146278466 - Rsph17025_2432 - alcohol dehydrogenase 2409 73.88 +1 2486215..2487240 + 341 146278467 - Rsph17025_2433 - oxidoreductase domain-containing protein 2410 67.55 0 2487247..2488041 + 264 146278468 - Rsph17025_2434 - Ku domain-containing protein 2411 71.46 0 2488328..2489329 - 333 146278469 - Rsph17025_2435 - alcohol dehydrogenase 2412 71.57 0 2489382..2490074 - 230 146278470 - Rsph17025_2436 - rpsU-divergently transcribed protein 2413 62.80 -1 2490271..2490477 + 68 146278471 rpsU Rsph17025_2437 - 30S ribosomal protein S21 2414 67.81 0 2490713..2491411 + 232 146278472 - Rsph17025_2438 - phosphatidylserine decarboxylase 2415 66.40 0 2491415..2492155 + 246 146278473 - Rsph17025_2439 - CDP-alcohol phosphatidyltransferase 2416 67.64 0 2492180..2492794 + 204 146278474 - Rsph17025_2440 - phosphatidylethanolamine N-methyltransferase 2417 66.67 0 2492849..2493307 - 152 146278475 - Rsph17025_2441 - AsnC family transcriptional regulator 2418 70.87 0 2493448..2494566 + 372 146278476 - Rsph17025_2442 - alanine dehydrogenase 2419 64.40 -1 2494591..2495031 - 146 146278477 - Rsph17025_2443 - large conductance mechanosensitive channel protein 2420 71.01 0 2495133..2495684 - 183 146278478 - Rsph17025_2444 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2421 70.13 0 2495706..2497121 + 471 146278479 - Rsph17025_2445 - argininosuccinate lyase 2422 72.60 +1 2497273..2497491 + 72 146278480 - Rsph17025_2446 - hypothetical protein 2423 65.41 0 2497493..2497810 + 105 146278481 - Rsph17025_2447 - hypothetical protein 2424 68.17 0 2497847..2499112 + 421 146278482 - Rsph17025_2448 - diaminopimelate decarboxylase 2425 72.44 +1 2499141..2501633 + 830 146278483 - Rsph17025_2449 - hypothetical protein 2426 75.75 +2 2501702..2502472 - 256 146278484 - Rsph17025_2450 - Zinc finger-domain-containing protein 2427 68.60 0 2502635..2503306 + 223 146278485 - Rsph17025_2451 - ABC transporter related 2428 73.75 +1 2503303..2504205 + 300 146278486 - Rsph17025_2452 - hypothetical protein 2429 67.08 0 2504205..2504930 + 241 146278487 - Rsph17025_2453 - phospholipid/glycerol acyltransferase 2430 71.24 0 2504945..2505535 - 196 146278488 - Rsph17025_2454 - GCN5-related N-acetyltransferase 2431 71.89 +1 2505532..2506890 - 452 146278489 - Rsph17025_2455 - molybdopterin-guanine dinucleotide biosynthesis protein B 2432 72.83 +1 2506887..2507486 - 199 146278490 - Rsph17025_2456 - molybdopterin-guanine dinucleotide biosynthesis protein A 2433 67.51 0 2507545..2508252 + 235 146278491 - Rsph17025_2457 - AzlC family protein 2434 71.47 0 2508249..2508581 + 110 146278492 - Rsph17025_2458 - branched-chain amino acid transport 2435 67.32 0 2508591..2509202 - 203 146278493 - Rsph17025_2459 - hypothetical protein 2436 63.44 -1 2509236..2509421 - 61 146278494 - Rsph17025_2460 - aa3 type cytochrome c oxidase subunit IV 2437 71.21 0 2509482..2510516 - 344 146278495 - Rsph17025_2461 - beta-lactamase domain-containing protein 2438 71.64 0 2510513..2512201 - 562 146278496 - Rsph17025_2462 - acyl-CoA dehydrogenase domain-containing protein 2439 76.14 +2 2512310..2513248 + 312 146278497 - Rsph17025_2463 - Sua5/YciO/YrdC/YwlC family protein 2440 66.15 0 2513255..2513833 - 192 146278498 - Rsph17025_2464 - DNA-3-methyladenine glycosylase I 2441 66.43 0 2513924..2514751 + 275 146278499 - Rsph17025_2465 - diguanylate phosphodiesterase 2442 68.54 0 2514893..2516068 + 391 146278500 - Rsph17025_2466 - acetyl-CoA acetyltransferase 2443 64.74 -1 2516167..2516892 + 241 146278501 - Rsph17025_2467 - acetoacetyl-CoA reductase 2444 57.67 -2 2517031..2517219 - 62 146278502 - Rsph17025_2468 - hypothetical protein 2445 71.81 +1 2517300..2518115 - 271 146278503 - Rsph17025_2469 - methyltransferase small 2446 68.76 0 2518331..2519332 + 333 146278504 - Rsph17025_2470 - polyprenyl synthetase 2447 73.95 +1 2519383..2520219 - 278 146278505 - Rsph17025_2471 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 2448 69.66 0 2520212..2521912 - 566 146278506 - Rsph17025_2472 - TPR repeat-containing protein 2449 65.46 0 2522012..2523667 - 551 146278507 - Rsph17025_2473 - electron-transferring-flavoprotein dehydrogenase 2450 64.33 -1 2523956..2524426 + 156 146278508 - Rsph17025_2474 - transcription elongation factor GreA 2451 70.66 0 2524437..2525387 + 316 146278509 - Rsph17025_2475 - hypothetical protein 2452 69.62 0 2525392..2526576 - 394 146278510 - Rsph17025_2476 - glucose sorbosone dehydrogenase 2453 71.38 0 2526680..2527252 - 190 146278511 - Rsph17025_2477 - hypothetical protein 2454 69.84 0 2527355..2527669 - 104 146278512 - Rsph17025_2478 - small multidrug resistance protein 2455 67.81 0 2527666..2528625 - 319 146278513 - Rsph17025_2479 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 2456 69.46 0 2528846..2529310 + 154 146278514 - Rsph17025_2480 - transcription activator, effector binding 2457 63.68 -1 2529401..2530540 - 379 146278515 - Rsph17025_2481 - citrate (pro-3S)-lyase 2458 69.66 0 2530626..2531627 + 333 146278516 - Rsph17025_2482 - hypothetical protein 2459 70.30 0 2531739..2532701 + 320 146278517 - Rsph17025_2483 - mandelate racemase/muconate lactonizing protein 2460 66.55 0 2532704..2533564 + 286 146278518 - Rsph17025_2484 - aminotransferase, class IV 2461 71.27 0 2533613..2534350 - 245 146278519 - Rsph17025_2485 - N-formylglutamate amidohydrolase 2462 69.92 0 2534491..2535936 + 481 146278520 - Rsph17025_2486 - pyruvate kinase 2463 60.70 -2 2536050..2536250 + 66 146278521 rpmI Rsph17025_2487 - 50S ribosomal protein L35 2464 68.32 0 2536263..2536625 + 120 146278522 rplT Rsph17025_2488 - 50S ribosomal protein L20 2465 68.55 0 2536681..2537847 + 388 146278523 - Rsph17025_2489 - phenylalanyl-tRNA synthetase, alpha subunit 2466 65.44 0 2537881..2538612 + 243 146278524 - Rsph17025_2490 - hypothetical protein 2467 70.72 0 2538945..2541362 + 805 146278525 pheT Rsph17025_2491 - phenylalanyl-tRNA synthetase subunit beta 2468 63.29 -1 2541457..2542107 - 216 146278526 - Rsph17025_2492 - hypothetical protein 2469 57.41 -2 2542115..2542384 - 89 146278527 - Rsph17025_2493 - hypothetical protein 2470 70.68 0 2542506..2543777 + 423 146278528 - Rsph17025_2494 - succinyl-diaminopimelate desuccinylase 2471 71.53 0 2543823..2544665 - 280 146278529 - Rsph17025_2495 - pantoate--beta-alanine ligase 2472 68.94 0 2544662..2545495 - 277 146278530 panB Rsph17025_2496 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2473 68.91 0 2545620..2546423 - 267 146278531 - Rsph17025_2497 - ErfK/YbiS/YcfS/YnhG family protein 2474 65.92 0 2546549..2547754 - 401 146278532 - Rsph17025_2498 - peptidase M24 2475 62.60 -1 2547993..2548361 - 122 146278533 - Rsph17025_2499 - ferredoxin 2476 62.23 -1 2548595..2549383 - 262 146278534 - Rsph17025_2500 - ABC transporter related 2477 66.33 0 2549393..2550571 - 392 146278535 - Rsph17025_2501 - polar amino acid ABC transporter, inner membrane subunit 2478 65.08 0 2550724..2551986 - 420 146278536 - Rsph17025_2502 - polar amino acid ABC transporter, inner membrane subunit 2479 66.76 0 2552130..2553146 - 338 146278537 - Rsph17025_2503 - cationic amino acid ABC transporter, periplasmic binding protein 2480 71.89 +1 2553376..2554083 - 235 146278538 - Rsph17025_2504 - ATP12 ATPase 2481 68.49 0 2554083..2555123 - 346 146278539 - Rsph17025_2505 - RluA family pseudouridine synthase 2482 68.72 0 2555337..2556650 - 437 146278540 - Rsph17025_2506 - recombination factor protein RarA 2483 69.70 0 2556689..2558074 - 461 146278541 - Rsph17025_2507 - protease Do 2484 62.25 -1 2558128..2558739 - 203 146278542 - Rsph17025_2508 - response regulator receiver protein 2485 67.38 0 2559006..2559425 - 139 146278543 rplQ Rsph17025_2509 - 50S ribosomal protein L17 2486 63.82 -1 2559523..2560539 - 338 146278544 - Rsph17025_2510 - DNA-directed RNA polymerase subunit alpha 2487 65.13 0 2560655..2561044 - 129 146278545 - Rsph17025_2511 - 30S ribosomal protein S11 2488 65.04 0 2561059..2561427 - 122 146278546 rpsM Rsph17025_2512 - 30S ribosomal protein S13 2489 65.75 0 2561604..2562257 - 217 146278547 - Rsph17025_2513 - adenylate kinase 2490 63.28 -1 2562268..2563626 - 452 146278548 secY Rsph17025_2514 - preprotein translocase subunit SecY 2491 68.12 0 2563727..2564209 - 160 146278549 rplO Rsph17025_2515 - 50S ribosomal protein L15 68.34 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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